Contig 013018:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN044L18+                                                                    AGG
JMFN010E20+                                                          ATTACTCCTCAGG
                      ____________________________________________________________
consensus                                                            ATTACTCCTCAGG
 
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JMFN044L18+           CAGGCTTCATCTTCTATCTGTTTCCCAGTCCGCACATTATCGTTCAAGTTTCTTGAAGAT
JMFN010E20+           CAGGCTTCATCTTCTATCTGTTTCCCAGTCCGCACATTCTCGTTCAAGTTTCTTGAAGAT
                      ____________________________________________________________
consensus             CAGGCTTCATCTTCTATCTGTTTCCCAGTCCGCACATTCTCGTTCAAGTTTCTTGAAGAT
 
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JMFN044L18+           CAAAGAAGCCCATCAATGGAAGTTTGTAGATCTGTGATTCCGACGCTTTATTCTGTTCAT
JMFN010E20+           CAAAGAAGCCCATCAATGGAAGTTTGTAGATCTGTGATTCCGACGCTTTATTCTGTTCAT
                      ____________________________________________________________
consensus             CAAAGAAGCCCATCAATGGAAGTTTGTAGATCTGTGATTCCGACGCTTTATTCTGTTCAT
 
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JMFN044L18+           ATTTTTATTAATTTCTTCGGAAGAAAAACAAGAAAAAAGGGAGAAGGGTGATGAAGTAAG
JMFN010E20+           ATTTTTATTAATTTCTTCAGAAGAAAAACAAGAAAAAAGGGAGAAGGGTGATGAAGTAAG
                      ____________________________________________________________
consensus             ATTTTTATTAATTTCTTCGGAAGAAAAACAAGAAAAAAGGGAGAAGGGTGATGAAGTAAG
 
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JMFN044L18+           GTACAGAGGTTTTGGGGGAGATGGATGGAGAAGAAGGTGGTGGGTTGTAGAAGTAGAATG
JMFN010E20+           GTACAGAGGTTTTGGGGGAGATGGATGGAGAAGAAGGTGGTGGGTTGTAGAAGTAGAATG
                      ____________________________________________________________
consensus             GTACAGAGGTTTTGGGGGAGATGGATGGAGAAGAAGGTGGTGGGTTGTAGAAGTAGAATG
 
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JMFN044L18+           GGAAGTAGGGGTCGATTGGGTTAGGGGGCGGAGGGGTTGGGCCGGAGGGGTAGTTCTTGT
JMFN010E20+           GGAAGTAGGGGACGATTGGGTTAGGGGGCGGAGGGGTTGGGCCGGAGGGGTAGTTCTTGT
                      ____________________________________________________________
consensus             GGAAGTAGGGGTCGATTGGGTTAGGGGGCGGAGGGGTTGGGCCGGAGGGGTAGTTCTTGT
 
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JMFN044L18+           AGGGTGGGGGGAAGTAGTACCCCACCCCTCCGCCGCTGGGGGGAGTGTAGGGTGGGTAGT
JMFN010E20+           AGGGTGGGGGGAAGTAGTACCCCACCCCTCCGCCGCTGGGGGGAGTGTAGGGTGGGTAGT
                      ____________________________________________________________
consensus             AGGGTGGGGGGAAGTAGTACCCCACCCCTCCGCCGCTGGGGGGAGTGTAGGGTGGGTAGT
 
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JMFN044L18+           TGGAGGTTGGCGGCGGCGGTGGGGAGTAGTAATTGGTGCCGCCGCCGCTTGAGGTGGGAG
JMFN010E20+           TGGAGGTTGGCGGCGGCGGTGGGGAGTAGTAATTGGTGCCGCCGCCGCTTGAGGTGGGAG
                      ____________________________________________________________
consensus             TGGAGGTTGGCGGCGGCGGTGGGGAGTAGTAATTGGTGCCGCCGCCGCTTGAGGTGGGAG
 
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JMFN044L18+           GAGAGGGTGGTGGAGGGCAGTTGAGGGTGGAGGGCGGCGGCGGAGAGGGAGGAGGTGGGG
JMFN010E20+           GAGAGGGTGGTGGAGGGCAGTTGAGGGTGGAGGGCGGCGGCGGAGAGGGAGGAGGTGGGG
                      ____________________________________________________________
consensus             GAGAGGGTGGTGGAGGGCAGTTGAGGGTGGAGGGCGGCGGCGGAGAGGGAGGAGGTGGGG
 
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JMFN044L18+           AAGGGGTGGTGCAAGGATTGTCACAGGCGGAGCACATTGTGCACTCGATTTGGTAC    
JMFN010E20+           AAGGGGTGGTGCAAGGATTGTCACAGGCGGAGCACATTGTGCACTCGATTTGGTACTTGG
                      ____________________________________________________________
consensus             AAGGGGTGGTGCAAGGATTGTCACAGGCGGAGCACATTGTGCACTCGATTTGGTACTTGG
 
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JMFN010E20+           ATCCAGCCCATTCGCCACTCGCCGTAGATATCACCAAACTTGCCAACAAACAAATCTTGA
                      ____________________________________________________________
consensus             ATCCAGCCCATTCGCCACTCGCCGTAGATATCACCAAACTTGCCAACAAACAAATCTTGA