Contig 013133:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008M18Sequence531013133 (7)ref|XP_010680658.1|7e-45PREDICTED: trihelix transcription factor GT-2-like [Beta vulgaris subsp. vulgar
JMFS022G01Sequence539013133 (7)ref|XP_009618661.1|7e-53PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis]
JMFS023C01Sequence341013133 (7)ref|XP_003536427.1|5e-41PREDICTED: trihelix transcription factor GT-2-like [Glycine max]
JMFS037B10Sequence493013133 (7)ref|XP_009618661.1|2e-51PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis]
JMFS080E03Sequence608013133 (7)ref|XP_009618661.1|2e-57PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis]
JMFS081C08Sequence558013133 (7)ref|XP_009618661.1|5e-56PREDICTED: trihelix transcription factor GTL1-like [Nicotiana tomentosiformis]
JMFS128C10Sequence305013133 (7)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS081C08+ AGGAGTGT
JMFS080E03+ AGGAGTGT
                      ____________________________________________________________
consensus AGGAGTGT
 
. : . : . : . : . : . :
JMFS081C08+ GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFS037B10+ GATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFS022G01+ GATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
JMFF008M18+ GC
JMFS080E03+ GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
                      ____________________________________________________________
consensus GTTCGAAAGCCTCGAGCTGATCGAAAAACCGATAAGTTTTGCCGTCGGCCTTGGAGGCGC
 
. : . : . : . : . : . :
JMFS081C08+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS023C01+ TCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS037B10+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS022G01+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFF008M18+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
JMFS080E03+ GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
                      ____________________________________________________________
consensus GTCCATCCTTTGTCCGCTTATGATACTTGTAAACGTTCTCGAATTTCTCCTTGCATTTCT
 
. : . : . : . : . : . :
JMFS081C08+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS023C01+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS037B10+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS022G01+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFF008M18+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
JMFS080E03+ TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
                      ____________________________________________________________
consensus TGGAGCTTCGATGGTATCCCAGCTCCGCCATTTTCCTGGAAACTTCCTCCCACAGCGGGC
 
. : . : . : . : . : . :
JMFS081C08+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS023C01+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS037B10+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS022G01+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFF008M18+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
JMFS080E03+ CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
                      ____________________________________________________________
consensus CTTTCAGGCTTGAGTCTCTGAAAACAACATCCATATCCGACCTAATTTTCAATAGAGCCA
 
. : . : . : . : . : . :
JMFS081C08+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS023C01+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS037B10+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS022G01+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS128C10+ TCCTGCATGGGCCGCCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFF008M18+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
JMFS080E03+ AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
                      ____________________________________________________________
consensus AAGTCTCCTGCCTGGGCCACCTATTTCCGCCGGAATTCCTCTCCGCTTCCTCCAGCCTTC
 
. : . : . : . : . : . :
JMFS081C08+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS023C01+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS037B10+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS022G01+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS128C10+ CCGCCGTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFF008M18+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
JMFS080E03+ CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
                      ____________________________________________________________
consensus CCGCCTTGTCTTCCTCCCCGTAGCCACCCGTCAGCGCTCCCGCGGCGGCGCCACCCACGT
 
. : . : . : . : . : . :
JMFS081C08+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS023C01+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGA
JMFS037B10+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS022G01+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS128C10+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFF008M18+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
JMFS080E03+ CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
                      ____________________________________________________________
consensus CGCTGCTGTTCCCACCACCACCTGCAGCACTACCAGCTCCGCCACTCTCCGGAGCTTCGG
 
. : . : . : . : . : . :
JMFS081C08+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS037B10+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS022G01+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS128C10+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFF008M18+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
JMFS080E03+ GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
                      ____________________________________________________________
consensus GTGGCGCTGCCCCATCGGCGGCGGCGCTTATCAGGCCGGACACTCCCAGCATCTCTGATA
 
. : . : . : . : . : . :
JMFS081C08+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS037B10+ CGATACGATACGATGCCAAACAATCCTCAAC
JMFS022G01+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS128C10+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFF008M18+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
JMFS080E03+ CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
                      ____________________________________________________________
consensus CGATACGATACGATGCCAAACAATCCTCAACGTACACCAGCAAGTAGATGAAGAAGAAGA
 
. : . : . : . : . : . :
JMFS081C08+ AGAAAGAGGA
JMFS022G01+ AGAAAGAGGA
JMFS128C10+ AGAAAGAGGA
JMFF008M18+ AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGAT
JMFS080E03+ AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGATGGTGAATTCTG
                      ____________________________________________________________
consensus AGAAAGAGGAGGCTCCCCCCAGACTGAAAAAAACCAAAATAAAAAAGATGGTGAATTCTG