Contig 013207:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS032D01Sequence480013207 (2)ref|XP_004248383.1|9e-57PREDICTED: calcium-binding protein PBP1-like [Solanum lycopersicum]
JMSF002J06Sequence351013207 (2)ref|XP_011095280.1|1e-23PREDICTED: calcium-binding protein PBP1 [Sesamum indicum]737002751 (7)ref|XP_011093637.1|2e-69PREDICTED: probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial [S

Alignment

This contig is upended


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JMFS032D01+                       TTAATGTCTGTATATTTCAGAATCAAACATTATTGGTAAATTACAGAA
                      ____________________________________________________________
consensus                         TTAATGTCTGTATATTTCAGAATCAAACATTATTGGTAAATTACAGAA
 
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JMFS032D01+           AAGAATGAAACTTGTATAGGTTAATTGTCATGGGAATTCAGTAAAACGGTAAGAAGTTAA
                      ____________________________________________________________
consensus             AAGAATGAAACTTGTATAGGTTAATTGTCATGGGAATTCAGTAAAACGGTAAGAAGTTAA
 
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JMFS032D01+           AAAGAAAAGTTACAATCTCTGAAGAGATCATGAAGGGCCTGGTCTAACAAAAACTCGGAC
                      ____________________________________________________________
consensus             AAAGAAAAGTTACAATCTCTGAAGAGATCATGAAGGGCCTGGTCTAACAAAAACTCGGAC
 
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JMFS032D01+           TGCTCCATCAAATCAGGGCTCAATCTAAACATTAGCACACAAAACTCCATCTGATTCAGG
                      ____________________________________________________________
consensus             TGCTCCATCAAATCAGGGCTCAATCTAAACATTAGCACACAAAACTCCATCTGATTCAGG
 
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JMFS032D01+           GCACCATCTCCATCGGAATCTCCTTCTCGGAGCATGCTCCGGAGATCATCGTCGGTGAAG
                      ____________________________________________________________
consensus             GCACCATCTCCATCGGAATCTCCTTCTCGGAGCATGCTCCGGAGATCATCGTCGGTGAAG
 
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JMFS032D01+           TCTTGCAAGCCCAGCAAAGCAGAGTTATTCTTGAGGCTCTCGAAGGTGATGACCCCTCGG
JMSF002J06+                    CCCAGCAAAGCAGAGTTATTCTTGAGGCTCTCGAAGGTGATGACCCCTCGG
                      ____________________________________________________________
consensus             TCTTGCAAGCCCAGCAAAGCAGAGTTATTCTTGAGGCTCTCGAAGGTGATGACCCCTCGG
 
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JMFS032D01+           TCTTTATCCATGAGTAGCTGAAACCCATTGCAGAGCTCGCCTATTAAGGCGTCCCCGCCA
JMSF002J06+           TCTTTATCCATGAGTAGCTGAAACCCATTGCAGAGCTCGCCTATTAAGGCGTCCCCGCCA
                      ____________________________________________________________
consensus             TCTTTATCCATGAGTAGCTGAAACCCATTGCAGAGCTCGCCTATTAAGGCGTCCCCGCCA
 
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JMFS032D01+           AGCTTTTCGGCCATGAGAGGCAATAAATCTTGGAAATTTGACTGGGCTCTTGATTCCAGT
JMSF002J06+           AGCTTTTCGGCCATGAGAGGCAATAAATCTTGGAAATTTGACTGGGCTCTTGATTCCATT
                      ____________________________________________________________
consensus             AGCTTTTCGGCCATGAGAGGCAATAAATCTTGGAAATTTGACTGGGCTCTTGATTCCATT
 
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JMFS032D01+           ATGAACGAAAGG                                                
JMSF002J06+           ATGAACGAAAGGAAATGTGATGTTGTTTGCGTTTTTGGTTGGTGATTGCGATGGCATTGG
                      ____________________________________________________________
consensus             ATGAACGAAAGGAAATGTGATGTTGTTTGCGTTTTTGGTTGGTGATTGCGATGGCATTGG
 
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JMSF002J06+           GGCTTCAGGGGGAGTAAATATATACGGATTGTGGAGGAGATTGGATGGAGGTTTCGGAGA
                      ____________________________________________________________
consensus             GGCTTCAGGGGGAGTAAATATATACGGATTGTGGAGGAGATTGGATGGAGGTTTCGGAGA
 
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JMSF002J06+           AGCCATGGGAATGGGCATTCAAGGATACAACTAAGGTACAGATGGTTAACGCGAAGTTCC
                      ____________________________________________________________
consensus             AGCCATGGGAATGGGCATTCAAGGATACAACTAAGGTACAGATGGTTAACGCGAAGTTCC