clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009H12 | Sequence | 551 | 013220 (4) | ref|XP_006344289.1| | 6e-45 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum tuberosum] | 708 | 009661 (3) | ref|XP_004236995.1| | 1e-53 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
JMFF014J18 | Sequence | 554 | 013220 (4) | ref|XP_006344289.1| | 2e-45 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum tuberosum] | 818 | 009661 (3) | ref|XP_004236995.1| | 4e-78 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
JMFF032I17 | Sequence | 573 | 013220 (4) | ref|XP_004236995.1| | 7e-49 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] | 803 | 009661 (3) | ref|XP_004236995.1| | 2e-74 | PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum] |
JMSF004C02 | Sequence | 329 | 013220 (4) | ref|XP_009803169.1| | 2e-17 | PREDICTED: dnaJ homolog subfamily B member 1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF014J18+ AGCCTTTATAAAGCTCCTCCAAGCTACACGGCAGCAAGTTCTCCACAGG
JMFF009H12+ CTTTATAAAGCTCCTCCAAGCTACACGGCAGCAAGTTCTCCACAGG
____________________________________________________________
consensus AGCCTTTATAAAGCTCCTCCAAGCTACACGGCAGCAAGTTCTCCACAGG
. : . : . : . : . : . :
JMFF014J18+ CGCCGCCTTCCGCGGCGTTCCTCTGTTACCACCGTCATGAGCGGGGCTACCTTTATAAAT
JMFF009H12+ CGCCGCCTTCCGCGGCGTTCCTCTGTTACCACCGTCATGAGCGGGGCTACCTTTATAAAT
____________________________________________________________
consensus CGCCGCCTTCCGCGGCGTTCCTCTGTTACCACCGTCATGAGCGGGGCTACCTTTATAAAT
. : . : . : . : . : . :
JMFF014J18+ TCCGTCCGGCCGACCGAAAAACTCGGCGAATATCTTCCGCATCACGCGGATCGTACTTAA
JMFF009H12+ TCCGTCCGGCCGACCGAAAAACTCGGCGAATATCTTCCGCATCACGCGGATCGTACTTAA
____________________________________________________________
consensus TCCGTCCGGCCGACCGAAAAACTCGGCGAATATCTTCCGCATCACGCGGATCGTACTTAA
. : . : . : . : . : . :
JMFF014J18+ ATCCCCTTCCACCGCCGCCGCTCACACCCGTCGGGGACGCCGGATCGAATTGGCCGGATT
JMFF009H12+ ATCCCCTTCCACCGCCGCCGCTCACACCCGTCGGGGACGCCGGATCGAATTGGCCGGATT
JMFF032I17+ GGATCGAATTGGCCGGATT
____________________________________________________________
consensus ATCCCCTTCCACCGCCGCCGCTCACACCCGTCGGGGACGCCGGATCGAATTGGCCGGATT
. : . : . : . : . : . :
JMFF014J18+ TCAAAACCTCCTCGCCGTACAAATCATAGATCTGCCGCTTGTGAGAGTTGCTGAGCACAT
JMFF009H12+ TCAAAACCTCCTCGCCGTACAAATCATAGATCTGCCGCTTGTGAGAGTTGCTGAGCACAT
JMFF032I17+ TCAAAACCTCCTCGCCGTACAAATCATAGATCTGCCGCTTGTGAGAGTTGCTGAGCACAT
____________________________________________________________
consensus TCAAAACCTCCTCGCCGTACAAATCATAGATCTGCCGCTTGTGAGAGTTGCTGAGCACAT
