Contig 013196:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS165H04Sequence617013196 (6)ref|XP_009606961.1|7e-54PREDICTED: SUMO-activating enzyme subunit 2 [Nicotiana tomentosiformis]
JMSF017A19Sequence236013196 (6)713008569 (6)ref|XP_006362029.1|8e-55PREDICTED: SUMO-activating enzyme subunit 2-like [Solanum tuberosum]
JMSF026M23Sequence644013196 (6)ref|XP_009606961.1|1e-87PREDICTED: SUMO-activating enzyme subunit 2 [Nicotiana tomentosiformis]484008569 (6)ref|XP_006362029.1|2e-11PREDICTED: SUMO-activating enzyme subunit 2-like [Solanum tuberosum]
JMSF031I03Sequence643013196 (6)ref|XP_009606961.1|1e-86PREDICTED: SUMO-activating enzyme subunit 2 [Nicotiana tomentosiformis]779008569 (6)ref|XP_006362029.1|4e-66PREDICTED: SUMO-activating enzyme subunit 2-like [Solanum tuberosum]
JMSF036L17Sequence664013196 (6)ref|XP_009606961.1|5e-92PREDICTED: SUMO-activating enzyme subunit 2 [Nicotiana tomentosiformis]768008569 (6)ref|XP_006362029.1|4e-63PREDICTED: SUMO-activating enzyme subunit 2-like [Solanum tuberosum]
JMSF045E17Sequence847013196 (6)ref|XP_009606961.1|3e-139PREDICTED: SUMO-activating enzyme subunit 2 [Nicotiana tomentosiformis]789008569 (6)ref|XP_006362029.1|1e-84PREDICTED: SUMO-activating enzyme subunit 2-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045E17+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045E17+           CTGACGAACTAGAAGCATCATTAGAACGGACATTTAGATCATTTGCCTGATTCTTGTCCC
                      ____________________________________________________________
consensus             CTGACGAACTAGAAGCATCATTAGAACGGACATTTAGATCATTTGCCTGATTCTTGTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045E17+           CAAAAAGCTTTGCAAAAAGCAGATCTTTTGCCCATACAATGCAGTGAACAAACTTTGAAG
                      ____________________________________________________________
consensus             CAAAAAGCTTTGCAAAAAGCAGATCTTTTGCCCATACAATGCAGTGAACAAACTTTGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045E17+           GAGTACTTGTAATCGTGCACACAGGGTAACTCTTAGGAGCTGGTTTAGGCTGGCACTCAT
                      ____________________________________________________________
consensus             GAGTACTTGTAATCGTGCACACAGGGTAACTCTTAGGAGCTGGTTTAGGCTGGCACTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+                                  TGCACAGTAACCTGTCCAAGGAATCCAGTTGTCCCAC
JMSF031I03+                                  TGCACAGTAACCTGTCCAAGGAATCCAGTTGTCCCAC
JMSF036L17+             CATTCTGTTTTTCCTTTCACATGCACAGTAACCTGTCCAAGGAATCCAGTTGTCCCAC
JMSF045E17+           AACATTCTGTTTTTCCTTTCACATGCACAGTAACCTGTCCAAGGAATCCAGTTGTCCCAC
                      ____________________________________________________________
consensus             AACATTCTGTTTTTCCTTTCACATGCACAGTAACCTGTCCAAGGAATCCAGTTGTCCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           TCTCAACCAATGGAACACCAGCTGCCAAGCAAAGGCGGTTCACATGTCGCCTAGCATCTA
JMSF031I03+           TCTCAACCAATGGAACACCAGCTGCCAAGCAAAGGCGGTTCACATGTCGCCTAGCATCTA
JMSF036L17+           TCTCAACCAATGGAACACCAGCTGCCAAGCAAAGGCGGTTCACATGTCGCCTAGCATCTA
JMSF045E17+           TGTCAACCAATGGAACACCAGCTGCCAAGCAAAGGCGGTTCACATGTCGCCTAGCATCTA
JMFS165H04+                                                     CATGTCGCCTAGCATCTA
                      ____________________________________________________________
consensus             TCTCAACCAATGGAACACCAGCTGCCAAGCAAAGGCGGTTCACATGTCGCCTAGCATCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           AATTGTCAAGCCCATTTAGAACAACATTGAATTCCTTGAAGAAATCAACACCGAAGTTGG
JMSF031I03+           AATTGTCAAGCCCATTTAGAACAACATTGAATTCCTTGAAGAAATCAACACCGAAGTTGG
JMSF036L17+           AATTGTCAAGCCCATTTAGAACAACATTGAATTCCTTGAAGAAATCAACACCGAAGTTGG
JMSF045E17+           AATTGTCAAGCCCATTTAGAACAACATTGAATTCCTTGAAGAAATCAACACCGAAGTTGG
JMFS165H04+           AATGTCANAGCCCATTTAGAACAACATTGAATCCC-TGAAGAAATCAACACCGAAGTTGG
                      ____________________________________________________________
consensus             AATTGTCAAGCCCATTTAGAACAACATTGAATTCCTTGAAGAAATCAACACCGAAGTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
JMSF031I03+           GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
JMSF036L17+           GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
JMSF045E17+           GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
JMFS165H04+           GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
                      ____________________________________________________________
consensus             GATCTTTAACATTTGCATGGTAAGGTTCAATTTTTATTCCAGGCCTAAATTTTAAGACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
