Contig 013024:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008L02Sequence694013024 (6)ref|XP_009119727.1|8e-47PREDICTED: acyl-coenzyme A thioesterase 8 isoform X2 [Brassica rapa]
JMFF013H24Sequence326004511 (2)703013024 (6)ref|XP_009119726.1|2e-60PREDICTED: acyl-coenzyme A thioesterase 8 isoform X1 [Brassica rapa]
JMFF030I22Sequence350004511 (2)513013024 (6)ref|XP_010479876.1|1e-24PREDICTED: acyl-coenzyme A thioesterase 8-like [Camelina sativa]
JMFF040M10Sequence564010841 (4)ref|XP_009605511.1|2e-82PREDICTED: acyl-coenzyme A thioesterase 8-like isoform X2 [Nicotiana tomentosif765013024 (6)ref|XP_009119726.1|5e-74PREDICTED: acyl-coenzyme A thioesterase 8 isoform X1 [Brassica rapa]
JMFN013D01Sequence617013024 (6)ref|XP_010479876.1|3e-26PREDICTED: acyl-coenzyme A thioesterase 8-like [Camelina sativa]
JMSF039P03Sequence679010841 (4)emb|CDP08822.1|4e-107unnamed protein product [Coffea canephora]888013024 (6)gb|AIL29214.1|9e-93acyl-CoA thioesterase [Camellia oleifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039P03+ TTGCTTCATTTCAGAAAGAAGAAGAAGGATTTGATCAC
                      ____________________________________________________________
consensus TTGCTTCATTTCAGAAAGAAGAAGAAGGATTTGATCAC
 
. : . : . : . : . : . :
rJMSF039P03+ CAGGAAGCATTAAAGCCTAATGTGCCAGATCCAGAAACGCTTTTTATCCATGGAAGAGAT
                      ____________________________________________________________
consensus CAGGAAGCATTAAAGCCTAATGTGCCAGATCCAGAAACGCTTTTTATCCATGGAAGAGAT
 
. : . : . : . : . : . :
rJMSF039P03+ ACGCGAAAGACGTATGACCGATCCTCGTCTTCCCAGGACCTATAGGAACAAGGTAGCTAC
rJMFF040M10+ CTAC
                      ____________________________________________________________
consensus ACGCGAAAGACGTATGACCGATCCTCGTCTTCCCAGGACCTATAGGAACAAGGTAGCTAC
 
. : . : . : . : . : . :
rJMSF039P03+ TAAAAAATTTGTTCCATGGCCAATAGAGATTCGGTTCTGTGATCCTAATACTGCCACCAG
rJMFF013H24+ CCAG
rJMFF040M10+ TAAAAAATTTGTTCCATGGCCAATAGAGATTCGGTTCTGTGATCNTAATACTGCCACCAG
                      ____________________________________________________________
consensus TAAAAAATTTGTTCCATGGCCAATAGAGATTCGGTTCTGTGATCCTAATACTGCCACCAG
 
. : . : . : . : . : . :
rJMSF039P03+ CCAGACCAAGAGTCCTCCAAGTTTGAGATACTGGTTTAGAGCTAAGGGAAAACTTT-CTG
rJMFF013H24+ CCAGACCAAGAGTCCTCCAAGTTTGAGATACTGGTTTAGAGCTAAGGGAAAACTTT-CTG
rJMFF008L02+ CCAAGAGTCCTCCAAGTTNGAGATACTGGTTTAGAGCTAAGGGAAAACTTTNCTG
rJMFF040M10+ CCAGACCAAGAGTCCTCCAAGTTTGAGATACTGGTTTAGAGCTAAGGGAAAACTTT-CTG
                      ____________________________________________________________
consensus CCAGACCAAGAGTCCTCCAAGTTTGAGATACTGGTTTAGAGCTAAGGGAAAACTTT-CTG
 
