Contig 013010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017L23Sequence537005298 (5)ref|XP_009631006.1|2e-52PREDICTED: uncharacterized protein LOC104120853 isoform X1 [Nicotiana tomentosi716013010 (4)ref|XP_009797985.1|3e-51PREDICTED: uncharacterized protein LOC104244291 isoform X2 [Nicotiana sylvestri
JMFF035C16Sequence492005298 (5)ref|XP_009631006.1|3e-61PREDICTED: uncharacterized protein LOC104120853 isoform X1 [Nicotiana tomentosi785013010 (4)ref|XP_009797985.1|1e-57PREDICTED: uncharacterized protein LOC104244291 isoform X2 [Nicotiana sylvestri
JMFN005F08Sequence444013010 (4)ref|XP_009797985.1|1e-16PREDICTED: uncharacterized protein LOC104244291 isoform X2 [Nicotiana sylvestri
JMSF040E17Sequence679005298 (5)ref|XP_009797984.1|3e-65PREDICTED: uncharacterized protein LOC104244291 isoform X1 [Nicotiana sylvestri678013010 (4)ref|XP_009797984.1|1e-32PREDICTED: uncharacterized protein LOC104244291 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF035C16+ CGTCATGCTTTGNTTTATGA
                      ____________________________________________________________
consensus CGTCATGCTTTGNTTTATGA
 
. : . : . : . : . : . :
rJMFF017L23+ CATGGGAATGGGTTGATCTTAAAGAGATTCCACCTGATGA
rJMFF035C16+ TGNTAATGCTCCGAATGAAACATGGGAATGGGTTGATCTTAAAGAGATTCCACCTGATGA
                      ____________________________________________________________
consensus TGNTAATGCTCCGAATGAAACATGGGAATGGGTTGATCTTAAAGAGATTCCACCTGATGA
 
. : . : . : . : . : . :
rJMFF017L23+ TATCCGATGGATAGGTGATGATCCTGTTATATCTCGAGGAGGTGGATGTGGTGGTGGAGG
rJMFF035C16+ TATCCGATGGATAGGTGATGATCCTGTTATATCTCGAGGAGGTGGATGTGGTGGTGGAGG
                      ____________________________________________________________
consensus TATCCGATGGATAGGTGATGATCCTGTTATATCTCGAGGAGGTGGATGTGGTGGTGGAGG
 
. : . : . : . : . : . :
rJMSF040E17+ GGTGGAGGTAGTGTTCAAGGCTCTGCATTTAGCATTCAAAGAGGTGGAAG
rJMFF017L23+ CGGAGGCGGAGGTGGAGGTAGTGTTCAAGGCTCTGCATTTAGCATTCAAAGAGGTGGAAG
rJMFF035C16+ CGGAGGCGGAGGTGGAGGTAGTGTTCAAGGCTCTGCATTTAGCATTCAAAGAGGTGGAAG
                      ____________________________________________________________
consensus CGGAGGCGGAGGTGGAGGTAGTGTTCAAGGCTCTGCATTTAGCATTCAAAGAGGTGGAAG
 
. : . : . : . : . : . :
rJMSF040E17+ TTTCTCAAGAGACCAATGTCGGAAGGAAGTTCGGCCGGTGCAGAATGGGGTCATGAAGAA
rJMFF017L23+ TTTCTCAAGAGACCAATATCGGAAGGAAGTTCGGCCGGTGCAGAATGGGGTCATGAAGAA
rJMFF035C16+ TTTCTCAAGAGACCAATGTCGGAAGGAAGTTCGGCCGGTGCAGAATGGGGTCATGAAGAA
                      ____________________________________________________________
consensus TTTCTCAAGAGACCAATGTCGGAAGGAAGTTCGGCCGGTGCAGAATGGGGTCATGAAGAA
 
. : . : . : . : . : . :
rJMSF040E17+ GGCAGCTAGTGATGAAATTGAAATACTGCACACAGAAACTTTGATAAAAAAGGTAGAGAA
rJMFF017L23+ GGCAGCTAGTGATGAAATTGAAATACTGCACACAGAAACTTTGATAAAAAAGGTAGAGAA
rJMFF035C16+ GGCAGCTAGTGATGAAATTGAAATACTGCACACAGAAACTTTGATAAAAAAGGTAGAGAA
                      ____________________________________________________________
consensus GGCAGCTAGTGATGAAATTGAAATACTGCACACAGAAACTTTGATAAAAAAGGTAGAGAA
 
. : . : . : . : . : . :
rJMSF040E17+ AGTGATTGATGCTAGTCCTCCTAATTTGATTGAGATTCAAAAGGCCAAGAAGATGCTAAA
rJMFF017L23+ AGTGATTGATGCTAGTCCTCCTAATTTGATTGAGATTCAAAAGGCCAAGAAGATGCTAAA
rJMFF035C16+ AGTGATTGATGCTAGTCCTCCTAATTTGATTGAGATTCAAAAGGCCAAGAAGATGCTAAA
JMFN005F08+ TCAAAAGGCCAAGAAGATGCTAAA
                      ____________________________________________________________
consensus AGTGATTGATGCTAGTCCTCCTAATTTGATTGAGATTCAAAAGGCCAAGAAGATGCTAAA
 
