Contig 013269:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A15Sequence191013269 (3)448012295 (2)
JMSF010M17Sequence313013269 (3)756012295 (2)emb|CBI24277.3|6e-68unnamed protein product [Vitis vinifera]
JMSF018F05Sequence424013269 (3)703013399 (29)ref|XP_009804090.1|5e-69PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF018F05- AAGGGGGCTTTCTGAATTTCCTTGCC
                      ____________________________________________________________
consensus AAGGGGGCTTTCTGAATTTCCTTGCC
 
. : . : . : . : . : . :
JMSF018F05- GCCCCTCCCCCTACCTCGTCCGCCGTTTTTGACAAAATCCTGAGGCTCAAACGTCACGGC
                      ____________________________________________________________
consensus GCCCCTCCCCCTACCTCGTCCGCCGTTTTTGACAAAATCCTGAGGCTCAAACGTCACGGC
 
. : . : . : . : . : . :
JMSF018F05- TGGCCGCTCTAGAGTTGGAGGCGCGGCAACGACTGTGGAAGTAGAGGCTGAGAAGACCCT
JMSF010M17+ CTGAGAAGACCCT
                      ____________________________________________________________
consensus TGGCCGCTCTAGAGTTGGAGGCGCGGCAACGACTGTGGAAGTAGAGGCTGAGAAGACCCT
 
. : . : . : . : . : . :
JMSF018F05- GAACGCAACGGCTGAAGAGGAGGCAGTGAAGCGGTGCGGTTGGAAGACGGTTGGGGAAAT
JMSF010M17+ GAACGCAACGGCTGAAGAGGAGGCAGTGAAGCGGTGCGGTTGGAAGACGGTTGGGGAAAT
                      ____________________________________________________________
consensus GAACGCAACGGCTGAAGAGGAGGCAGTGAAGCGGTGCGGTTGGAAGACGGTTGGGGAAAT
 
. : . : . : . : . : . :
JMFF020A15+ CGACGGAAGGAAGGATTCCATCAAAAGAAAACAGGC
JMSF018F05- GAGCGTAGGTTTCACTGCGAGTTTCGACGGAAGGAAGGATTCCATCAAAAGAAAACAGGC
JMSF010M17+ GAGCGTAGGTTTCACTGCGAGTTTCGACGGAAGGAAGGATTCCATCAAAAGAAAACAGGC
                      ____________________________________________________________
consensus GAGCGTAGGTTTCACTGCGAGTTTCGACGGAAGGAAGGATTCCATCAAAAGAAAACAGGC
 
. : . : . : . : . : . :
JMFF020A15+ GGACTTGAGAAGAAAAGCCCCCAGATTTTGAAATGCAATGTGTAATTCCTTCTGGAGCCG
JMSF018F05- GGACTTGAGAAGAAAAGCCCCCAGATTTTGAAATGCAATGTGTAATTCCTTCTGGAGCCG
JMSF010M17+ GGACTTGAGAAGAAAAGCCCCCAGATTTTGAAATGCAATGTGTAATTCCTTCTGGAGCCG
                      ____________________________________________________________
consensus GGACTTGAGAAGAAAAGCCCCCAGATTTTGAAATGCAATGTGTAATTCCTTCTGGAGCCG
 
. : . : . : . : . : . :
JMFF020A15+ CTGCGGTGGCCGGACACGGCGGCGGACTTCGAGCTTTAAGCGAGCGCTTCCAGTATCCCC
JMSF018F05- CTGCGGTGGCCGGACACGGCGGCGGACTTCGAGCTTTAAGCGAGCGCTTCCAGTATCCCC
JMSF010M17+ CTGCGGTGGCCGGACACGGCGGCGGACTTCGAGCTTTAAGCGAGCGCTTCCAGTATCCCC
                      ____________________________________________________________
consensus CTGCGGTGGCCGGACACGGCGGCGGACTTCGAGCTTTAAGCGAGCGCTTCCAGTATCCCC
 
. : . : . : . : . : . :
JMFF020A15+ ACCGTAATGCACCGGATCAACTTCTTTGCTGCTA
JMSF018F05- ACCGTAATGCACCGGATCAACTTCTTTGCTGCTA
JMSF010M17+ ACCGTAATGCACCGGATCAACTTCTTTGCTGCTATGCTAGTGACGGAGTGAAATGAGCTC
                      ____________________________________________________________
consensus ACCGTAATGCACCGGATCAACTTCTTTGCTGCTATGCTAGTGACGGAGTGAAATGAGCTC