Contig 013227:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF011J04+                                                         TGGCATCTTGATTT
                      ____________________________________________________________
consensus                                                           TGGCATCTTGATTT
 
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JMFF011J04+           ATGCCCTTGCGACCCTGTTGAGTGAATATACAAGAGGAGCGGCTCCTTCCATTTGTGAAT
                      ____________________________________________________________
consensus             ATGCCCTTGCGACCCTGTTGAGTGAATATACAAGAGGAGCGGCTCCTTCCATTTGTGAAT
 
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JMFF011J04+           ATCCGATTAGGTATCGAAGACAAATGCTGCAATGCCCTCGTATGGCTGTAAAACGCTCTC
                      ____________________________________________________________
consensus             ATCCGATTAGGTATCGAAGACAAATGCTGCAATGCCCTCGTATGGCTGTAAAACGCTCTC
 
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JMFF011J04+           TTTCGCCCAAACATGCCTATTCCAAAACATCCAGGAGAAACCTTCTCCCCATTACTTCTT
JMFS062C01+                                  AAAACATCCAGGAGAAACCTTCTCCCCATTACTTCTT
                      ____________________________________________________________
consensus             TTTCGCCCAAACATGCCTATTCCAAAACATCCAGGAGAAACCTTCTCCCCATTACTTCTT
 
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JMFF011J04+           GTACTCTCGCTACTGGTTGAGACACAACAACCCATTTTGCTCAGAAACAGAAAGCGACCA
JMFS062C01+           GTACTCTCGCTACTGGTTGAGACACAACAACCCATTTTGCTCAGAAACAGAAAGCGACCA
                      ____________________________________________________________
consensus             GTACTCTCGCTACTGGTTGAGACACAACAACCCATTTTGCTCAGAAACAGAAAGCGACCA
 
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JMFF011J04+           TCTAATTGAAATTAACGAAAATGCTCTTCTTCCAAGAAGAAACTGATCTCAGGTTGAACT
JMFS062C01+           TCTAATTGAAATTAACGAAAATGCTCTTCTTCCAAGAAGAAACTGATCTCAGGTTGAACT
                      ____________________________________________________________
consensus             TCTAATTGAAATTAACGAAAATGCTCTTCTTCCAAGAAGAAACTGATCTCAGGTTGAACT
 
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JMFF011J04+           TTATACCCAGCCACCAAAAGACTGTTCAAGTCACAAGATTCCAACCAAAACCCACAGCTT
JMFS062C01+           TTATACCCAGCCACCAAAAGACTGTTCAAGTCACAAGATTCCAACCAAAACCCACAGCTT
                      ____________________________________________________________
consensus             TTATACCCAGCCACCAAAAGACTGTTCAAGTCACAAGATTCCAACCAAAACCCACAGCTT
 
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JMFF011J04+           TCTTTTGAAAATACAATGGAAAACTAGGTTCTGCTTTATCTCGGTCAAATTTCAAATCCA
JMFS062C01+           TCTTTTGAAAATACAATGGAAAACTAGGTTCTGCTTTATCTCGGTCAAATTTCAAATCCA
JMSF015I24+                                                                 AATCCA
JMSF005E01+                 GAAAATACAATGGAAAACTAGGTTCTGCTTTATCTCGGTCAAATTTCAAATCCA
                      ____________________________________________________________
consensus             TCTTTTGAAAATACAATGGAAAACTAGGTTCTGCTTTATCTCGGTCAAATTTCAAATCCA
 
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JMFF011J04+           CCACAGATGATGTGAGCGTATAATGAAGCCAG                            
JMFS062C01+           CCACAGATGATGTGAGCGTATAATGAAGCCAGCTGAGCTTGTGAAATGAGGAAACCCAAG
JMSF015I24+           CCACAGATGATGTGAGCGTATAATGAAGCCAGCTGAGCTTGTGAAATGAGGAAACCCAAG
JMSF005E01+           CCACAGATGATGTGAGCGTATAATGAAGCCAGCTGAGCTTGTGAAATGAGGAAACCCAAG
                      ____________________________________________________________
consensus             CCACAGATGATGTGAGCGTATAATGAAGCCAGCTGAGCTTGTGAAATGAGGAAACCCAAG
 
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JMFS062C01+           ATTGAGATCAGGAATCTAACTTCAACCAGAAAATGTTCTTTTCTTGCTCTCTTCCAAAGC
JMSF015I24+           ATTGAGATCAGGAATCTAACTTCAACCAGAAAATGTTCTTTTCTTGCTCTCTTCCAAAGC
JMSF005E01+           ATTGAGATCAGGAATCTAACTTCAACCAGAAAATGTTCTTTTCTTGCTCTCTTCCAAAGC
                      ____________________________________________________________
consensus             ATTGAGATCAGGAATCTAACTTCAACCAGAAAATGTTCTTTTCTTGCTCTCTTCCAAAGC
 
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JMFS062C01+           TCTCTAACAACGAAGGCTACCAAAGCAAGCCCTTTACAGGGAGAAGAAACCGCCAAAAGA
JMSF015I24+           TCTCTAACAACGAAGGCTACCAAAGCAAGCCCTTTACAGGGAGAAGAAACCGCCAAAAGA
JMSF005E01+           TCTCTAACAACGAAGGCTACCAAAGCAAGCCCTTTACAGGGAGAAGAAACCGCCAAAAGA
                      ____________________________________________________________
consensus             TCTCTAACAACGAAGGCTACCAAAGCAAGCCCTTTACAGGGAGAAGAAACCGCCAAAAGA
 
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JMFS062C01+           GAGTGCGTAGGGCGGTTCTGGCCCACGCCGGTGGGCCGGTGAGCTGGAGGTGGTGTACAA
JMSF015I24+           GAGTGCGTAGGGCGGTTCTGGCCCACGCCGGTGGGCCGGTGAGCTGGAGGTGGTGTACAA
JMSF005E01+           GAGTGCGTAGGGCGGTTCTGGCCCACGCCGGTGGGCCGGTGAGCTGGAGGTGGTGTACAA
                      ____________________________________________________________
consensus             GAGTGCGTAGGGCGGTTCTGGCCCACGCCGGTGGGCCGGTGAGCTGGAGGTGGTGTACAA
 
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JMFS062C01+           ACGCGGAGAAGATACTGCAGATGGATGGCACTGTCACTGGCGCCGCCGCCGTGGTGCAGG
JMSF015I24+           ACGCGGAGAAGATACTGCAGATGGATGGCACTGTCACTGGCGCCGCCGCCGTGGTGCAGG
JMSF005E01+           ACGCGGAGAAGATACTGCAGATGGATGGCACTGTCACTGGCGCCGCCGCCGTGGTGCAGG
                      ____________________________________________________________
consensus             ACGCGGAGAAGATACTGCAGATGGATGGCACTGTCACTGGCGCCGCCGCCGTGGTGCAGG
 
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JMFS062C01+           GGAGAGATATCAGATATGGAGTCAGTCTAC                              
JMSF015I24+           GGAGAGATATCAGATATGGAGTCAGTCTACTACGCTTTTT                    
JMSF005E01+           GGAGAGATATCAGATATGGAGTCAGTCTACTACGCTTTTTGTTTTTTCCTTTTTTTCTTC
                      ____________________________________________________________
consensus             GGAGAGATATCAGATATGGAGTCAGTCTACTACGCTTTTTGTTTTTTCCTTTTTTTCTTC