Contig 013170:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS124C06Sequence574013170 (2)ref|XP_006342194.1|5e-62PREDICTED: pentatricopeptide repeat-containing protein At1g25360-like [Solanum
JMFS128H08Sequence607013170 (2)gb|KDO84745.1|6e-47hypothetical protein CISIN_1g0038682mg, partial [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS124C06+ TACTGGTCAGGCTGAAAGTTGT
                      ____________________________________________________________
consensus TACTGGTCAGGCTGAAAGTTGT
 
. : . : . : . : . : . :
JMFS124C06+ TTCTTTTCATATCATTGAAGACTTGTATAGCAGCATGGCCATCATTTTGATGCGAATAGC
                      ____________________________________________________________
consensus TTCTTTTCATATCATTGAAGACTTGTATAGCAGCATGGCCATCATTTTGATGCGAATAGC
 
. : . : . : . : . : . :
JMFS124C06+ CCGTGATCCTAGCGTTATAAAAAACCGTGTCGCGCATGCCTAAAGGGGTTCTATCAAAAA
JMFS128H08+ CCGTGATCCTAGCGTTATAGAAAACAGTGTCGCGCATGCTTAAAGGGGTTCTATCAAAAA
                      ____________________________________________________________
consensus CCGTGATCCTAGCGTTATAGAAAACCGTGTCGCGCATGCTTAAAGGGGTTCTATCAAAAA
 
. : . : . : . : . : . :
JMFS124C06+ TCTCTGCAGCGAGGTTGGGGTCCCCAGAAGCAAAATATGCAGCAATCATGGTCGTTCTAG
JMFS128H08+ TCTCTGCAGCGAGGTTGGGGTCCCCGGAAGCAGAATACGCAGCAAGCATGGTGGTTCTAG
                      ____________________________________________________________
consensus TCTCTGCAGCGAGGTTGGGGTCCCCGGAAGCAGAATATGCAGCAATCATGGTGGTTCTAG
 
. : . : . : . : . : . :
JMFS124C06+ CAACAATATCCGGTTGGGGAATTTCGTCAAACAGGTGGCGTGCGTACAGGAGGTTAGAGG
JMFS128H08+ CAACAATATCCGGCTGGGGAATTTCGTCGAACAGGTGGCGTGCGTAGGAGAGGTTGGAGG
                      ____________________________________________________________
consensus CAACAATATCCGGTTGGGGAATTTCGTCGAACAGGTGGCGTGCGTAGGGGAGGTTGGAGG
 
. : . : . : . : . : . :
JMFS124C06+ ACTTGCAATAGATATCGATGAGGCGGTTGAGGATGTGGGCACGAGGCTTGAACCCGGAGG
JMFS128H08+ ACTTGCAGTAGATATCGATGAGGCGGTTGAGGATGTGTGCACGGGGCTTGAAGCCGGAGG
                      ____________________________________________________________
consensus ACTTGCAGTAGATATCGATGAGGCGGTTGAGGATGTGTGCACGGGGCTTGAAGCCGGAGG
 
. : . : . : . : . : . :
JMFS124C06+ TGATCATGTTGGCATGGATGCTTCTAGCAAGAGAAGACGTAGCAGGGGTGTGTATGTTTG
JMFS128H08+ TGATCATGTTGGCATGGATGGCTGTAGCAAGAGAAGACGCAGCAGGGGTGTGAATGTTTG
                      ____________________________________________________________
consensus TGATCATGTTGGCATGGATGGTTGTAGCAAGAGAAGACGTAGCAGGGGTGTGTATGTTTG
 
. : . : . : . : . : . :
JMFS124C06+ AGGAGCAGAGTTGAAGGTGGGCCGCATAACGGGTGGCGAGTT
JMFS128H08+ AGGAGCAGAGTTGAAGGTGGGCCGCATAACGGCTGGCGAGTTGGCGGCAAATGTATATGC
                      ____________________________________________________________
consensus AGGAGCAGAGTTGAAGGTGGGCCGCATAACGGGTGGCGAGTTGGCGGCAAATGTATATGC
 
. : . : . : . : . : . :
JMFS128H08+ CTTGGGCCCAACTTTCAAAAGACTTGGCTGCAGCTGCGCCATTTTTCATCGTCATAGCTA
                      ____________________________________________________________
consensus CTTGGGCCCAACTTTCAAAAGACTTGGCTGCAGCTGCGCCATTTTTCATCGTCATAGCTA
 
. : . : . : . : . : . :
JMFS128H08+ TTTGCAGTAGTTATGAGGTTAGAAAGAAAGATGCTTCATTCTCCATAGATGAAAGTCGGA
                      ____________________________________________________________
consensus TTTGCAGTAGTTATGAGGTTAGAAAGAAAGATGCTTCATTCTCCATAGATGAAAGTCGGA
 
. : . : . : . : . : . :
JMFS128H08+ AGCTTTTGTTCACCATGAAGCCATACTTTGGGTGTTGGCAGTTTAACATACTTTCTCTCT
                      ____________________________________________________________
consensus AGCTTTTGTTCACCATGAAGCCATACTTTGGGTGTTGGCAGTTTAACATACTTTCTCTCT
 
. : . : . : . : . : . :
JMFS128H08+ CAACTTTAAAATGAACCTCTTACTTCACTTCAGAATTCAGGAATGAGGAAGGAGACTAAC
                      ____________________________________________________________
consensus CAACTTTAAAATGAACCTCTTACTTCACTTCAGAATTCAGGAATGAGGAAGGAGACTAAC