Contig 013117:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006E10Sequence471013117 (7)825013799 (5)ref|XP_009619492.1|1e-128PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMFF042H08Sequence629013117 (7)ref|XP_006346158.1|5e-11PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li621013799 (5)ref|XP_009619494.1|5e-77PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMFS062F01Sequence603013117 (7)
JMSF015C17Sequence446013117 (7)781013799 (5)ref|XP_009619492.1|2e-131PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF032K12Sequence701013117 (7)ref|XP_006346158.1|3e-19PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li764013799 (5)ref|XP_009619492.1|9e-130PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF036J16Sequence647013117 (7)ref|XP_006346158.1|1e-16PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li748013799 (5)ref|XP_009619492.1|1e-125PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is
JMSF038B16Sequence646013117 (7)ref|XP_006346158.1|5e-18PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic-li870015114ref|XP_009619492.1|6e-157PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic is

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032K12+ AAAATGCCG
                      ____________________________________________________________
consensus AAAATGCCG
 
. : . : . : . : . : . :
JMSF038B16+ AGAACCGGCA
JMSF032K12+ AAAGCCCGAGAAGCAATGCCAACACCAAACCTTGCTCTTTAAAAACTCTAAGAACCGGCA
JMSF036J16+ AGAACCGGCA
                      ____________________________________________________________
consensus AAAGCCCGAGAAGCAATGCCAACACCAAACCTTGCTCTTTAAAAACTCTAAGAACCGGCA
 
. : . : . : . : . : . :
JMSF038B16+ AAACCTTTGGCCAAAAATTTCTCAAGGCCACAAGAGTTTGGTCCAAAGCCCCGTAGCGCG
JMSF032K12+ AAACCTTTGGCCAAAAATTTCTCAAGGCCACAAGAGTTTGGTCCAAAGCCCCGTAGCGCG
JMFF042H08+ TTGGTCCAAAGCCCCGTAGCGCG
JMSF036J16+ AAACCTTTGGCCAAAAATTTCTCAAGGCCACAAGAGTTTGGTCCAAAGCCCCGTAGCGCG
                      ____________________________________________________________
consensus AAACCTTTGGCCAAAAATTTCTCAAGGCCACAAGAGTTTGGTCCAAAGCCCCGTAGCGCG
 
. : . : . : . : . : . :
JMSF038B16+ CACTGACAACCTCTTCAATAGCAAGCACTCTCCGACAGCCAAACACAAAAACCCCACAAA
JMSF032K12+ CACTGACAACCTCTTCAATAGCAAGCACTCTCCGACAGCCAAACACAAAAACCCCACAAA
JMFF042H08+ CACTGACAACCTCTTCAATAGCAAGCACTCTCCGACAGCCAAACACAAAAACCCCACAAA
JMSF036J16+ CACTGACAACCTCTTCAATAGCAAGCACTCTCCGACAGCCAAACACAAAAACCCCACAAA
JMFS062F01+ AAA
                      ____________________________________________________________
consensus CACTGACAACCTCTTCAATAGCAAGCACTCTCCGACAGCCAAACACAAAAACCCCACAAA
 
. : . : . : . : . : . :
JMSF038B16+ CTAAAGCTACCAAAATCAAACCCCTCTTCAACAAAACCTCCACGAGCCCCACATTCACAC
JMSF032K12+ CTAAAGCTACCAAAATCAAACCCCTCTTCAACAAAACCTCCACGAGCCCCACATTCACAC
JMFF006E10+ GCCCCACATTCACAC
JMSF015C17+ CCACATTCACAC
JMFF042H08+ CTAAAGCTACCAAAATCAAACCCCTCTTCAACAAAACCTCCACGAGCCCCACATTCACAC
JMSF036J16+ CTAAAGCTACCAAAATCAAACCCCTCTTCAACAAAACCTCCACGAGCCCCACATTCACAC
JMFS062F01+ CTAAAGCTACCAAAATCAAACCCCTCTTCAACANAACCTCCACGAGCCCCACATTCACAC
                      ____________________________________________________________
consensus CTAAAGCTACCAAAATCAAACCCCTCTTCAACAAAACCTCCACGAGCCCCACATTCACAC
 
