clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF008G10 | Sequence | 632 | 013273 (5) | ref|XP_006351760.1| | 2e-41 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like | 717 | 008622 (5) | ref|XP_009602277.1| | 2e-66 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic |
JMSF011C13 | Sequence | 298 | 013273 (5) | 742 | 008622 (5) | ref|XP_009602277.1| | 3e-68 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic | |||
JMSF014B08 | Sequence | 426 | 013273 (5) | 760 | 008622 (5) | ref|XP_009602277.1| | 1e-61 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic | |||
JMSF028A07 | Sequence | 713 | 013273 (5) | ref|XP_006351760.1| | 4e-38 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like | 738 | 008622 (5) | ref|XP_009602277.1| | 2e-72 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic [Nic |
JMSF041L07 | Sequence | 745 | 013273 (5) | ref|XP_006351760.1| | 2e-64 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like | 629 | 008622 (5) | ref|XP_011087913.1| | 5e-44 | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like |
This contig is upended
. : . : . : . : . : . :
JMSF041L07+ AGAAGCCAAGTTCAAGTGATA
____________________________________________________________
consensus AGAAGCCAAGTTCAAGTGATA
. : . : . : . : . : . :
JMSF041L07+ CATAAGCAGCAATAAGAGTGCCTGTCCGGCTGCCAACTATGTTAACGACTGATTCTTTCT
____________________________________________________________
consensus CATAAGCAGCAATAAGAGTGCCTGTCCGGCTGCCAACTATGTTAACGACTGATTCTTTCT
. : . : . : . : . : . :
JMFF008G10+ CTTAAGTTGAGCCATGTGA
JMSF028A07+ CTTAAGTTGAGCCATGTGA
JMSF041L07+ TATTCTTGTCTGCTCCTGTGTCAAAATCATAAACGTCGTTGCTTAAGTTGAGCCATGTGA
____________________________________________________________
consensus TATTCTTGTCTGCTCCTGTGTCAAAATCATAAACGTCGTTGCTTAAGTTGAGCCATGTGA
. : . : . : . : . : . :
JMFF008G10+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
JMSF028A07+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
JMSF041L07+ TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
____________________________________________________________
consensus TGATAAGAACGGAGGAAGCTAAGAGCGCCAAGTAACGCGTGACAGAAAATAGGCCTGCTT
. : . : . : . : . : . :
JMFF008G10+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
JMSF028A07+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
JMSF041L07+ GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
____________________________________________________________
consensus GCAAATAGGCAGCTGCACTTCCTACAGTTAGAGGAACCAAGGCCACTGAATATATCGGAA
. : . : . : . : . : . :
JMSF014B08+ TTCCTCATTGA
JMFF008G10+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
JMSF028A07+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
JMSF041L07+ GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
____________________________________________________________
consensus GTTTCACTGCCCGCCAAATCAAAGTAGTTCTAGAAATATTTTCTTCCTTTTCCTCATTGA
. : . : . : . : . : . :
JMSF014B08+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMFF008G10+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMSF028A07+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
JMSF041L07+ TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
____________________________________________________________
consensus TAGCATCCGAATGCCGAGCTCTGCAAGAATAAAAATGCCTCGGGTGCTGGCATTGCCGCC
. : . : . : . : . : . :
JMSF014B08+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMFF008G10+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMSF028A07+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
JMSF041L07+ TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
____________________________________________________________
consensus TTGATTCTTGCCACCGTAAAGCACTCCAGCTGTTACATCTGTTTGTGCAACCGATACAGC
. : . : . : . : . : . :
JMSF014B08+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMFF008G10+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMSF028A07+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
JMSF041L07+ AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
____________________________________________________________
consensus AAAACGATCTATACACAGAATGTGGCAGCACTGAATTGATCGCGAAATCGAATTTTGTCA
. : . : . : . : . : . :
JMSF014B08+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMFF008G10+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF028A07+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF041L07+ GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
JMSF011C13+ CTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
____________________________________________________________
consensus GCCTAGAAAAGCTGTGCCCTTGATTATGGAAATAGCAGTAATTGACTTTACTGAAGCCGA
. : . : . : . : . : . :
JMSF014B08+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMFF008G10+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF028A07+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF041L07+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
JMSF011C13+ AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
____________________________________________________________
consensus AGCCAGGACCGCCATTAACAGAGCTACACAGTGCGGCGGCTGCCAGTGCCATCAACGACC
. : . : . : . : . : . :
JMSF014B08+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMFF008G10+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF028A07+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF041L07+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
JMSF011C13+ TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
____________________________________________________________
consensus TCCACCGCCACCGCCACCGCCACCGTTGAAATTTCAGGCTTTTACCACTTGATTGGGTCC
. : . : . : . : . : . :
JMSF014B08+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGC
JMFF008G10+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
JMSF028A07+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTC
JMSF041L07+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
JMSF011C13+ GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
____________________________________________________________
consensus GGGCACTTCAAATTCTTCGATATCTAACAATAAACCCCTCTTCAATTTTGCCTTGTCAAA
. : . : . : . : . : . :
JMFF008G10+ GC
JMSF041L07+ GC
JMSF011C13+ GCCAAGGCCAGAAAACGAAAACCTTTACCTTATCCATAAGCAAAAGGCTATTTTGTCCCC
____________________________________________________________
consensus GCCAAGGCCAGAAAACGAAAACCTTTACCTTATCCATAAGCAAAAGGCTATTTTGTCCCC