Contig 013233:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF037C24+                                            GCGGCAGCCGAGAGCTGCATACTAGGG
                      ____________________________________________________________
consensus                                              GCGGCAGCCGAGAGCTGCATACTAGGG
 
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JMSF037C24+           TTATTGATATTGATATTCGCCCCCTGGAAATTCAGCAGCGTGGTGGCGGAGCTGTCCGCC
                      ____________________________________________________________
consensus             TTATTGATATTGATATTCGCCCCCTGGAAATTCAGCAGCGTGGTGGCGGAGCTGTCCGCC
 
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JMSF037C24+           GGCGACAACCCGATTCCGGCCGGGAAGAGGCTCCGCCGCTGCGAGAGCGAGAAGTTAGGG
                      ____________________________________________________________
consensus             GGCGACAACCCGATTCCGGCCGGGAAGAGGCTCCGCCGCTGCGAGAGCGAGAAGTTAGGG
 
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JMSF037C24+           TTGAAATACTGAGATCGTAGCTGAGACGGCACGGACATGCTCGACCCGGAGCTCCGCAAG
                      ____________________________________________________________
consensus             TTGAAATACTGAGATCGTAGCTGAGACGGCACGGACATGCTCGACCCGGAGCTCCGCAAG
 
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JMSF037C24+           GAAATATTAAGCGACGTGAAATTGGCGGGAATCGTGCCGGTCCCGGTGGCGGCTATCACA
                      ____________________________________________________________
consensus             GAAATATTAAGCGACGTGAAATTGGCGGGAATCGTGCCGGTCCCGGTGGCGGCTATCACA
 
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JMSF037C24+           GCCGGCTCGGCCTGCTGGAGCAGCCACTCGATGGTCTCCCCGTCGGACTTGTGGCCGAGC
JMSF048B18+           GCCGGCTCGGCCTGCTGGAGCAGCCACTCGATGGTCTCCCCGTCGGACTTGTGGCCGAGC
                      ____________________________________________________________
consensus             GCCGGCTCGGCCTGCTGGAGCAGCCACTCGATGGTCTCCCCGTCGGACTTGTGGCCGAGC
 
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JMSF037C24+           TCGCGGGTGAGCTGGAAAACCCTGGCGGCGCAGAGCGCCGGCATGCGGATGCGCCGCCCC
JMSF048B18+           TCGCGGGTGAGCTGGAAAACCCTGGCGGCGCAGAGCGCCGGCATGCGGATGCGCCGCCCC
                      ____________________________________________________________
consensus             TCGCGGGTGAGCTGGAAAACCCTGGCGGCGCAGAGCGCCGGCATGCGGATGCGCCGCCCC
 
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JMSF037C24+           CGCCCGTCCACCTTCGTGTGCCGGTCCTTCGTCGACGTCCGCTTCGGCGGCGGCTTCTTC
JMSF048B18+           CGCCCGTCCACCTTCGTGTGCCGGTCCTTCGTCGACGTCCGCTTCGGCGGCGGCTTCTTC
                      ____________________________________________________________
consensus             CGCCCGTCCACCTTCGTGTGCCGGTCCTTCGTCGACGTCCGCTTCGGCGGCGGCTTCTTC
 
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JMSF037C24+           GACGGCTCCGCCAAAGCAGCGGAGTCGGAGACGGCGGCGGAGGCGGAGGTGGATCGAGCT
JMSF048B18+           GACGGCTCCGCCAAAGCAGCGGAGTCGGAGACGGCGGCGGAGGCGGAGGTGGATCGAGCT
                      ____________________________________________________________
consensus             GACGGCTCCGCCAAAGCAGCGGAGTCGGAGACGGCGGCGGAGGCGGAGGTGGATCGAGCT
 
