Contig 013031:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036A08Sequence470013031 (5)gb|KJB40530.1|4e-87hypothetical protein B456_007G068200 [Gossypium raimondii]688013031 (5)ref|XP_009624308.1|2e-124PREDICTED: proteasome subunit alpha type-4 [Nicotiana tomentosiformis] ref|XP_00
JMFF036O07Sequence558013031 (5)ref|XP_006429795.1|3e-112hypothetical protein CICLE_v10013771mg [Citrus clementina] gb|ESR43035.1| hypoth706013031 (5)ref|XP_009624308.1|2e-118PREDICTED: proteasome subunit alpha type-4 [Nicotiana tomentosiformis] ref|XP_00
JMFN017K13Sequence605013031 (5)ref|XP_006429795.1|9e-123hypothetical protein CICLE_v10013771mg [Citrus clementina] gb|ESR43035.1| hypoth

Alignment

This contig is upended


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rJMFF036O07- ATGA
                      ____________________________________________________________
consensus ATGA
 
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rJMFF036O07- CCAAACAAGTTCCCAAACATAATTGAACAGTAAGTACCTAATTAACCATTGAACAATCCA
rJMFF036A08- CCA
                      ____________________________________________________________
consensus CCAAACAAGTTCCCAAACATAATTGAACAGTAAGTACCTAATTAACCATTGAACAATCCA
 
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rJMFF036O07- TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
rJMFF036A08- TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
                      ____________________________________________________________
consensus TAGTTTAAAAAGAAGTACAAGCATGGTCTGAGAAGAGAGTTAAAATCATATGAAGTGGTT
 
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rJMFF036O07- TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
rJMFF036A08- TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
                      ____________________________________________________________
consensus TTAGGTCTCCACGGTGGGTTGGGTCAACCCAAGCTTCGCAAGCAATTTATTCAGGGACTC
 
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rJMFF036O07- TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
rJMFF036A08- TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
                      ____________________________________________________________
consensus TGGTGAGTGCACTAGGTACTTAACATCTCCATTAGAGAGGAATACCTCGGCCAATTCGAG
 
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rJMFF036O07- CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
rJMFF036A08- CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
                      ____________________________________________________________
consensus CTTCTCTGAAGTAAGACTTGTGCTATCCATTGTCTTGCTAAGCACCTTGAGAGCGAGCTG
 
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rJMFF036O07- AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
rJMFF036A08- AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
JMFN017K13+ GCCGC
                      ____________________________________________________________
consensus AACAGCCTCCTCCCTCGTGATCTCATCCTTGTAGTCCTGCTTTAGCATTGATTGTGCCGC
 
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rJMFF036O07- TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
rJMFF036A08- TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
JMFF036O07+ CCTCCATAGTTTCCGCTTGGGTCACT
JMFN017K13+ TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
                      ____________________________________________________________
consensus TTGATTGTTTGCTCCAATTGCTGCAGCCTTCCATCCTCCATAGTTTCCGCTTGGGTCACT
 
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rJMFF036O07- CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
rJMFF036A08- CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
JMFF036O07+ CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
JMFN017K13+ CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
                      ____________________________________________________________
consensus CATGTAGAGCTGGAAGCCATAGTTCTTATCCCATCCTGCAAAGAGAAAAGAAACTCCGAA
 
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rJMFF036O07- TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
rJMFF036A08- TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFF036O07+ TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFF036A08+ GACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
JMFN017K13+ TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
                      ____________________________________________________________
consensus TGGACGGAGACCACCAAACTGCGTGTAGCCTTGTTTAGTGTCACATAGAGACTGAACGAG
 
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rJMFF036O07- CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
rJMFF036A08- CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFF036O07+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFF036A08+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
JMFN017K13+ CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
                      ____________________________________________________________
consensus CTGTTCGACAGGCATTGGTTCTTGGTAAGCATAAGTATATCGTTGAGCCTGGACCCTAGC
 
. : . : . : . : . : . :
rJMFF036O07- AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
rJMFF036A08- AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFF036O07+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFF036A08+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
JMFN017K13+ AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
                      ____________________________________________________________
consensus AGTGTTAATAAGAATGTTGGCATCAGACATTATTCCCGCGACAGCACATGCCACATGGTC
 
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rJMFF036O07- ATCAATCTTGTACATCTTCTCTGTANATGTTGATGTCTGAAG
rJMFF036A08- ATCAATCTTGTACATCTTCTCTGTANATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFF036O07+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFF036A08+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
JMFN017K13+ ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
                      ____________________________________________________________
consensus ATCAATCTTGTACATCTTCTCTGTAGATGTTGATGTCTGAAGAAGCTTGGAAGTGACCTT
 
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rJMFF036A08- CTTTTC
JMFF036O07+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
JMFF036A08+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
JMFN017K13+ CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
                      ____________________________________________________________
consensus CTTTTCACCAACCAACACAACTCCATCTTTAGATAATATGCCTATGGCACTGCCAGCATT
 
. : . : . : . : . : . :
JMFF036O07+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
JMFF036A08+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
JMFN017K13+ TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
                      ____________________________________________________________
consensus TCCAATTGCCTCCATTGCATACTCAACCTGGTACAGACGACCTTCGGGAGAGAAGATAGT
 
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JMFF036O07+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
JMFF036A08+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
JMFN017K13+ TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
                      ____________________________________________________________
consensus TGTACGGCTATCATACCTTCGCGACATTGTGAATTCTGATGAGTTGCAGAGCACTGGATT
 
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JMFF036O07+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGT
JMFF036A08+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGT
JMFN017K13+ TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGTATTTCTTC
                      ____________________________________________________________
consensus TTCAGAATTGAGTGAGTCGACTCTGAGCTTAGCCTCCTTCTAATCCCTATGTATTTCTTC