Contig 013088:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002A20Sequence519013088 (9)ref|XP_004239847.1|182PREDICTED: protein transport protein SEC23-like [Solanum lycopersicum]
JMFS021H11Sequence621013088 (9)ref|XP_006365462.1|220PREDICTED: protein transport protein SEC23-like [Solanum tuberosum]
JMFS032A04Sequence561013088 (9)ref|XP_006365462.1|219PREDICTED: protein transport protein SEC23-like [Solanum tuberosum]
JMFS106C06Sequence603013088 (9)ref|XP_004239847.1|218PREDICTED: protein transport protein SEC23-like [Solanum lycopersicum]
JMFS109D08Sequence615013088 (9)ref|XP_009622558.1|221PREDICTED: protein transport protein SEC23-like [Nicotiana tomentosiformis]
JMFS111G03Sequence611013088 (9)ref|XP_009622558.1|315PREDICTED: protein transport protein SEC23-like [Nicotiana tomentosiformis]
JMFS119E04Sequence611013088 (9)ref|XP_006365462.1|220PREDICTED: protein transport protein SEC23-like [Solanum tuberosum]
JMFS144F11Sequence626013088 (9)ref|XP_006365462.1|226PREDICTED: protein transport protein SEC23-like [Solanum tuberosum]
JMFS151G07Sequence626013088 (9)ref|XP_004239847.1|260PREDICTED: protein transport protein SEC23-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS111G03+ CGGAAAACCCAAGCTCGTG
                      ____________________________________________________________
consensus CGGAAAACCCAAGCTCGTG
 
. : . : . : . : . : . :
JMFS111G03+ CACCTGCACCTGAGTTCCGAAGGAGATAAACCCAACCATGGCATTCTCCGGGAGCATTCC
                      ____________________________________________________________
consensus CACCTGCACCTGAGTTCCGAAGGAGATAAACCCAACCATGGCATTCTCCGGGAGCATTCC
 
. : . : . : . : . : . :
JMFS111G03+ GATAGCCCGTTTCAATGCGGATTTCGCGAAACCCAGCTCCTCCTCGAGCATGCACGTATC
JMFS151G07+ CCGTTTCAATGCGGATTTCGCGAAACCCAGCTCCTCCTCGAGCATGCACGTATC
                      ____________________________________________________________
consensus GATAGCCCGTTTCAATGCGGATTTCGCGAAACCCAGCTCCTCCTCGAGCATGCACGTATC
 
. : . : . : . : . : . :
JMFS111G03+ GAGGACGAACAAGTAAACCGGAGGCGGGCCGGCAGCGGAATTGGGGCCGATGTTAGGGTT
JMFS151G07+ GAGGACGAACAAGTAAACCGGAGGCGGGCCGGCAGCGGAATTGGGGCCGATGTTAGGGTT
JMFS109D08+ AAGTAAACCGGAGGCGGGCCGGCAGCGGAATTGGGGCCGATGTTAGGGTT
JMFS119E04+ CGGGCCGGCAGCGGAATTGGGGCCGATGTTAGGGTT
JMFS106C06+ CGATGTTAGGGTT
JMFS021H11+ ATTGGGGCCGATGTAGGGTTT
                      ____________________________________________________________
consensus GAGGACGAACAAGTAAACCGGAGGCGGGCCGGCAGCGGAATTGGGGCCGATGTTAGGGTT
 
. : . : . : . : . : . :
JMFS111G03+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS151G07+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS109D08+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS144F11+ ATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS032A04+ GGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS119E04+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFS106C06+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
JMFF002A20+ T
JMFS021H11+ ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
                      ____________________________________________________________
consensus ATGAGGGAGAGTGTATTGTATGGTGGTGAATTGGGGGTAGAGCTCGGCCGGGACGTTGGT
 