JMSF031I03+           CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
JMSF036L17+           CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
JMSF045E17+           CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
JMFS165H04+           CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
                      ____________________________________________________________
consensus             CTTCCCTAGCAACTTTGGCTTTAGATTGGCCGACATGAGACTGCCGGAATAAAAACTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
JMSF031I03+           TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
JMSF036L17+           TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
JMSF045E17+           TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
JMFS165H04+           TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
                      ____________________________________________________________
consensus             TGTTTAAGTTGCTTACTTCTATTGTGTCCATGTCAATGATGTGAATGTCTTGAAAGCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
JMSF031I03+           AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
JMSF036L17+           AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
JMSF045E17+           AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
JMFS165H04+           AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
                      ____________________________________________________________
consensus             AGAGAGCAAGGTTTTTTAGAAGCTCACAGCCAATGCCACCGGCACCAACCATGAGTACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
JMSF031I03+           TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
JMSF036L17+           TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
JMSF017A19+                     GATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
JMSF045E17+           TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
JMFS165H04+           TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
                      ____________________________________________________________
consensus             TTGCGGCCTTGATTGCGGACATCTGTTCCTCGGAAGCCATGAGATGAGAGGAGATAAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
JMSF031I03+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTCGTGTACTACATAG
JMSF036L17+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
JMSF017A19+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
JMSF045E17+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
JMFS165H04+           GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
                      ____________________________________________________________
consensus             GAGATACTGAGAGGGTAGAGTGTGACGTCGTACGATAGCACCACGTTGTGTACTACATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
JMSF031I03+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
JMSF036L17+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
JMSF017A19+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
JMSF045E17+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
JMFS165H04+           ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
                      ____________________________________________________________
consensus             ACAGACAGAAAGGAGAATCTAGACGGGGTTTGGCCGGAAAATTCGAGTTCGAGTTCGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
JMSF031I03+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
JMSF036L17+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
JMSF017A19+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
JMSF045E17+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
JMFS165H04+           AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
                      ____________________________________________________________
consensus             AAAGTACTCTAAAAGAGAAATCTCTGTCGCTGCACGAAGGCGTAATCACTGCTCAAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF026M23+           TTCT                                                        
JMSF031I03+           TTCT                                                        
JMSF036L17+           TTCTT                                                       
JMSF017A19+           TTCTT                                                       
JMSF045E17+           TTCTT                                                       
JMFS165H04+           TTCTTGTCCTGTACTCCGATGCGGCATGCCTTTTTAAACTTCTTCGCAGGCTGCGCTTCT
                      ____________________________________________________________
consensus             TTCTTGTCCTGTACTCCGATGCGGCATGCCTTTTTAAACTTCTTCGCAGGCTGCGCTTCT