Contig 013273:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G10Sequence632013273 (5)ref|XP_006351760.1|2e-41PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like717008622 (5)ref|XP_009602277.1|2e-66PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic
JMSF011C13Sequence298013273 (5)742008622 (5)ref|XP_009602277.1|3e-68PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic
JMSF014B08Sequence426013273 (5)760008622 (5)ref|XP_009602277.1|1e-61PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic
JMSF028A07Sequence713013273 (5)ref|XP_006351760.1|4e-38PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like738008622 (5)ref|XP_009602277.1|2e-72PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic
JMSF041L07Sequence745013273 (5)ref|XP_006351760.1|2e-64PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like629008622 (5)ref|XP_011087913.1|5e-44PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like

Alignment

This contig is upended


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JMSF041L07+ AGAAGCCAAGTTCAAGTGATA
                      ____________________________________________________________
consensus AGAAGCCAAGTTCAAGTGATA
 
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JMSF041L07+ CATAAGCAGCAATAAGAGTGCCTGTCCGGCTGCCAACTATGTTAACGACTGATTCTTTCT
                      ____________________________________________________________
consensus CATAAGCAGCAATAAGAGTGCCTGTCCGGCTGCCAACTATGTTAACGACTGATTCTTTCT
 
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JMFF008G10+ CTTAAGTTGAGCCATGTGA
JMSF028A07+ CTTAAGTTGAGCCATGTGA
JMSF041L07+ TATTCTTGTCTGCTCCTGTGTCAAAATCATAAACGTCGTTGCTTAAGTTGAGCCATGTGA
                      ____________________________________________________________
consensus TATTCTTGTCTGCTCCTGTGTCAAAATCATAAACGTCGTTGCTTAAGTTGAGCCATGTGA
 
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JMFF008G10+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
JMSF028A07+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
JMSF041L07+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
                      ____________________________________________________________
consensus TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
 
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JMFF008G10+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
JMSF028A07+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
JMSF041L07+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
                      ____________________________________________________________
consensus GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
 
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JMSF014B08+ TTCCTCATTGA
JMFF008G10+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
JMSF028A07+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
JMSF041L07+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
                      ____________________________________________________________
consensus GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
 
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JMSF014B08+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMFF008G10+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMSF028A07+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMSF041L07+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
                      ____________________________________________________________
consensus TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
 
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JMSF014B08+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMFF008G10+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMSF028A07+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMSF041L07+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
                      ____________________________________________________________
consensus TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
 
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JMSF014B08+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMFF008G10+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMSF028A07+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMSF041L07+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
                      ____________________________________________________________
consensus AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
 
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JMSF014B08+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMFF008G10+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF028A07+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF041L07+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF011C13+ CTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
                      ____________________________________________________________
consensus GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
 
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JMSF014B08+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMFF008G10+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF028A07+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF041L07+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF011C13+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
                      ____________________________________________________________
consensus AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
 
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JMSF014B08+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMFF008G10+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF028A07+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF041L07+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF011C13+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
                      ____________________________________________________________
consensus TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
 
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JMSF014B08+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGC
JMFF008G10+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
JMSF028A07+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTC
JMSF041L07+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
JMSF011C13+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
                      ____________________________________________________________
consensus GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
 
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JMFF008G10+ GC
JMSF041L07+ GC
JMSF011C13+ GCCAAGGCCAGAAAACGAAAACCTTTACCTTATCCATAAGCAAAAGGCTATTTTGTCCCC
                      ____________________________________________________________
consensus GCCAAGGCCAGAAAACGAAAACCTTTACCTTATCCATAAGCAAAAGGCTATTTTGTCCCC