. : . : . : . : . : . :
rJMSF039P03+ ATGATCAAGCTTTGCACAGGTGTGTTGTGGCGTTTGCATCAGATCTTATCTTTGCTAGTG
rJMFF013H24+ ATGATCAAGCTTTGCACAGGTGTGTTGTGGCGTTTGCATCAGATCTTATCTTTGCTAGTG
rJMFF008L02+ ATGATCAAGCTTTGCACAGGTGTGTTGTGGCGTTTGCATCGGATCTTATCTTTNCTAGTG
rJMFF040M10+ ATGATCAAGCTTTGCACAGGTGTGTTGTGGCGTTTGCATCGGATCTTATCTTTGCTAGTG
                      ____________________________________________________________
consensus ATGATCAAGCTTTGCACAGGTGTGTTGTGGCGTTTGCATCGGATCTTATCTTTGCTAGTG
 
. : . : . : . : . : . :
rJMSF039P03+ TAAGTACGAACCCTCATCGCAGGAAAGACCTGAAGACTGCTTCTGTTAGTCTAGATCACA
rJMFF030I22+ TTCTGTTAGTCTAGATCACA
rJMFF013H24+ TAAGTACGAACCCTCATCGCAGGAAAGACCTGAAGACTGCTTCTGTTAGTCTAGATCACA
rJMFF008L02+ TAAGTACGAACCCTCATCGCAGGAAAGACCTGAAGACTGCTTCTGTTAGTCTAGATCACA
rJMFF040M10+ TAAGTACGAACCCTCATCGCAGGAAAGACCTGAAGACTGCTTCTGTTAGTCTAGATCACA
JMFN013D01+ CTGTTAGTCTAGATCACA
                      ____________________________________________________________
consensus TAAGTACGAACCCTCATCGCAGGAAAGACCTGAAGACTGCTTCTGTTAGTCTAGATCACA
 
. : . : . : . : . : . :
rJMSF039P03+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
rJMFF030I22+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTNGTGATTAAGAGTC
rJMFF013H24+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
rJMFF008L02+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
rJMFF040M10+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
JMFN013D01+ CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
                      ____________________________________________________________
consensus CGATGTGGTTCCATAGACCTCTTCGGGCTGATGATTGGATATTGTTTGTGATTAAGAGTC
 
. : . : . : . : . : . :
rJMSF039P03+ CTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTTGACAGGAAAGGAACGC
rJMFF030I22+ NTTNTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTCGACAGGAAAGGAACGC
rJMFF013H24+ NTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTNGACAGGAAAGGAACGC
rJMFF008L02+ CTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTTGNCAGGAAAGGAACGC
rJMFF040M10+ CTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTTGACAGGAAAGGAACGC
JMFN013D01+ CTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTTGACAGGAAAGGAACGC
                      ____________________________________________________________
consensus CTTCTGCATACAATGTACGCGGTTTTGTTTCCGGGGAAATGTTTGACAGGAAAGGAACGC
 
. : . : . : . : . : . :
rJMSF039P03+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
rJMFF030I22+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
rJMFF013H24+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
rJMFF008L02+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGNGAGGCCCCATAAGCCCGTTG
rJMFF040M10+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
JMFN013D01+ TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
                      ____________________________________________________________
consensus TTGTGGTATCGCTTACTCAAGAGGCGTTACAGAGGATGGTGAGGCCCCATAAGCCCGTTG
 
. : . : . : . : . : . :
rJMSF039P03+ TCCAGTCCAAGCTGTAAAACTCGGTTTCAGCTACTATACAGCTGATGTACGCTGTGAGGA
rJMFF030I22+ TCCAGTCCAAGCNGTANANCTCGGTTTCAGCTACTATACAGNTGANGTACGCTGTGAGGA
rJMFF013H24+ TCCAGTCCAAGCTGTAAANCTCGGTTTCAGCTACTATACAGNTGANGTACGCTGTGAGGA
rJMFF008L02+ TCCAGTCCAAGCTGTAAAACTCGGTTTCAGCTACTATACAGCTGATGTACGCTGTGAGGA
rJMFF040M10+ TCCAGTCCAAGCTGTAAAACTCGGTTTCAGCTACTATACAGCTGATGTACGCTGTGAGGA
JMFN013D01+ TCCAGTCCAAGCTGTAAAACTCGGTTTCAGCTACTATACAGCTGATGTACGCTGTGAGGA
                      ____________________________________________________________
consensus TCCAGTCCAAGCTGTAAAACTCGGTTTCAGCTACTATACAGCTGATGTACGCTGTGAGGA
 
