Contig 013097:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041G16Sequence620004661 (2)ref|XP_009771340.1|5e-26PREDICTED: uncharacterized protein LOC104221895 isoform X1 [Nicotiana sylvestri634013097 (4)ref|XP_009771341.1|5e-51PREDICTED: uncharacterized protein LOC104221895 isoform X2 [Nicotiana sylvestri
JMFF047I17Sequence491004661 (2)ref|XP_009771340.1|5e-16PREDICTED: uncharacterized protein LOC104221895 isoform X1 [Nicotiana sylvestri314013097 (4)
JMFS031B03Sequence423013097 (4)ref|XP_004251127.1|54.7PREDICTED: uncharacterized protein LOC101256453 [Solanum lycopersicum]
JMFS039B11Sequence574013097 (4)ref|XP_009771340.1|4e-38PREDICTED: uncharacterized protein LOC104221895 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMFF041G16+                      GCCATATCGCTGCCCTTTCATGTGTACTCGGCCTCCTTGGATCTATGA
                      ____________________________________________________________
consensus                         GCCATATCGCTGCCCTTTCATGTGTACTCGGCCTCCTTGGATCTATGA
 
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rJMFF041G16+          CATCTTCGACAATGGTAAAGAGAAGATTTGTATGGGTGTATGCATCAGTCCAGTTTGCAT
JMFS039B11+                                     TTTGTATGGGTGTATGCATCAGTCCAGTTTGCAT
                      ____________________________________________________________
consensus             CATCTTCGACAATGGTAAAGAGAAGATTTGTATGGGTGTATGCATCAGTCCAGTTTGCAT
 
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rJMFF041G16+          TTGTGGTGCTCTTTGCACATATTTTCTACTCTCTGGTTCATGTGCAAGCAGTTCTGTCGA
JMFS039B11+           TTGTGGTGCTCTTTGCACATATTTTCTACTCTCTGGTTCATGTGCAAGCAGTTCTGTCGA
                      ____________________________________________________________
consensus             TTGTGGTGCTCTTTGCACATATTTTCTACTCTCTGGTTCATGTGCAAGCAGTTCTGTCGA
 
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rJMFF041G16+          TTCTTCTCTCCACATTTGCGGGGTTTGGTGTTGCAATGAGTGGAAGTTCCATTCTTGTCG
JMFS039B11+           TTCTTCTCTCCACATTTGCGGGGTTTGGTGTTGCAATGAGTGGAAGTTCCATTCTTGTCG
JMFS031B03+                                                                    TCG
                      ____________________________________________________________
consensus             TTCTTCTCTCCACATTTGCGGGGTTTGGTGTTGCAATGAGTGGAAGTTCCATTCTTGTCG
 
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rJMFF041G16+          AGTACTTCAGATGGCGAAGAAGGCGGCGCGTTTTGTTACACCGCCAAGAGAATCCTCAAG
JMFS039B11+           AGTACTTCAGATGGCGAAGAAGGCGGCGCGTTTTGTTACACCGCCAAGAGAATCCTCAAG
JMFS031B03+           AGTACTTCAGATGGCGAAGAAGGCGGCGCGTTTTGTTACACCGCCAAGAGAATCCTCAAG
                      ____________________________________________________________
consensus             AGTACTTCAGATGGCGAAGAAGGCGGCGCGTTTTGTTACACCGCCAAGAGAATCCTCAAG
 
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rJMFF041G16+          TCGCGCTACCTCCAGGGCGGTGGCCGCCACAGCCAAACCAAACAGTAACAGCAACAGCAA
rJMFF047I17+                                                       TAACAGCAACAGCAA
JMFS039B11+           TCGCGCTACCTCCAGGGCGGTGGCCGCCACAGCCAAACCAAACAGTAACAGCAACAGCAA
JMFS031B03+           TCGCGCTACCTCCAGGGCGGTGGCCGCCACAGCCAAACCAAACAGTAACAGCAACAGCAA
                      ____________________________________________________________
consensus             TCGCGCTACCTCCAGGGCGGTGGCCGCCACAGCCAAACCAAACAGTAACAGCAACAGCAA
 