. : . : . : . : . : . :
JMSF038B16+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMSF032K12+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMFF006E10+ TCGTTACGCCATCTTCAACATTTCGGCGAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMSF015C17+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMFF042H08+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMSF036J16+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
JMFS062F01+ TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
                      ____________________________________________________________
consensus TCGTTACGCCATCTTCAACATTTCGGCAAGCACAACCGCGACTTACCGATAGCGGGCTCA
 
. : . : . : . : . : . :
JMSF038B16+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMSF032K12+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMFF006E10+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMSF015C17+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMFF042H08+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMSF036J16+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
JMFS062F01+ AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
                      ____________________________________________________________
consensus AACCGAGTCGACTCGGATGGAGCTCGGAGTTGAAGAAAATTCTAGAACCGTACGGTACGG
 
. : . : . : . : . : . :
JMSF038B16+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMSF032K12+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMFF006E10+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMSF015C17+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMFF042H08+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMSF036J16+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
JMFS062F01+ AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
                      ____________________________________________________________
consensus AGTAACCCCCTCTGCCGGCGGATTTTGCAGCGCAGCACAGACTCCTGGCAGAGATACCGG
 
. : . : . : . : . : . :
JMSF038B16+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMSF032K12+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMFF006E10+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMSF015C17+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMFF042H08+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMSF036J16+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
JMFS062F01+ CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
                      ____________________________________________________________
consensus CGGAAATCCCGAACCGACGGCTGCGAAGAACTCTGAATGCGGATCGATTCAAGAGATAGG
 
. : . : . : . : . : . :
JMSF038B16+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMSF032K12+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMFF006E10+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMSF015C17+ GTTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMFF042H08+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMSF036J16+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
JMFS062F01+ GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
                      ____________________________________________________________
consensus GCTCAAGAGCCGCTACTGCTTCCATGTGGATTCGCAGAAACTATGCGTGAAATTAGAAAA
 
. : . : . : . : . : . :
JMSF038B16+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMSF032K12+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMFF006E10+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMSF015C17+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMFF042H08+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMSF036J16+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
JMFS062F01+ ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
                      ____________________________________________________________
consensus ACAAGTGGAAATTCAATCCAAAATTCCAAATAATATACGAGTAGATAGAGCGGGAAGGGT
 
. : . : . : . : . : . :
JMSF038B16+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMSF032K12+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMFF006E10+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMSF015C17+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMFF042H08+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMSF036J16+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
JMFS062F01+ AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
                      ____________________________________________________________
consensus AGAGATTAGATCTTCTTGCGGAGCTTGAAGAGATGGAAACGTGCAGACGAAGAGCTCATC
 
. : . : . : . : . : . :
JMSF038B16+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGAC
JMSF032K12+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGAC
JMFF006E10+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGACGACTC
JMSF015C17+ CTGCTCGGCCTC
JMFF042H08+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGACGACTC
JMSF036J16+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGACGACTC
JMFS062F01+ CTGCTCGGCCTCTACTGCGAGCTGCGTGGACGACTCAATTTCTTTGCTCGTGTGCTTCTG
                      ____________________________________________________________
consensus CTGCTCGGCCTCTACTGCGAGCTGCGTGGACGACTCAATTTCTTTGCTCGTGTGCTTCTG
 
. : . : . : . : . : . :
JMFS062F01+ CCAAAAGCACAGGTTTCAACTTGCAGGTGTGAAATGACCGGAGTATCCCCCGCTTCTCTG
                      ____________________________________________________________
consensus CCAAAAGCACAGGTTTCAACTTGCAGGTGTGAAATGACCGGAGTATCCCCCGCTTCTCTG