Contig 013155:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017A12Sequence617013155 (8)ref|XP_009759852.1|256PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris]
JMFN025E17Sequence470013155 (8)ref|XP_008389028.1|62.0PREDICTED: uncharacterized protein LOC103451397 [Malus domestica]
JMFN025E22Sequence434013155 (8)ref|XP_011078122.1|68.2PREDICTED: uncharacterized protein LOC105161942 [Sesamum indicum]
JMFN025E23Sequence625013155 (8)ref|XP_009759852.1|282PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris]
JMFN025G19Sequence635013155 (8)ref|XP_009759852.1|286PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris]
JMFS108F03Sequence627013155 (8)ref|XP_009627314.1|171PREDICTED: uncharacterized protein LOC104117889 [Nicotiana tomentosiformis]
JMSF008M05Sequence365013155 (8)ref|XP_009759852.1|86.3PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris]816013155 (8)ref|XP_009759852.1|285PREDICTED: uncharacterized protein LOC104212331 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008M05- AGCGTTCACAAGGGATACCAAGAAACATTTCAAATCAGAGTTCATTA
                      ____________________________________________________________
consensus AGCGTTCACAAGGGATACCAAGAAACATTTCAAATCAGAGTTCATTA
 
. : . : . : . : . : . :
rJMSF008M05- TGATAAATCTGCAATGGTAAACATACTGACATGAAATAAGAGGAGATCCAGACTAGGATG
                      ____________________________________________________________
consensus TGATAAATCTGCAATGGTAAACATACTGACATGAAATAAGAGGAGATCCAGACTAGGATG
 
. : . : . : . : . : . :
JMFN025G19+ CAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
JMFN025E23+ GAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
rJMSF008M05- TCTCAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
                      ____________________________________________________________
consensus TCTCAGCAAAGGTGAGCAAAGATATCAGCGACTCGTATTCTGGGAAGCATGATACGAGGT
 
. : . : . : . : . : . :
JMFN025G19+ AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
JMFN025E23+ AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
JMFN017A12+ TTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
rJMSF008M05- AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
                      ____________________________________________________________
consensus AAGATCGTTTTGCAAGCTCGAAATCATCAAACTGGAAGGCAGGAGCACACGTACATCCAA
 
. : . : . : . : . : . :
JMFN025G19+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
JMFN025E23+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
JMFN017A12+ CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
rJMSF008M05- CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
                      ____________________________________________________________
consensus CTAACGCGAAGTCCTTCTCAGCGTCTCTTGGAGGATTTTTGACAGCTTTCTTCTTGTCAG
 
. : . : . : . : . : . :
JMFN025G19+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
JMFN025E23+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
JMFN017A12+ CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATAAATTTGGAGGAACTGTGT
rJMSF008M05- CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGAAACTGTGT
                      ____________________________________________________________
consensus CAGAGATGTCGATATCCTTTGTTGGGAAAGCACCAAACCATACATTTGGAGGAACTGTGT
 
. : . : . : . : . : . :
JMFN025G19+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFN025E23+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFN025E22+ ACACTAC
JMFN017A12+ ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
rJMSF008M05- ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
JMFS108F03+ AGGCCCGATGCCTGTTAACTTCACACTAC
                      ____________________________________________________________
consensus ACTGCACTTGTTGATTGTCTGCCAGGGGATCAGGCCCGATGCCTGTTAACTTCACACTAC
 
. : . : . : . : . : . :
JMFN025G19+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFN025E23+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFN025E22+ CATCAGTCTCGTTTAGCTGTACCGCCGTAATCGATTCTCCGGTGTGAAAGTGCCATGCTT
JMFN025E17+ GTAATAGTGCCATGTTT
JMFN017A12+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
rJMSF008M05- CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
JMFS108F03+ CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
                      ____________________________________________________________
consensus CATCAGTCTCGTTTAGCTCTACCACCGTAATAGATTCTCCTGTGTAAAAGTGCCATGTTT
 
