Contig 013178:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS138E12Sequence607013178 (2)ref|XP_010663036.1|7e-56PREDICTED: uncharacterized protein LOC100256409 isoform X2 [Vitis vinifera]
JMSF022A13Sequence695013178 (2)ref|XP_009801812.1|3e-69PREDICTED: telomere length regulation protein TEL2 homolog [Nicotiana sylvestri753024558ref|XP_009801812.1|1e-92PREDICTED: telomere length regulation protein TEL2 homolog [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF022A13+ AATAAGCAGTTTC
                      ____________________________________________________________
consensus AATAAGCAGTTTC
 
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JMSF022A13+ ATCCAAATTCTTGTCCCATTCTTCTGCTCCGGCAAGTATTTGAGTGGTAATATGCTTAAA
                      ____________________________________________________________
consensus ATCCAAATTCTTGTCCCATTCTTCTGCTCCGGCAAGTATTTGAGTGGTAATATGCTTAAA
 
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JMSF022A13+ AAATAAGGGTGATGAGAGTGAAGTAGGCGCACCTGCTCGTGCTTTGTCAGGAATAGATGT
                      ____________________________________________________________
consensus AAATAAGGGTGATGAGAGTGAAGTAGGCGCACCTGCTCGTGCTTTGTCAGGAATAGATGT
 
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JMSF022A13+ AATAAGTTGCGCCACCCTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
JMFS138E12+ CTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
                      ____________________________________________________________
consensus AATAAGTTGCGCCACCCTTTCAGCATTTGAGCACACTGCATTGAGATTATGAGTGCCAAG
 
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JMSF022A13+ ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
JMFS138E12+ ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
                      ____________________________________________________________
consensus ACCTCTTCCTTGTAAGCAAGGAACTAATGCCTGTATGACCTCAGTGAATTGACCATTTGT
 
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JMSF022A13+ AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
JMFS138E12+ AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
                      ____________________________________________________________
consensus AAAAAACACATCATATACATGTACTCTTGCAGAAGTGGGGAAACATGCTAGCCAATCCAA
 
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JMSF022A13+ AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
JMFS138E12+ AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
                      ____________________________________________________________
consensus AGCCACATCATGTAACAAAACTCGTGCCAGCATTGGAAATGCAGCACCTTTATAGAAAAT
 
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JMSF022A13+ CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
JMFS138E12+ CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
                      ____________________________________________________________
consensus CTGTTGCCATTGACTTCTCTTATCAGAATCTGGCACCAGCGCGCTTTGAACCTGTTCTCT
 
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JMSF022A13+ GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
JMFS138E12+ GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
                      ____________________________________________________________
consensus GAACTGCATATCAATACTACCTAAGAAGGAGCAAGAATCGACGGGGAATAGCGAAACAGC
 
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JMSF022A13+ GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
JMFS138E12+ GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
                      ____________________________________________________________
consensus GAGAGAGTGAAGAGCGACGATGACTTGGTCGACGTGGCCTGCGTCCTTGATGGAGCAGAC
 
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JMSF022A13+ GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
JMFS138E12+ GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
                      ____________________________________________________________
consensus GACCCGGCCCACTTTCTCTGTAATTGCCTTCTCCACTTGTCTCCAGCAACTCTCTGGTCC
 
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JMSF022A13+ TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACAAGT
JMFS138E12+ TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACTAGT
                      ____________________________________________________________
consensus TGCATGGAAATCTTCCATGGCTGCCCAGGTAAGGTATAGTGATGTTTACAGAGTACTAGT
 
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JMSF022A13+ ACCCCTTCTGCTAGGTAG
JMFS138E12+ ACCCCTTCTGCTAGGTAGATTGCCTAGGAGTGCAATAAAGAATTATCAATTACATAATAC
                      ____________________________________________________________
consensus ACCCCTTCTGCTAGGTAGATTGCCTAGGAGTGCAATAAAGAATTATCAATTACATAATAC