. : . : . : . : . : . :
JMFF014J18+ CGTACGCCTCCGATATCTGTTTGAACTTCGCCTCCGCTTCCTTCTTGTTCTGGCTGTTCT
JMFF009H12+ CGTACGCCTCCGATATCTGTTTGAACTTCGCCTCCGCTTCCTTCTTGTTCTGGCTGTTCT
JMFF032I17+ CGTACGCCTCCGATATCTGTTTGAACTTCGCCTCCGCTTCCTTCTTGTTCTGGCTGTTCT
JMSF004C02+ CTCCGCTTCCTTCTTGTTCTGGCTGTTCT
____________________________________________________________
consensus CGTACGCCTCCGATATCTGTTTGAACTTCGCCTCCGCTTCCTTCTTGTTCTGGCTGTTCT
. : . : . : . : . : . :
JMFF014J18+ TATCCGGATGCCACTTCATCGCCAGCCGCCGGTACGCCTTCTTCAAATCTTCTTCGTTCG
JMFF009H12+ TATCCGGATGCCACTTCATCGCCAGCCGCCGGTACGCCTTCTTCAAATCTTCTTCGTTCG
JMFF032I17+ TATCCGGATGCCACTTCATCGCCAGCCGCCGGTACGCCTTCTTCAAATCTTCTTCGTTCG
JMSF004C02+ TATCCGGATGCCACTTCATCGCCAGCCGCCGGTACGCCTTCTTCAAATCTTCTTCGTTCG
____________________________________________________________
consensus TATCCGGATGCCACTTCATCGCCAGCCGCCGGTACGCCTTCTTCAAATCTTCTTCGTTCG
. : . : . : . : . : . :
JMFF014J18+ CATTCTTCGAAACTCTGAGTATATTGTAGTAATCCACCCCCATCTCCTCACCGTCACAAT
JMFF009H12+ CATTCTTCGAAACTCTGAGTATATTGTAGTAATCCACCCCCATCTCCTCACCGTCACAAT
JMFF032I17+ CATTCTTCGAAACTCTGAGTATATTGTAGTAATCCACCCCCATCTCCTCACCGTCACAAT
JMSF004C02+ CATTCTTCGAAACTCTGAGTATATTGTAGTAATCCACCCCCATCTCCTCACCGTCACAAT
____________________________________________________________
consensus CATTCTTCGAAACTCTGAGTATATTGTAGTAATCCACCCCCATCTCCTCACCGTCACAAT
. : . : . : . : . : . :
JMFF014J18+ CGAGAAGCTCGCGAGTACGGGAATTCGTGCGCGTATATATACACACAACTCTCAAACGAA
JMFF009H12+ CGAGAAGCTCGCGAGTACGGGAATTCGTGCGCGTATATATACACACAACTCTCAAACGAA
JMFF032I17+ CGAGAAGCTCGCGAGTACGGGAATTCGTGCGCGTATATATACATACAACTCTCAAACGAA
JMSF004C02+ CGAGAAGCTCGCGAGTACGGGAATTCGTGCGCGTATATATACACACAACTCTCAAACGAA
____________________________________________________________
consensus CGAGAAGCTCGCGAGTACGGGAATTCGTGCGCGTATATATACACACAACTCTCAAACGAA
. : . : . : . : . : . :
JMFF014J18+ AATGTAGAACTCAAGGGAATCCAAC
JMFF009H12+ AATGTAGAACTCAAGGGAATTCAAC
JMFF032I17+ AATGTAGAACTCAAGGGAATCCAACGGGGAATCTCCGGCGAGACGAGACGGCCGGAATTA
JMSF004C02+ AATGTAGAACTCAAGGGAATCCAACGGGGAATCTCCGGCGAGACGAGACGGCCGGAATTA
____________________________________________________________
consensus AATGTAGAACTCAAGGGAATCCAACGGGGAATCTCCGGCGAGACGAGACGGCCGGAATTA
. : . : . : . : . : . :
JMFF032I17+ AAAGGATTGAGGAAACGAAAGCGCAGGGTAGAGGAAAGGCAGAGTTTGAGCTAAGATAC
JMSF004C02+ AAAGGATTGAGGAAACGAAAGCGCAGGGTAGAGGAAAGGCAGAGTTTGAGCTAAGATACC
____________________________________________________________
consensus AAAGGATTGAGGAAACGAAAGCGCAGGGTAGAGGAAAGGCAGAGTTTGAGCTAAGATACC