. : . : . : . : . : . :
JMFN025G19+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMFN025E23+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMFN025E22+ CTCCCATTGGGATTCGGCGCAAGTGTGAAACACTCCCAGAAGGCAGCAAGGAGTAAATAG
JMFN025E17+ CTGGCATTGGGATTCGGAACAAGTGAGAAACACTCCCAGAAGTCAGCAAGAAGTAAATA-
JMFN017A12+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
rJMSF008M05- CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
JMSF008M05+ A-
JMFS108F03+ CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
                      ____________________________________________________________
consensus CTGCCATTGGGATTCGGTGCAAGTGAGAAACACTCCCAGAAGGCAGCAAGAAGTAAATA-
 
. : . : . : . : . : . :
JMFN025G19+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E23+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E22+ GATGTGCTCGCAGGTCGATCACCCTGGTAAGGTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFN025E17+ GATGTACTC
JMFN017A12+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
rJMSF008M05- GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMSF008M05+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
JMFS108F03+ GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
                      ____________________________________________________________
consensus GATGTACTCACAGGTCGATCAACCTTGTAA-GTAGGGGGGAGATGAGATTTAGAGAGGTG
 
. : . : . : . : . : . :
JMFN025G19+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFN025E23+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFN025E22+ CGGGGCGAAGTCTGTGAAGGTTTCAGAATAGAAGCCGCCTTGTGGGTGCGGCTTCAGAT
JMFN017A12+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
rJMSF008M05- CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMSF008M05+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
JMFS108F03+ CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
                      ____________________________________________________________
consensus CACGGAGAAGTCTCTGAAGGTTTCAGAATAGAAGCCGCCTTCTGGGTGCGACTTCAGATC
 
. : . : . : . : . : . :
JMFN025G19+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFN025E23+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFN017A12+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
rJMSF008M05- CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMSF008M05+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
JMFS108F03+ CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
                      ____________________________________________________________
consensus CAGTTTAGCTACAAGCTTCGAGACAGTTGAATCCATTTGATTGAGAATTGAGAATTGAGA
 
. : . : . : . : . : . :
JMFN025G19+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAA
JMFN025E23+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAA
JMFN017A12+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
rJMSF008M05- ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
JMSF008M05+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
JMFS108F03+ ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
                      ____________________________________________________________
consensus ATTGAGATTGCTTCTGACAGTGTAATCAATCAGAGGACAAAGGTTTCACTTAGGCTTTCC
 
. : . : . : . : . : . :
JMFN017A12+ TAGATTACCTTTACCTTTTTTCTTACTC
rJMSF008M05- TAGATTACCTTTACCTTTTTTCTNACTCCTATCC
JMSF008M05+ TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
JMFS108F03+ TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
                      ____________________________________________________________
consensus TAGATTACCTTTACCTTTTTTCTTACTCCTATCCCATCCTATCCTATTCTCGGAGTCTCA
 
. : . : . : . : . : . :
JMSF008M05+ GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
JMFS108F03+ GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
                      ____________________________________________________________
consensus GGTTGTTCCTTGTTGGAGTCCAACAATGCGGCTTTTCGGGTGGTTGGAGAAAATGACGGT
 
. : . : . : . : . : . :
JMSF008M05+ TGG
JMFS108F03+ TGGCAAAGGGCCTAATCACTGCACAATTTCTTAGTACACTTTTTTCCGATACGAGGTTGT
                      ____________________________________________________________
consensus TGGCAAAGGGCCTAATCACTGCACAATTTCTTAGTACACTTTTTTCCGATACGAGGTTGT
 
. : . : . : . : . : . :
JMFS108F03+ CTTCACTCCCATTTTTCTACTGTCAAAACCAAACTCCATGACTTTCTGACCCAAACTCCA
                      ____________________________________________________________
consensus CTTCACTCCCATTTTTCTACTGTCAAAACCAAACTCCATGACTTTCTGACCCAAACTCCA