Contig 013197:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138D11Sequence612013197 (2)ref|XP_007039579.1|5e-87CheY-like two-component responsive regulator family protein isoform 2 [Theobrom
JMFS167C04Sequence628013197 (2)ref|XP_007039579.1|5e-68CheY-like two-component responsive regulator family protein isoform 2 [Theobrom

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS138D11+ GCTGTTTTCCCGTATCGTTTCACTAGAGTTCTGAGCATCTGCACCGCTATTTC
                      ____________________________________________________________
consensus GCTGTTTTCCCGTATCGTTTCACTAGAGTTCTGAGCATCTGCACCGCTATTTC
 
. : . : . : . : . : . :
JMFS138D11+ TCGACTCGAGCTGCAACATCGAAACGATGGATTCTTTGACGGGCTTAAGCGACTCAGACA
                      ____________________________________________________________
consensus TCGACTCGAGCTGCAACATCGAAACGATGGATTCTTTGACGGGCTTAAGCGACTCAGACA
 
. : . : . : . : . : . :
JMFS138D11+ CATCCTTTTCCCCTGCATTGAATGCCTTATGAACAACATGCTGCCATATATTCCTCAATT
JMFS167C04+ ACAACATGCTGCCATATATTCCTCAATT
                      ____________________________________________________________
consensus CATCCTTTTCCCCTGCATTGAATGCCTTATGAACAACATGCTGCCATATATTCCTCAATT
 
. : . : . : . : . : . :
JMFS138D11+ TGTCATCTGATAGCGGTTTCTGAAGAAACTCAACTGCACCGAGCGCAATGCACTTCATCA
JMFS167C04+ TGTCATCTGATAGCGGTTTCTGAAGAAACTCAACTGCACCGAGCGCAATGCACTTCATCA
                      ____________________________________________________________
consensus TGTCATCTGATAGCGGTTTCTGAAGAAACTCAACTGCACCGAGCGCAATGCACTTCATCA
 
. : . : . : . : . : . :
JMFS138D11+ TGGTATTAAGGCAGTGGATATTTGAGGTCATTATGGTGGGTAAATCTTTAGCAGTTTCAA
JMFS167C04+ TGGTATTAAGGCAGTGGATATTTGAGGTCATTATGGTGGGTAAATCTTTAGCAGTTTCAA
                      ____________________________________________________________
consensus TGGTATTAAGGCAGTGGATATTTGAGGTCATTATGGTGGGTAAATCTTTAGCAGTTTCAA
 
. : . : . : . : . : . :
JMFS138D11+ GAAATTTGAATGCCTCATCGCTGTTTCCGGTATTGACCTCTACGATTGCAACATGAAACG
JMFS167C04+ GAAATTTGAATGCCTCATCGCTGTTTCCGGTATTGACCTCTACGATTGCAACATGAAACG
                      ____________________________________________________________
consensus GAAATTTGAATGCCTCATCGCTGTTTCCGGTATTGACCTCTACGATTGCAACATGAAACG
 
. : . : . : . : . : . :
JMFS138D11+ CCTCAGATTTGTTTGAGATTGCCAATAAAGCTTCATTCTCTTTTTGGAATGTAGAAACTA
JMFS167C04+ CCTCAGATTTGTTTGAGATTGCCAATAAAGCTTCATTCTCTTTTTGGAATGTAGAAACTA
                      ____________________________________________________________
consensus CCTCAGATTTGTTTGAGATTGCCAATAAAGCTTCATTCTCTTTTTGGAATGTAGAAACTA
 
. : . : . : . : . : . :
JMFS138D11+ TATAGTTCATTTCCTCAAGCTTTGATCTCATCTCAGCAGCAGAATTGGTGTCCTCATCAA
JMFS167C04+ TATAGTTCATTTCCTCAAGCTTTGATCTCATCTCAGCAGCAGAATTGGTGTCCTCATCAA
                      ____________________________________________________________
consensus TATAGTTCATTTCCTCAAGCTTTGATCTCATCTCAGCAGCAGAATTGGTGTCCTCATCAA
 
. : . : . : . : . : . :
JMFS138D11+ GAAGGAGGACCCTAAGGCCCTTAGGGAAATCTTTCCAATCCAATAAATCATTAGCAGTGC
JMFS167C04+ GAAGGAGGACCCTAAGGCCCTTAGGGAAATCTTTCCAATCCAATAAATCATTAGCAGTGC
                      ____________________________________________________________
consensus GAAGGAGGACCCTAAGGCCCTTAGGGAAATCTTTCCAATCCAATAAATCATTAGCAGTGC
 
. : . : . : . : . : . :
JMFS138D11+ AAACCATTGCTGATTGGCATCCTATCCTTCTCAGGCAGCCTTTCCACTCAAAATATGGCC
JMFS167C04+ AAACCATTGCTGATTGGCATCCTATCCTTCTCAGGCAGCCTTTCCACTCAAAATATGGCC
                      ____________________________________________________________
consensus AAACCATTGCTGATTGGCATCCTATCCTTCTCAGGCAGCCTTTCCACTCAAAATATGGCC
 
. : . : . : . : . : . :
JMFS138D11+ ACTTATCAGCATCATCTAA
JMFS167C04+ ACTTATCAGCATCATCTAATCACTCTGATGAATTTCCAAAAAAGAGAGGAGCTTTTGCTC
                      ____________________________________________________________
consensus ACTTATCAGCATCATCTAATCACTCTGATGAATTTCCAAAAAAGAGAGGAGCTTTTGCTC
 
. : . : . : . : . : . :
JMFS167C04+ ACTTAGCTTGATTTCTAGCTTGCACTTAACCTTCTTTAGGGGATGTTGTATCTAGCTGTA
                      ____________________________________________________________
consensus ACTTAGCTTGATTTCTAGCTTGCACTTAACCTTCTTTAGGGGATGTTGTATCTAGCTGTA
 
. : . : . : . : . : . :
JMFS167C04+ CAGAAAGAAACAGATACCAAAGAGAGAGAAATAGGCAGTACATAGACTGTGAAAGAGAGA
                      ____________________________________________________________
consensus CAGAAAGAAACAGATACCAAAGAGAGAGAAATAGGCAGTACATAGACTGTGAAAGAGAGA