. : . : . : . : . : . :
rJMSF039P03+ GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTCGAAATATTGATCATCA
rJMFF030I22+ GAGTCGGGAANGAAATCTTTCACTTCTGGGAAATACGTATTCTCGAAATATTGATCATCA
rJMFF013H24+ GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTNGAAATATTGATCATCA
rJMFF008L02+ GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTNGAAATANTGATCATCA
rJMFF040M10+ GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTCGAAATATTGATCATCA
JMFN013D01+ GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTCGAAATATTGATCATCA
                      ____________________________________________________________
consensus GAGTCGGGAATGAAATCTTTCACTTCTGGGAAATACGTATTCTCGAAATATTGATCATCA
 
. : . : . : . : . : . :
rJMSF039P03+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
rJMFF030I22+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
rJMFF013H24+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
rJMFF008L02+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTNGATTTTATTTTACACTTCAACTT
rJMFF040M10+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
JMFN013D01+ CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
                      ____________________________________________________________
consensus CTCATCAAAGAAACGCGGTTAGTGCCACGGATTTCTTGATTTTATTTTACACTTCAACTT
 
. : . : . : . : . : . :
rJMSF039P03+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
rJMFF030I22+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTNTTCCTGGTTATATGGTTTTTT
rJMFF013H24+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
rJMFF008L02+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
rJMFF040M10+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
JMFN013D01+ CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
                      ____________________________________________________________
consensus CATCAACCAAGGCAAAGACATAATGCAGGAAATAAATTCTTCCTGGTTATATGGTTTTTT
 
. : . : . : . : . : . :
rJMSF039P03+ ATTCTACTTTTATACTGCGTTATAGTGTGGAC-TAGTTGCTTTGTACACTATGGAAAACA
rJMFF030I22+ ATTCTACTTNTATACTGCGTTATAGTGTGGCACTAGTTGCTTTGTACACTATGGAAAACA
rJMFF013H24+ ATTCTACTTTTATACTGCGTTATAGTGTGGACGTAGTTGCTTTGTACACTATGGAAAACA
rJMFF008L02+ ATTNTACNTTTATACTGCGTTATAGTGTGGAN-TAGTTGCTTTGTACACTATGGAAAACA
rJMFF040M10+ ATTCTACTTTTATACTGCGTTATAGTGTGGAC-TAGTTGCTTTGTACACTATGGAAAACA
JMFN013D01+ ATTCTACTTTTATACTGCGTTATAGTGTGGAC-TAGTTGCTTTGTACACTATGGAAAACA
                      ____________________________________________________________
consensus ATTCTACTTTTATACTGCGTTATAGTGTGGAC-TAGTTGCTTTGTACACTATGGAAAACA
 
. : . : . : . : . : . :
rJMSF039P03+ TAGAATATATCG
rJMFF030I22+ TAGAATATATCGT
rJMFF013H24+ TAGAATATATCGTGTATCAGACGTATCCGGNAAGAGATAA
rJMFF008L02+ TAGAATATATCGTGTATCAGACGTATCCGGTAAGAGATAA
rJMFF040M10+ TAGAATATATCGTGTATCAGACGTATCCGGTAAGAGATAA
JMFN013D01+ TAGAATATATCGTGTATCAGACGTATCCGGTAAGAGATAATATTATAAATGCTCATCAGA
                      ____________________________________________________________
consensus TAGAATATATCGTGTATCAGACGTATCCGGTAAGAGATAATATTATAAATGCTCATCAGA
 
. : . : . : . : . : . :
JMFN013D01+ GTTGCATTCTATGTTCXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTCTCTCTCTCTC
                      ____________________________________________________________
consensus GTTGCATTCTATGTTCNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTCTCTCTCTCTC