Contig 013248:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008E22Sequence363013248 (2)ref|XP_006358033.1|1e-18PREDICTED: uncharacterized protein LOC102602534 isoform X1 [Solanum tuberosum]722005608 (2)ref|XP_009804359.1|1e-47PREDICTED: N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1
JMSF038M04Sequence683013248 (2)ref|XP_009623022.1|1e-42PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1 is857005608 (2)ref|XP_009804359.1|2e-66PREDICTED: N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1

Alignment

This contig is upended


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JMSF038M04+                                                     TGAATAGTAATGACTTCC
                      ____________________________________________________________
consensus                                                       TGAATAGTAATGACTTCC
 
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JMSF038M04+           AAATAGAGGGGTCTCATAAACTATGACATGGACATCTAACTGAGTTATAACCAACCCCTT
                      ____________________________________________________________
consensus             AAATAGAGGGGTCTCATAAACTATGACATGGACATCTAACTGAGTTATAACCAACCCCTT
 
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JMSF038M04+           CCATTTTAAGCATAGCAAGTTAGGAATTAGTGCTATGTTTCTACCACATATTACCGAACG
                      ____________________________________________________________
consensus             CCATTTTAAGCATAGCAAGTTAGGAATTAGTGCTATGTTTCTACCACATATTACCGAACG
 
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JMSF038M04+           ATCATAGGCAAGCTGGATCCAGTTGATTTCTGCAGGTGAACTATTTTGCAATGCTAAAAC
                      ____________________________________________________________
consensus             ATCATAGGCAAGCTGGATCCAGTTGATTTCTGCAGGTGAACTATTTTGCAATGCTAAAAC
 
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JMSF038M04+           ATCAAACTTGTGACACCCATAGCTTAACTTGCCATTCATCCTTCCACTAGTATTTTGGCC
                      ____________________________________________________________
consensus             ATCAAACTTGTGACACCCATAGCTTAACTTGCCATTCATCCTTCCACTAGTATTTTGGCC
 
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JMSF038M04+           ATCAGAGTCACCAGAAAAATAAATCCTCTGACCACTGGAATTCACAACTGCTTTTATTTC
                      ____________________________________________________________
consensus             ATCAGAGTCACCAGAAAAATAAATCCTCTGACCACTGGAATTCACAACTGCTTTTATTTC
 
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JMSF038M04+           AGCTCCAACCTTTATCAATTGGCGATCACCACCATCGGCCACATAACAACCAAGTAAAGA
JMSF008E22+                                                                    AGA
                      ____________________________________________________________
consensus             AGCTCCAACCTTTATCAATTGGCGATCACCACCATCGGCCACATAACAACCAAGTAAAGA
 
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JMSF038M04+           TAACTTGCAATCATCTTGCGGAAACATAGGTAGATTTTTATTTATCTCATGAAGAATACC
JMSF008E22+           TAACTTGCAATCATCTTGCGGAAACATAGGTAGATTTTTATTTATCTCATGAAGAATACC
                      ____________________________________________________________
consensus             TAACTTGCAATCATCTTGCGGAAACATAGGTAGATTTTTATTTATCTCATGAAGAATACC
 
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JMSF038M04+           CTGAAGATCCAAGCAACTCGCTGAAGAATTTAGAGTAGGCTCACTGCAAGAGAACGCGAT
JMSF008E22+           CTGAAGATCCAAGCAACTCGCTGAAGAATTTAGAGTAGGCTCACTGCAAGAGAACGCGAT
                      ____________________________________________________________
consensus             CTGAAGATCCAAGCAACTCGCTGAAGAATTTAGAGTAGGCTCACTGCAAGAGAACGCGAT
 
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JMSF038M04+           AACAATGTCAAGAAAAGCTTCAGAGGATGAGATGAACCAGCCGAACAGGAAATGACAAGG
JMSF008E22+           AACAATGTCAAGAAAAGCTTCAGAGGATGAGATGAACCAGCCGAACAGGAAATGACAAGG
                      ____________________________________________________________
consensus             AACAATGTCAAGAAAAGCTTCAGAGGATGAGATGAACCAGCCGAACAGGAAATGACAAGG
 
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JMSF038M04+           ATGTGAACTCAATTGAGGGGTTGAACTAAGATGGTCCGGCCACCAAATCCTGCATTTTTT
JMSF008E22+           ATGTGAACTCAATTGAGGGGTTGAACTAAGATGGTCCGGCCACCAAATCCTGCATTTTTT
                      ____________________________________________________________
consensus             ATGTGAACTCAATTGAGGGGTTGAACTAAGATGGTCCGGCCACCAAATCCTGCATTTTTT
 
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JMSF038M04+           AGCAGCTCCCATTGCCAAACCCTCTTCAAATCATTGAATTGAGCGTGAGATAGAGAGTAG
JMSF008E22+           AGCAGCTCCCATTGCCAAACCCTCTTCAAATCATTGAATTGAGCGTGAGATAGAGAGTAG
                      ____________________________________________________________
consensus             AGCAGCTCCCATTGCCAAACCCTCTTCAAATCATTGAATTGAGCGTGAGATAGAGAGTAG
 
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JMSF038M04+           TAAC                                                        
JMSF008E22+           TAACATCGTAATACCGATTACTACTACCAGCTAATGTTGATTGCTACTTGTGCTCCCAGT
                      ____________________________________________________________
consensus             TAACATCGTAATACCGATTACTACTACCAGCTAATGTTGATTGCTACTTGTGCTCCCAGT