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rJMFF041G16+          CAACAACATCGCAGGTCGGTCCTCAACATCATCAGACCGACATAGAAAATCCAGAAACAT
rJMFF047I17+          CAACAACATCGCAGGTCGGTCCTCAACATCATCAGACCGACATAGAAAATCCAGAAACAT
JMFS039B11+           CAACAACATCGCAGGTCGGTCCTCAACATCATCAGACCGACATAGAAAATCCAGAAACAT
JMFS031B03+           CAACAACATCGCAGGTCGGTCCTCAACATCATCAGACCGACATAGAAAATCCAGAAACAT
                      ____________________________________________________________
consensus             CAACAACATCGCAGGTCGGTCCTCAACATCATCAGACCGACATAGAAAATCCAGAAACAT
 
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rJMFF041G16+          TTAGTGGGAGCTAGTTGAAGTTGAAGCATTAGGATGGGAAGGTGTGATGTAGCAAAGATA
rJMFF047I17+          TTAGTGGGAGCTAGTTGAAGTTGAAGCATTAGGATGGGAAGGTGTGATGTAGCAAAGATA
JMFS039B11+           TTAGTGGGAGCTAGTTGAAGTTGAAGCATTAGGATGGGAAGGTGTGATGTAGCAAAGATA
JMFS031B03+           TTAGTGGGAGCTAGTTGAAGTTGAAGCATTAGGATGGGAAGGTGTGATGTAGCAAAGATA
                      ____________________________________________________________
consensus             TTAGTGGGAGCTAGTTGAAGTTGAAGCATTAGGATGGGAAGGTGTGATGTAGCAAAGATA
 
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rJMFF041G16+          GAGAGTAATATGGAAAAATACAACAAGGGGTTTTGTTCATTGCTCCACCTTAGCTTGTAC
rJMFF047I17+          GAGAGTAATATGGAAAAATACAGCAAGGGGTTTTGTTCATTGCTCCACCTTAGCTTGTAC
JMFS039B11+           GAGAGTAATATGGAAAAATACAACAAGGGGTTTTGTTCATTGCTCCACCTTAGCTTGTAC
JMFS031B03+           GAGAGTAATATGGAAAAATACAACAAGGGGTTTTGTTCATTGCTCCACCTTAGCTTGTAC
                      ____________________________________________________________
consensus             GAGAGTAATATGGAAAAATACAACAAGGGGTTTTGTTCATTGCTCCACCTTAGCTTGTAC
 
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rJMFF041G16+          ATTGTTCCTTCTGCATAATTGTAATATTGCAGTGTTGTGAAAAAGAAAGTTTGAGTGATG
rJMFF047I17+          ATTGTTCCTTCTGCATAATTGTAATATTGCAGTGTTGTGAAAAAGAAAGTTTGAGTGATG
JMFS039B11+           ATTGTTCCTTCTGCATAATTGTAATATTGCAGTGTTGTGAAAAAGAAAGTTTGAGTGATG
JMFS031B03+           ATTGTTCCTTCTGCATAATTGTAATATTGCAGTGTTGTGAAAAAGAAAGTTTGAGTGATG
                      ____________________________________________________________
consensus             ATTGTTCCTTCTGCATAATTGTAATATTGCAGTGTTGTGAAAAAGAAAGTTTGAGTGATG
 
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rJMFF041G16+          AGTATACATACATTATACAT                                        
rJMFF047I17+          AGTATACATACATTATACAT                                        
JMFS039B11+           AGTATACATACATTATACAT                                        
JMFS031B03+           AGTATACATACATTATACATXXXXXXXXXXXXXXXXXXXXXXCCCGAGACTAGTTCTCTC
                      ____________________________________________________________
consensus             AGTATACATACATTATACATNNNNNNNNNNNNNNNNNNNNNNCCCGAGACTAGTTCTCTC