Contig 013034:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047E11Sequence526013034 (5)emb|CDO98937.1|9e-61unnamed protein product [Coffea canephora]368013034 (5)ref|XP_011102072.1|9e-11PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like
JMFN011A09Sequence532013034 (5)emb|CDO98937.1|6e-61unnamed protein product [Coffea canephora]
JMFN018P08Sequence531013034 (5)emb|CDO98937.1|4e-61unnamed protein product [Coffea canephora]
JMFN025O20Sequence529013034 (5)emb|CDO98937.1|4e-61unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF047E11- ACCCTGGAGAGTTTTTTTTTTTTTTTCXXXXXXXXXXXXXXXX
                      ____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTCNNNNNNNNNNNNNNNN
 
. : . : . : . : . : . :
rJMFF047E11- XXXXGATGAAAATATCTGGTCATATTATACTCAAAACAAGTGAACATTTTTATGCTGCAA
JMFF047E11+ GCAA
JMFN011A09+ GCAA
                      ____________________________________________________________
consensus NNNNGATGAAAATATCTGGTCATATTATACTCAAAACAAGTGAACATTTTTATGCTGCAA
 
. : . : . : . : . : . :
rJMFF047E11- AGGCAGGTTCAATGGAAGGAATTTTACCAGGATCAATGTCTTACATATGCAATACAAAGA
JMFF047E11+ AGGCAGGTTCAATGGAAGGAATTTACCCAGGATCAATGTCTTACATATGCAATACAAAGA
JMFN011A09+ AGGCAGGTTCAATGGAAGGAATTTTACCAGGATCAATGTCTTACATATGCAATACAAAGA
JMFN025O20+ CAATGGAAGGAATTTTACCAGGATCAATGTCTTACATATGCAATACAAAGA
JMFN018P08+ CAATGGAAGGAATTTTACCAGGATCAATGTCTTACATATGCAATACAAAGA
                      ____________________________________________________________
consensus AGGCAGGTTCAATGGAAGGAATTTTACCAGGATCAATGTCTTACATATGCAATACAAAGA
 
. : . : . : . : . : . :
rJMFF047E11- TATAAAATCACTTGAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
JMFF047E11+ TATAAAATCACTGNAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
JMFN011A09+ TATAAAATCACTTGAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
JMFN025O20+ TATAAAATCACTTGAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
JMFN018P08+ TATAAAATCACTTGAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
                      ____________________________________________________________
consensus TATAAAATCACTTGAAATGTGTTTAATCAAGATGCATCGACTTGTTACAAACTTGTCGAG
 
. : . : . : . : . : . :
rJMFF047E11- ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
JMFF047E11+ ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
JMFN011A09+ ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
JMFN025O20+ ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
JMFN018P08+ ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
                      ____________________________________________________________
consensus ATTATTGTGATCATATGATTAGGAAGATTATTTGCCATGAAATCAGAAAGAACATGTCTT
 
. : . : . : . : . : . :
rJMFF047E11- TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
JMFF047E11+ TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
JMFN011A09+ TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
JMFN025O20+ TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
JMFN018P08+ TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
                      ____________________________________________________________
consensus TTCAAATTCCTTTTGCTCTTTGCGGCAAAACTCAAATTCATTTGTGTGGTAGTGCATGCA
 
. : . : . : . : . : . :
rJMFF047E11- CCCTGCATAAGCATCCATTTCTTTG
JMFF047E11+ CCCTGCATAAGCATCCATTTCTTTGGTGCACCTTTGATGAAGATCTTTGAGCAGGCCGAG
JMFN011A09+ CCCTGCATAAGCATCCATTTCTTTGGTGCACCTTTGATGAAGATCTTTGAGCAGGCCGAG
JMFN025O20+ CCCTGCATAAGCATCCATTTCTTTGGTGCACCTTTGATGAAGATCTTTGAGCAGGCCGAG
JMFN018P08+ CCCTGCATAAGCATCCATTTCTTTGGTGCACCTTTGATGAAGATCTTTGAGCAGGCCGAG
                      ____________________________________________________________
consensus CCCTGCATAAGCATCCATTTCTTTGGTGCACCTTTGATGAAGATCTTTGAGCAGGCCGAG
 
. : . : . : . : . : . :
JMFF047E11+ AACACAACGTGTAACTTGGTGGCCTTTGTCGAGGCATTTCTCGGGGTTAGGATCGTCTTT
JMFN011A09+ AACACAACGTGTAACTTGGTGGCCTTTGTCGAGGCATTTCTCGGGGTTAGGATCGTCTTT
JMFN025O20+ AACACAACGTGTAACTTGGTGGCCTTTGTCGAGGCATTTCTCGGGGTTAGGATCGTCTTT
JMFN018P08+ AACACAACGTGTAACTTGGTGGCCTTTGTCGAGGCATTTCTCGGGGTTAGGATCGTCTTT
                      ____________________________________________________________
consensus AACACAACGTGTAACTTGGTGGCCTTTGTCGAGGCATTTCTCGGGGTTAGGATCGTCTTT
 
. : . : . : . : . : . :
JMFF047E11+ CTTACACTTGAGGAACGCCACATTCTCGCCCCGGCACCGAGTTTCGATGTGTTTCGACGC
JMFN011A09+ CTTACACTTGAGGAACGCCACATTCTCGCTCCGGCACCGAGTTTCGATGTGTTTCGACGC
JMFN025O20+ CTTACACTTGAGGAACGCCACATTCTCGCTCCGGCACCGAGTTTCGATGTGTTTCGACGC
JMFN018P08+ CTTACACTTGAGGAACGCCACATTCTCGCTCCGGCACCGAGTTTCGATGTGTTTCGACGC
                      ____________________________________________________________
consensus CTTACACTTGAGGAACGCCACATTCTCGCTCCGGCACCGAGTTTCGATGTGTTTCGACGC
 
. : . : . : . : . : . :
JMFF047E11+ CGCCATCAGCACCGACGATGTAGGGATCGGAATTCCTCCGGCATCCACCGTGCTCGCCAT
JMFN011A09+ CGCCATCAGCACCGACGATGTAGGGATCGGAATTCCTCCGGCATCCACCGTGCTCGCCAT
JMFN025O20+ CGCCATCAGCACCGACGATGTAGGGATCGGAATTCCTCCGGCATCCACCGTGCTCGCCAT
JMFN018P08+ CGCCATCAGCACCGACGATGTAGGGATCGGAATTCCTCCGGCATCCACCGTGCTCGCCAT
                      ____________________________________________________________
consensus CGCCATCAGCACCGACGATGTAGGGATCGGAATTCCTCCGGCATCCACCGTGCTCGCCAT
 
. : . : . : . : . : . :
JMFF047E11+ TCTCCAATCGCCCTCTTCTCCTCTTTCTCTGCAATCGAAACC
JMFN011A09+ TCTCCAATCGCCCTCTTCTCCTCTTTCTCTGCAATCGAAACC
JMFN025O20+ TCTCCAATCGCCCTCTTCTCCTCTTTCTCTGCAATCGAAACCGCTTAGAACAATCACT
JMFN018P08+ TCTCCAATCGCCCTCTTCTCCTCTTTCTCTGCAATCGAAACCGCTTAGAACAATCACTGC
                      ____________________________________________________________
consensus TCTCCAATCGCCCTCTTCTCCTCTTTCTCTGCAATCGAAACCGCTTAGAACAATCACTGC