Contig 013183:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS132H09Sequence624013183 (2)ref|XP_006355702.1|2e-21PREDICTED: scarecrow-like protein 14-like isoform X1 [Solanum tuberosum] ref|XP
JMFS152D07Sequence623013183 (2)ref|XP_006355702.1|1e-20PREDICTED: scarecrow-like protein 14-like isoform X1 [Solanum tuberosum] ref|XP

Alignment

This contig is upended


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JMFS132H09+                                 ACTGCTATCACCATAGTTTTCATTTCGATCCAAATCAG
JMFS152D07+                                                  TTTCATTTCGATCCAAATCAG
                      ____________________________________________________________
consensus                                   ACTGCTATCACCATAGTTTTCATTTCGATCCAAATCAG
 
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JMFS132H09+           GAACTCTGTGAAGATTCGGGGATGGCGGGTACTCCTCCCCAATAAGCTCGTAAAATGATC
JMFS152D07+           GAACTCTGTGAAGATTCGGGGATGGCGGGTACTCCTCCCCAATAAGCTCGTAAAATGATC
                      ____________________________________________________________
consensus             GAACTCTGTGAAGATTCGGGGATGGCGGGTACTCCTCCCCAATAAGCTCGTAAAATGATC
 
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JMFS132H09+           TTTCTGCATCTTTAAGGGCAGCAGACTGTCGAAACATGTAGGCCTGCTTTTCCACGTTAT
JMFS152D07+           TTTCTGCATCTTTAAGGGCAGCAGACTGTCGAAACATGTAGGCCTGCTTTTCCACGTTAT
                      ____________________________________________________________
consensus             TTTCTGCATCTTTAAGGGCAGCAGACTGTCGAAACATGTAGGCCTGCTTTTCCACGTTAT
 
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JMFS132H09+           CTTCCATTAGCATCTGATTAATCCACTTAAGCATTTGATCCCTAAGATCATAATCTTCAT
JMFS152D07+           CTTCCATTAGCATCTGATTAATCCACTTAAGCATTTGATCCCTAAGATCATAATCTTCAT
                      ____________________________________________________________
consensus             CTTCCATTAGCATCTGATTAATCCACTTAAGCATTTGATCCCTAAGATCATAATCTTCAT
 
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JMFS132H09+           ATCCACCGTCTTCATTCAATAAGTTTACTACATTTAACCTCTGACCAGATTGAGGCACTG
JMFS152D07+           ATCCACCGTCTTCATTCAATAAGTTTACTACATTTAACCTCTGACCAGATTGAGGCACTG
                      ____________________________________________________________
consensus             ATCCACCGTCTTCATTCAATAAGTTTACTACATTTAACCTCTGACCAGATTGAGGCACTG
 
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JMFS132H09+           GGGCTTCTTCATTATTTAGATTTCCCATTTCTTCGTTCCGATCCACCAATGTCTCACAAA
JMFS152D07+           GGGCTTCTTCATTATTTAGATTTCCCATTTCTTCGTTCCGATCCACCAATGTCTCACAAA
                      ____________________________________________________________
consensus             GGGCTTCTTCATTATTTAGATTTCCCATTTCTTCGTTCCGATCCACCAATGTCTCACAAA
 
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JMFS132H09+           CTCCCTCATTCGCCATCGAAGTTGGATAAGAGAAAGTGGATAGACCTTCAACCCCTAAAT
JMFS152D07+           CTCCCTCATTCGCCATCGAAGTTGGATAAGAGAAAGTGGATAGACCTTCAACCCCTAAAT
                      ____________________________________________________________
consensus             CTCCCTCATTCGCCATCGAAGTTGGATAAGAGAAAGTGGATAGACCTTCAACCCCTAAAT
 
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JMFS132H09+           TTTGCCAGTTAACCAGATTTGGATTAGGAAAGATTGGTGGGGTTTCATCCTCAAAGTTAA
JMFS152D07+           TTTGCCAGTTAACCAGATTTGGATTAGGAAAGATTGGTGGGGTTTCATCCTCAAAGTTAA
                      ____________________________________________________________
consensus             TTTGCCAGTTAACCAGATTTGGATTAGGAAAGATTGGTGGGGTTTCATCCTCAAAGTTAA
 
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JMFS132H09+           ATTGGGATGTGGTCTCATATGGTCCCCTATCCATGGCCCTCTAGTCTTCAAGAATCAAGA
JMFS152D07+           ATTGGGATGTGGTCTCATATGGTCCCCTATCCATGGCCCTCTAGTCTTCAAGAATCAAGA
                      ____________________________________________________________
consensus             ATTGGGATGTGGTCTCATATGGTCCCCTATCCATGGCCCTCTAGTCTTCAAGAATCAAGA
 
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JMFS132H09+           ACCCTAATCTTCCTCAGAATCTCATTCCCCAATTCCTCAGAGCCCAAATTTCACAATCCA
JMFS152D07+           ACCCTAATCTTCCTCAGAATCTCATTCCCCAATTCCTCAGAGCCCAAATTTCACAATCCA
                      ____________________________________________________________
consensus             ACCCTAATCTTCCTCAGAATCTCATTCCCCAATTCCTCAGAGCCCAAATTTCACAATCCA
 
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JMFS132H09+           GAAACCCAAACTCTTGCCT                                         
JMFS152D07+           GAAACCCAAACTCTTGCCTTAACACAGAGCAATCCTTGAAGGCTGGGGGCAACAAACGAT
                      ____________________________________________________________
consensus             GAAACCCAAACTCTTGCCTTAACACAGAGCAATCCTTGAAGGCTGGGGGCAACAAACGAT