Contig 013162:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS121B07Sequence569013162 (2)ref|XP_007033988.1|9e-31Eukaryotic aspartyl protease family protein isoform 2 [Theobroma cacao] gb|EOY0
JMSF050M01Sequence652013162 (2)ref|XP_009795260.1|6e-35PREDICTED: aspartic proteinase-like protein 2 [Nicotiana sylvestris]695023654ref|XP_011013448.1|4e-45PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Populu

Alignment

This contig is upended


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JMSF050M01+                                                               ACTTGATC
                      ____________________________________________________________
consensus                                                                 ACTTGATC
 
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JMSF050M01+           AATATGAACATAATCATGAACATAGGACCCAACTGTTTTGCTTCCTTACACATAAGAAAT
                      ____________________________________________________________
consensus             AATATGAACATAATCATGAACATAGGACCCAACTGTTTTGCTTCCTTACACATAAGAAAT
 
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JMSF050M01+           CTCATATTCACAGCGCATATACTAGTGCCACAAGCTTTATATGGACCAGTGTTCAATGTA
JMFS121B07+                                          AAGCTTTATATGGACCAGTGTTCAATGTA
                      ____________________________________________________________
consensus             CTCATATTCACAGCGCATATACTAGTGCCACAAGCTTTATATGGACCAGTGTTCAATGTA
 
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JMSF050M01+           TAACAAAAATCTTGGTAACAATTAACCCAACATGCAGTCGAAGAGGCCTTTACATCATAC
JMFS121B07+           TAACAAAAATCTTGGTAACAATTAACCCAACATGCAGTCGAAGAGGCCTTTACATCATAC
                      ____________________________________________________________
consensus             TAACAAAAATCTTGGTAACAATTAACCCAACATGCAGTCGAAGAGGCCTTTACATCATAC
 
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JMSF050M01+           TGCACCAAATCTATCCCTAGGCTGCTCTTTTTCGGACAGCTGTCACAGCCAGCACAATTC
JMFS121B07+           TGCACCAAATCTATCCCTAGGCTGCTCTTTTTCGGACAGCTGTCACAGCCAGCACAATTC
                      ____________________________________________________________
consensus             TGCACCAAATCTATCCCTAGGCTGCTCTTTTTCGGACAGCTGTCACAGCCAGCACAATTC
 
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JMSF050M01+           ACCCATAGTATGTCACTCCCAGTATCAACATAGACATGATAGGCCTTTGGAGGAGTCCCA
JMFS121B07+           ACCCATAGTATGTCACTCCCAGTATCAACATAGACATGATAGGCCTTTGGAGGAGTCCCA
                      ____________________________________________________________
consensus             ACCCATAGTATGTCACTCCCAGTATCAACATAGACATGATAGGCCTTTGGAGGAGTCCCA
 
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JMSF050M01+           ATCATAAGCTTGGAATAGTGGAGTCCGACGCCACTGGGTTTTCTAGTTCCACCGATCGGG
JMFS121B07+           ATCATAAGCTTGGAATAGTGGAGTCCGACGCCACTGGGTTTTCTAGTTCCACCGATCGGG
                      ____________________________________________________________
consensus             ATCATAAGCTTGGAATAGTGGAGTCCGACGCCACTGGGTTTTCTAGTTCCACCGATCGGG
 
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JMSF050M01+           AAGTCGACGGCGCCAAAATTCGGCCGTGACGGCGTAGGTCGTGGGCCCTCAATCGCTCAG
JMFS121B07+           AAGTCGACGGCGCCAAAATTCGGCCGTGACGGCGTAGGTCGTGGGCCCTCAATCGCTCAG
                      ____________________________________________________________
consensus             AAGTCGACGGCGCCAAAATTCGGCCGTGACGGCGTAGGTCGTGGGCCCTCAATCGCTCAG
 
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JMSF050M01+           GTTGTAGCTCTCGTGTCCGCCATACTTATGGTGCAAGTTCAACACCAAGTTGTTCGAATA
JMFS121B07+           GTTGTAGCTCTCGTGTCCGCCATACTTATGGTGCAAGTTCAACACCAAGTTGTTCGAATA
                      ____________________________________________________________
consensus             GTTGTAGCTCTCGTGTCCGCCATACTTATGGTGCAAGTTCAACACCAAGTTGTTCGAATA
 
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JMSF050M01+           TCCATAGCCCAACAAGCACAAAGCCAACAGCAGTACAGTCTGGAGCTTCATTGCTATTTG
JMFS121B07+           TCCATAGCCCAACAAGCACAAAGCCAACAGCAGTACAGTCTGGAGCTTCATTGCTATTTG
                      ____________________________________________________________
consensus             TCCATAGCCCAACAAGCACAAAGCCAACAGCAGTACAGTCTGGAGCTTCATTGCTATTTG
 
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JMSF050M01+           CTACAATTTCCTTCAATTCTCGTTGCACGCTTGCCGGCGATGCTCACTTCCGCCATGGCT
JMFS121B07+           CTACAATTTCCTTCAATTCTCGTTGCACGCTTGCCGGCGATGCTCACTTCCGCCATGGCT
                      ____________________________________________________________
consensus             CTACAATTTCCTTCAATTCTCGTTGCACGCTTGCCGGCGATGCTCACTTCCGCCATGGCT
 
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JMSF050M01+           CTTCTTCTGCAAAACCATCACATCGGTTAGGAATTCCAATCCC                 
JMFS121B07+           CTTCTTCTGCAACACCATCACATCGGTTAGGAATTCCAATCCCATTCATTCCTCCTCTTC
                      ____________________________________________________________
consensus             CTTCTTCTGCAACACCATCACATCGGTTAGGAATTCCAATCCCATTCATTCCTCCTCTTC