. : . : . : . : . : . :
rJMSF040E17+ GGATCATGAAAAATCATTAATGGATGTGATTGCAAAGTTAGCAGATGCGTGTGATCGAGG
rJMFF017L23+ GGATCATGAAAAATCATTAATGGATGTGATTGCAAAGTTAGCAGATGCGTGTGATCGAGG
rJMFF035C16+ GGATCATGAAAAATCATTAATGGATGTGATTGCAAAGTTAGCAGATGCGTGTGATCGAGG
JMFN005F08+ GGATCATGAAAAATCATTAATGGATGTGATTGCAAAGTTAGCAGATGCGTGTGATCGAGG
                      ____________________________________________________________
consensus GGATCATGAAAAATCATTAATGGATGTGATTGCAAAGTTAGCAGATGCGTGTGATCGAGG
 
. : . : . : . : . : . :
rJMSF040E17+ AAATGATGGACAACAGATCCTGCACA-AAATTCACAATACAATCACTTAAGGGTGGACAT
rJMFF017L23+ AAATGATGGACAACAGATCCTGCACAGAAATTCACAATACAATCACTTAAGGGTGGACAT
rJMFF035C16+ AAATGATGGACAACAGATCCTGCACAGAAATTCACAATACAATCACTTAAGGGTGGACAT
JMFN005F08+ AAATGATGGACAACAGATCCTGCACAGAAATTCACAATACAATCACTTAAGGGTGGACAT
                      ____________________________________________________________
consensus AAATGATGGACAACAGATCCTGCACAGAAATTCACAATACAATCACTTAAGGGTGGACAT
 
. : . : . : . : . : . :
rJMSF040E17+ AGATCCCGAGACTCGAGGACGTGGCAGCAGTCAAGAAATGGCAAGGGTTCAAGGGATATC
rJMFF017L23+ AGATCCCGAGACTCGAGGACGTGGCAGCAGTCAAGAAATGGCAAGGGTTCAAGGGATATC
rJMFF035C16+ AGATCCCGAGACTCGAGGACGTGGCAGCAGTCAAGAAATGGCAAGGGTTCAAGGGATATC
JMFN005F08+ AGATCCCGAGACTCGAGGACGTGGCAGCAGTCAAGAAATGGCAAGGGTTCAAGGGATATC
                      ____________________________________________________________
consensus AGATCCCGAGACTCGAGGACGTGGCAGCAGTCAAGAAATGGCAAGGGTTCAAGGGATATC
 
. : . : . : . : . : . :
rJMSF040E17+ CGATCAGCAGGACGAGGAGATTGTTGTTATCTAGGGTTTCCTTCTCTTGATCAGTCATAT
rJMFF017L23+ CGATCAGCAGGACGAGGAGATTGTTGTTATCTAGGGTTTCCTTCTCTTGATCAGTCATAT
rJMFF035C16+ CGATCAGCAGGACGAGGAGATTGTTGTTATNTAGGGTTTCCTTCTCTTGATCAGTCATAT
JMFN005F08+ CGATCAGCAGGACGAGGAGATTGTTGTTATCTAGGGTTTCCTTCTCTTGATCAGTCATAT
                      ____________________________________________________________
consensus CGATCAGCAGGACGAGGAGATTGTTGTTATCTAGGGTTTCCTTCTCTTGATCAGTCATAT
 
. : . : . : . : . : . :
rJMSF040E17+ TTAAAAATGCATTTAGGAAATCAGTATTTGGTAGGCCCCTTTATTAGCTTTCATTTGTTT
rJMFF017L23+ TTAAAAATGCATTTAGGAAATCAGTATTTGGTAGGCCCCTTTATTAGCTTTCATTTGTTT
rJMFF035C16+ TTAAAAATGCATTTAGGAAATCAGTATTTGGTAGGCCCCTTTATTAGCTTTCATTTGTTT
JMFN005F08+ TTAAAAATGCATTTAGGAAATCAGTATTTGGTAGGCCCCTTTATTAGCTTTCATTTGTTT
                      ____________________________________________________________
consensus TTAAAAATGCATTTAGGAAATCAGTATTTGGTAGGCCCCTTTATTAGCTTTCATTTGTTT
 
. : . : . : . : . : . :
rJMSF040E17+ AACATAGTGATGGCTGTATGCATGCTAGCCAGCAAGCTACCTTTGTGGAAATATGTATTT
rJMFF017L23+ AACATAGTGATGGCTGTATGCATGCTAGCCAGCAAGCTACCTTTGTGGAAATATGTATTT
rJMFF035C16+ AACATAGTGATGGCTGTATGCATGCTAGCCAGCAAGCTACCTTTGTGGAAATATGTATTT
JMFN005F08+ AACATAGTGATGGCTGTATGCATGCTAGCCAGCAAGCTACCTTTGTGGAAATATGTATTT
                      ____________________________________________________________
consensus AACATAGTGATGGCTGTATGCATGCTAGCCAGCAAGCTACCTTTGTGGAAATATGTATTT
 
. : . : . : . : . : . :
rJMSF040E17+ CC
rJMFF017L23+ CCAGTGT
rJMFF035C16+ CCAGTGTTGGAGACAATGTAAAAACATTTTCTTTGTATATCAATT
JMFN005F08+ CCAGTGTTGGAGACAATGTAAAAACATTTTCTTTGTATATCAATTTCATGTATTGCAACC
                      ____________________________________________________________
consensus CCAGTGTTGGAGACAATGTAAAAACATTTTCTTTGTATATCAATTTCATGTATTGCAACC