Contig 013030:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN015L20Sequence594013030 (6)gb|KJB54618.1|2e-79hypothetical protein B456_009G041700 [Gossypium raimondii]
JMFN038I19Sequence621013030 (6)ref|XP_003633111.1|6e-82PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera] emb|CBI2
JMSF010O19Sequence228013030 (6)gb|KCW81786.1|2e-20hypothetical protein EUGRSUZ_C031461, partial [Eucalyptus grandis]
JMSF044B02Sequence764013030 (6)ref|XP_002516111.1|2e-105DNA binding protein, putative [Ricinus communis] gb|EEF46113.1| DNA binding prot835015149ref|XP_009619795.1|261PREDICTED: PHD finger protein ALFIN-LIKE 4-like, partial [Nicotiana tomentosifo
JMSF045H19Sequence795013030 (6)ref|XP_002516111.1|8e-97DNA binding protein, putative [Ricinus communis] gb|EEF46113.1| DNA binding prot691013030 (6)ref|XP_011078057.1|249PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045H19- ATTATCCTGATAAACAAGAGTTATGGGC
                      ____________________________________________________________
consensus ATTATCCTGATAAACAAGAGTTATGGGC
 
. : . : . : . : . : . :
rJMSF045H19- CGAAACTTCAATACACATGCCTAGCAGTTATGGGGGATGGCAGATGAGATGTTTAGGTGA
                      ____________________________________________________________
consensus CGAAACTTCAATACACATGCCTAGCAGTTATGGGGGATGGCAGATGAGATGTTTAGGTGA
 
. : . : . : . : . : . :
rJMSF045H19- GCCGAAATAAGACAATTACAGTTAAGTGAAGCGTAGCACTTGTAGGGAATATCAAGGCCG
                      ____________________________________________________________
consensus GCCGAAATAAGACAATTACAGTTAAGTGAAGCGTAGCACTTGTAGGGAATATCAAGGCCG
 
. : . : . : . : . : . :
rJMSF045H19- TGGCCTCTTGTTGCTGCATGATGGGCATTTGTACTGCTTTATGTGTTCAGCCC-GGGCAG
JMSF045H19+ TGCATGATGGGCATTTGTACTGCTTTATGTGTTCAGCCCGGGGCAG
                      ____________________________________________________________
consensus TGGCCTCTTGTTGCTGCATGATGGGCATTTGTACTGCTTTATGTGTTCAGCCCGGGGCAG
 
. : . : . : . : . : . :
rJMSF045H19- GGGTGATCTTCACACACTTG-CCATGGAACCACCTCTCACATATGTCGCAGCAAATCCAG
JMSF045H19+ GGGTGATCTTCACACACTTGNCCATGGAACCACCTCTCACATATGTCGCAGCAAATCCAG
JMSF044B02+ CCATGGAACCACCTCTCACATATGTCGCAGCAAATCCAG
                      ____________________________________________________________
consensus GGGTGATCTTCACACACTTGNCCATGGAACCACCTCTCACATATGTCGCAGCAAATCCAG
 
. : . : . : . : . : . :
rJMSF045H19- AATTCATCTGACGCGTAGTTCTCACCACAAGCTCCACACAAGGTATCACCGTGCTCGTCT
JMSF045H19+ AATTCATCTGACGCGTAGTTCTCACCACAAGCTCCACACAAGGTATCACCGTGCTCGTCT
JMSF044B02+ AATTCATNTGACGCGTAGTTCTCACCACAAGCTCCACACAAGGTATCACCGTGCTCGTCT
JMFN038I19+ CAAGGTATCACCGTGCTCGTC-
                      ____________________________________________________________
consensus AATTCATCTGACGCGTAGTTCTCACCACAAGCTCCACACAAGGTATCACCGTGCTCGTCT
 
. : . : . : . : . : . :
rJMSF045H19- TCTTCTTCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTTTGAGTACTTAACCGGT
JMSF045H19+ TCTTCTTCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTTTGAGTACTTAACCGGT
JMSF044B02+ TCTTCTTCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTTTGAGTACTTAACCGGT
JMFN038I19+ TCTTCTTCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTNTGAGTACTTAACCGGT
JMFN015L20+ TCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTTTGAGTACTTAACCGGT
                      ____________________________________________________________
consensus TCTTCTTCATCAAATCCATCCTCCTCATCCTTTGCTTGGACTTTTGAGTACTTAACCGGT
 