. : . : . : . : . : . :
JMFS111G03+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS151G07+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS109D08+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS144F11+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS032A04+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS119E04+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS106C06+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGNTGCGCTGGAAGCAAAAGGGGCAGAT
JMFF002A20+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
JMFS021H11+ CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
                      ____________________________________________________________
consensus CTCGGAGACGGCGGAGTACTGGTGGGGGAAACTGTTGCGCTGGAAGCAAAAGGGGCAGAT
 
. : . : . : . : . : . :
JMFS111G03+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS151G07+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS109D08+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS144F11+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS032A04+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS119E04+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS106C06+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFF002A20+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
JMFS021H11+ CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
                      ____________________________________________________________
consensus CCATATCAGCGCCTGGTAATCGACCCGCGCGAAGGGGTTGAGCACGGCGGTGCAGGTCTT
 
. : . : . : . : . : . :
JMFS111G03+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS151G07+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS109D08+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS144F11+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS032A04+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS119E04+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS106C06+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFF002A20+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
JMFS021H11+ GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
                      ____________________________________________________________
consensus GCAGCGCAGCGGCGCGTACGGAACCGTGACGAGCTCCGGCTGGGGACGGATCAGGTGGAT
 
. : . : . : . : . : . :
JMFS111G03+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS151G07+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS109D08+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS144F11+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS032A04+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS119E04+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS106C06+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFF002A20+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
JMFS021H11+ CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
                      ____________________________________________________________
consensus CGAGGCCGCGATTGGGATCACGCACTTGCTGGACTCCACCTTGGTACGCGGCCACGCATT
 
. : . : . : . : . : . :
JMFS111G03+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS151G07+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS109D08+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS144F11+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS032A04+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS119E04+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS106C06+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFF002A20+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
JMFS021H11+ CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
                      ____________________________________________________________
consensus CCACGTCATGCGGACGCCGTCGATACCCTCCGTATCCGTCTGAGAGATCTCGCTGGACGC
 
. : . : . : . : . : . :
JMFS111G03+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAA
JMFS151G07+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS109D08+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS144F11+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS032A04+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS119E04+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS106C06+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFF002A20+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
JMFS021H11+ CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
                      ____________________________________________________________
consensus CATTAACGATGATCTCGCTATATAATATAAATAAATACAAACAAACACAAAACTATATAA
 
. : . : . : . : . : . :
JMFS151G07+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS109D08+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS144F11+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS032A04+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS119E04+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS106C06+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFF002A20+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
JMFS021H11+ ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
                      ____________________________________________________________
consensus ACAAAATTTTTTTGGTTTTTAATTTAGGACAAAATACAAGAAAATTGGGCGACCCCAATG
 
. : . : . : . : . : . :
JMFS151G07+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGG
JMFS109D08+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFS144F11+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFS032A04+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFS119E04+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFS106C06+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFF002A20+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
JMFS021H11+ GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
                      ____________________________________________________________
consensus GTAATGGCGGGTGATGGGTAGAGGCCAAAGGGGTCACACGGCGGAAGAAGCGACTAAGAA
 
. : . : . : . : . : . :
JMFS109D08+ AGAAGGGAAAACAAAGAGAGAGAAA
JMFS144F11+ AGAAGGGAAAACAAAGAGAGAGAAA
JMFS032A04+ AGAAGGGAAAACAAAGAGAGAGAAA
JMFS119E04+ AGAAGGGAAAACAAAGAGAGAGAAATTGGGAGGGA
JMFS106C06+ AGAAGGGAAAACAAAGAGAGAGAAATTGGGAGGGAGATAGAGGAATGTGA
JMFF002A20+ AGAAGGGAAAACAAAGAGAGAGAAATTGGGAGGGA
JMFS021H11+ AGAAGGGAAAACAAAGAGAGAGAAATTGGGAGGGAGATAGAGGAATGTGAGAAGGGTAGG
                      ____________________________________________________________
consensus AGAAGGGAAAACAAAGAGAGAGAAATTGGGAGGGAGATAGAGGAATGTGAGAAGGGTAGG