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JMSF037C24+           GCAGCGGCGTTAGGGTTTGCGCTGGTATCCAGGGAGGAAGAGATTGCGAGAGAAGGATAA
JMSF048B18+           GCAGCGGCGTTAGGGTTTGCGCTGGTATCCAGGGAGGAAGAGATTGCGAGAGAAGGATAA
JMSF006E03+                                              GGAAGAGATTGCGAGAGAAGGATAA
                      ____________________________________________________________
consensus             GCAGCGGCGTTAGGGTTTGCGCTGGTATCCAGGGAGGAAGAGATTGCGAGAGAAGGATAA
 
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JMSF037C24+           GGGACGATGGCGGTGGCGGAGGAAGAGCTGCTGGAGCATGCTTCGTCTTCTTTCTTCTCA
JMSF048B18+           GGGACGATGGCGGTGGCGGAGGAAGAGCTGCTGGAGCATGCTCCGTCTTCTTTCTTCTCA
JMSF006E03+           GGGACGATGGCGGTGGCGGAGGAAGAGCTGCTGGAGCATGCTTCGTCTTCTTTCTTCTCA
                      ____________________________________________________________
consensus             GGGACGATGGCGGTGGCGGAGGAAGAGCTGCTGGAGCATGCTTCGTCTTCTTTCTTCTCA
 
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JMSF037C24+           AGCAATTGGAACGGAAAAGTTGGCCGGCGATTATGGTGGTGGTGGTGGAGATGATCATCA
JMSF048B18+           AGCAATTGGAACGGAAAAGTTGGCCGGCGATTATGGTGGTGGTGGTGGAGATGATCATCA
JMSF006E03+           AGCAATTGGAACGGAAAAGTTGGCCGGCGATTATGGTGGTGGTGGTGGAGATGATCATCA
                      ____________________________________________________________
consensus             AGCAATTGGAACGGAAAAGTTGGCCGGCGATTATGGTGGTGGTGGTGGAGATGATCATCA
 
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JMSF037C24+           CCTCCTCGTTCCATGATC                                          
JMSF048B18+           CCTCCTCGTTCCATGATCACATGCGTGACTGAATAATAGATATATAAATCTATCTAAACA
JMSF006E03+           CCTCCTCGTTCCATGATCACATGCGTGACTGAATAATAGATATATAAATCTATCTAAACA
                      ____________________________________________________________
consensus             CCTCCTCGTTCCATGATCACATGCGTGACTGAATAATAGATATATAAATCTATCTAAACA
 
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JMSF048B18+           TACACTACTGAAAAACCTTTCTATTTCTCTTTCTCTTTTCTCTCTCAATATTTTTTTTAT
JMSF006E03+           TACACTACTGAAAAACCTTTCTATTTCTCTTTCTCTTTTCTCTCTCAATATTTTTTTTAT
                      ____________________________________________________________
consensus             TACACTACTGAAAAACCTTTCTATTTCTCTTTCTCTTTTCTCTCTCAATATTTTTTTTAT
 
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JMSF048B18+           ATTTTTTATTTTAAAGATAGAAACAGCGACAAAACCTTATTAAATTCTTGTGGGCTCTCT
JMSF006E03+           ATTTTTTATTTTAAAGATAGAAACAGCGACAAAACCTTATTAAATTCTTGTGGGCTCTCT
                      ____________________________________________________________
consensus             ATTTTTTATTTTAAAGATAGAAACAGCGACAAAACCTTATTAAATTCTTGTGGGCTCTCT
 
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JMSF048B18+           CACTCTCTCTCCCTCTCTGGAGAATGAAATTATTTCCTTAGTTGCGTTTAGCTTCTC   
JMSF006E03+           CACTCTCTCTCCCTCTCTGGAGAATGAAATTATTTCCTTAGTTGCGTTTAGCTTCTCTCC
                      ____________________________________________________________
consensus             CACTCTCTCTCCCTCTCTGGAGAATGAAATTATTTCCTTAGTTGCGTTTAGCTTCTCTCC