. : . : . : . : . : . :
rJMSF045H19- TTAGGATTTGACTTGGACTTGTTGTTGCTGCTATTATTTGTGACAGATGACTTTTCCTTT
JMSF045H19+ TTAGGATTTGACTTGGACTTGTTGTTGCTGCTATTATTTGTGACAGATGACTTTTCCTTT
JMSF044B02+ TTAGGATTTGACTTGGACTTGTTGTTGCCGCTATTATTTGTGACAGATGACTTTTCCTTT
JMFN038I19+ TTAGGATTTGACTTGGACTTGTTGTTGCTGCTATTATTTGTGACAGATGACTTTTCCTTT
JMFN015L20+ TTAGGATTTGACTTGGACTTGTTGTTGCTGCTATTATTTGTGACAGATGACTTTTCCTTT
                      ____________________________________________________________
consensus TTAGGATTTGACTTGGACTTGTTGTTGCTGCTATTATTTGTGACAGATGACTTTTCCTTT
 
. : . : . : . : . : . :
rJMSF045H19- ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
JMSF045H19+ ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
JMSF044B02+ ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
JMFN038I19+ ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
JMFN015L20+ ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
                      ____________________________________________________________
consensus ACTTGTTTTTTAGCAGCTCCAGTCACAACTTCAAAGATTGTAGGAAGATCATTTATCATA
 
. : . : . : . : . : . :
rJMSF045H19- TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
JMSF045H19+ TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
JMSF044B02+ TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
JMFN038I19+ TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
JMFN015L20+ TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
                      ____________________________________________________________
consensus TTGAAGAGGCGCTTCCTGTCAGCTTTGTCAAAACCAAATCTTGCACCAAAATAGAAGGCA
 
. : . : . : . : . : . :
rJMSF045H19- ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
JMSF045H19+ ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
JMSF044B02+ ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
JMFN038I19+ ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
JMFN015L20+ ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
                      ____________________________________________________________
consensus ACTGAAAGTAGCCATGCATCGCTATGAACAGCAACGAGAGCCAACCAGTCCTTTTCTTGC
 
. : . : . : . : . : . :
rJMSF045H19- ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGACCTCT
JMSF045H19+ ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGACCTCT
JMSF044B02+ ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGAACTCT
JMFN038I19+ ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGACCTCT
JMFN015L20+ ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGACCTCT
                      ____________________________________________________________
consensus ATCCCATCTCTGGCAAAGTTGATACCTAATGCTGGTTCTGGAAGTTCAGGTGGGACCTCT
 
. : . : . : . : . : . :
rJMSF045H19- TCAGC
JMSF045H19+ TCAGCAGGTAAATTAACTTCCCACAGCTCACTTGGAAATCCATAGAGACAAAGATTCTCC
JMSF044B02+ TCAGCAGGTAAATTAACTTCCCACAGCTCACTTGGAAATCCATAGAGACAAAGATTCTCC
JMFN038I19+ TCAGCAGGTAAATTAACTTCCCACAGCTCACTTGGAAATCCATAGAGACAAAGATTCTCC
JMFN015L20+ TCAGCAGGTAAATTAACTTCCCACAGCTCACTTGGAAATCCATAGAGACAAAGATTCTCC
                      ____________________________________________________________
consensus TCAGCAGGTAAATTAACTTCCCACAGCTCACTTGGAAATCCATAGAGACAAAGATTCTCC
 
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JMSF010O19+ CCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
JMSF045H19+ TTCTCCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
JMSF044B02+ TTCTCCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
JMFN038I19+ TTCTCCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
JMFN015L20+ TTCTCCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
                      ____________________________________________________________
consensus TTCTCCGGGTCACACTGCTGATAAAAATCCTCGACATCCGTAGTAAGGGCCTTGATCATT
 
. : . : . : . : . : . :
JMSF010O19+ CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
JMSF045H19+ CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
JMSF044B02+ CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
JMFN038I19+ CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
JMFN015L20+ CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
                      ____________________________________________________________
consensus CCAGCACGGCGGCCCTTGTAATCCCTAAAGACCTCCTCTACCGTCCGAGGATTGTGCTGT
 
. : . : . : . : . : . :
JMSF010O19+ GCGCCTCCGTCCATT
JMSF045H19+ GCGCCTCCGTCCATT
JMSF044B02+ GCGCCTCCGTCCATT
JMFN038I19+ GCGCCTCCGTCCATTGCCTTTCTTCCTCGGCTTCTCTCAACAACACACTCGGAAAACAAA
JMFN015L20+ GCGCCTCCGTCCATTGCCTTTCTTCCTCGGCTTCTCTCAACAACACACTCGGAAAACAAA
                      ____________________________________________________________
consensus GCGCCTCCGTCCATTGCCTTTCTTCCTCGGCTTCTCTCAACAACACACTCGGAAAACAAA