Contig 013243:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF021I24+                                                                  CTATC
                      ____________________________________________________________
consensus                                                                    CTATC
 
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JMSF021I24+           ACAACCACTTGGTTAAGCTGGCTCAGTAATAATATTGAATTCAAAAATGATATAACATGA
                      ____________________________________________________________
consensus             ACAACCACTTGGTTAAGCTGGCTCAGTAATAATATTGAATTCAAAAATGATATAACATGA
 
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JMSF021I24+           GATAGGAATTTAGAGAATGTGAAGGAATCATTATTCTTCATTGAGCTCCAGAAGAAAGGA
                      ____________________________________________________________
consensus             GATAGGAATTTAGAGAATGTGAAGGAATCATTATTCTTCATTGAGCTCCAGAAGAAAGGA
 
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JMSF021I24+           TTGGTGTCAATCAGCACCATCAATAAGCTTACATCATCTGTGTAAAGCTTTGATGATGCT
                      ____________________________________________________________
consensus             TTGGTGTCAATCAGCACCATCAATAAGCTTACATCATCTGTGTAAAGCTTTGATGATGCT
 
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JMSF021I24+           GGAGCCATAGCCACTGGTTGATCAGGTAGAGATTATGTCAAATGGGAAATAGACAAGCTC
                      ____________________________________________________________
consensus             GGAGCCATAGCCACTGGTTGATCAGGTAGAGATTATGTCAAATGGGAAATAGACAAGCTC
 
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JMSF021I24+           CAAAGCAGTGATGCTGAAAGTAGAGACTGGAGACCAGAGGGTCCAATGGAGATGATGAAT
                      ____________________________________________________________
consensus             CAAAGCAGTGATGCTGAAAGTAGAGACTGGAGACCAGAGGGTCCAATGGAGATGATGAAT
 
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JMSF021I24+           GATTTGTTTGTTTGTTTTTCCTGGATTCTCTTCTATCTTTTATCACATCGTCGGGCTGCC
JMSF007M01+                               CTGGATTCTCTTCTATCTTTTATCTCATCGTCGGGCTGCC
                      ____________________________________________________________
consensus             GATTTGTTTGTTTGTTTTTCCTGGATTCTCTTCTATCTTTTATCTCATCGTCGGGCTGCC
 
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JMSF021I24+           TAGCATCGAAGCCCGAAAGGTGCACTGGAGCTGCCGAGCAGTGCTCGTCTAAGGCAGCAG
JMSF007M01+           TAGCATCGAAGCCCGAAGGGTGCACTGGAGCTGCCGAGCAGTGCTCGTCTAAGGCAGCAG
                      ____________________________________________________________
consensus             TAGCATCGAAGCCCGAAGGGTGCACTGGAGCTGCCGAGCAGTGCTCGTCTAAGGCAGCAG
 
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JMSF021I24+           CCAAGGCGCCGAGCAGACGGAGCAGTGTTCGTCGAAGGACCTTGAAGAGTAGTCGCCGTT
JMSF007M01+           CCAAGGCGCCGAGCAGACGGAGCAGTGTTCGTCGAAGGACCTTGAAGAGTAGTCGCCGTT
                      ____________________________________________________________
consensus             CCAAGGCGCCGAGCAGACGGAGCAGTGTTCGTCGAAGGACCTTGAAGAGTAGTCGCCGTT
 
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JMSF021I24+           TCAACCGTCGCGTGTCGCAGAGAGCCACAGACCGGAGAGTGGAGAATCGGAGACGGCGAG
JMSF007M01+           TCAACCGTCGCGTGTCGCAGAGAGCCACAGACCGGAGAGTGGAGAATCGGAGACGGCGAG
                      ____________________________________________________________
consensus             TCAACCGTCGCGTGTCGCAGAGAGCCACAGACCGGAGAGTGGAGAATCGGAGACGGCGAG
 
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JMSF021I24+           ACGCAACAGATGATCAGAGCGGCAGGCTTCGGCCTTCGGTCTTCGCAGAGAGGCTGAGGG
JMSF007M01+           ACGCAACAGATGATCAGAGCGGCAGGCTTCGGCCTTCGGTCTTCGCAGAGAGGCTGAGGG
                      ____________________________________________________________
consensus             ACGCAACAGATGATCAGAGCGGCAGGCTTCGGCCTTCGGTCTTCGCAGAGAGGCTGAGGG
 
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JMSF021I24+           AGAGTAGTCGCCGAGAGTGAGACAGTGCAGTGCTCCGGTTAGGGATTGAGGAC       
JMSF007M01+           AGAGTAGTCGCCGAGAGTGAGACAGTGCAGTGCTCCGGTTAGGGATTGAGGACGGAGCTG
                      ____________________________________________________________
consensus             AGAGTAGTCGCCGAGAGTGAGACAGTGCAGTGCTCCGGTTAGGGATTGAGGACGGAGCTG