Contig 012995:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049F17Sequence585012995 (2)gb|KDP29329.1|4e-47hypothetical protein JCGZ_18250 [Jatropha curcas]611019186ref|XP_009609686.1|3e-12PREDICTED: HD domain-containing protein 2 [Nicotiana tomentosiformis]
JMFS093B02Sequence621012995 (2)gb|KDP29329.1|6e-72hypothetical protein JCGZ_18250 [Jatropha curcas]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS093B02+ ACTCTGCCCAAAGTTCCTGGATCTCTTCAGCTCTCA
                      ____________________________________________________________
consensus ACTCTGCCCAAAGTTCCTGGATCTCTTCAGCTCTCA
 
. : . : . : . : . : . :
JMFS093B02+ TTCCTCCACCAAGAATTTCGCACATTTCATTCAGTGCAGCTTTCTCTCTTCTGCTTTTTT
                      ____________________________________________________________
consensus TTCCTCCACCAAGAATTTCGCACATTTCATTCAGTGCAGCTTTCTCTCTTCTGCTTTTTT
 
. : . : . : . : . : . :
JMFS093B02+ CTTCTTTAGGCACGCCATCAGATGGAGTAATATCTCCAACAATTGCTTCTGCAATATCGT
JMFF049F17+ CATCAGATGGAGTAATATCTCCAACAATTGCTTCTGCAATATCGT
                      ____________________________________________________________
consensus CTTCTTTAGGCACGCCATCAGATGGAGTAATATCTCCAACAATTGCTTCTGCAATATCGT
 
. : . : . : . : . : . :
JMFS093B02+ GAACAATGGCTATTTTAATACACCTTTCCCTGTTGACTCCAGGAAGATCACCAGCAATCA
JMFF049F17+ GAACAATGGCTATTTTAATACACCTTTCCCTGTTGACTCCAGGAAGATCACCAGCAATCA
                      ____________________________________________________________
consensus GAACAATGGCTATTTTAATACACCTTTCCCTGTTGACTCCAGGAAGATCACCAGCAATCA
 
. : . : . : . : . : . :
JMFS093B02+ GGGCCATCAGGGCCATGCGATACATGTGATCAGCGATGGATTCGGGGCCTCTGATCCCAT
JMFF049F17+ GGGCCATCAGGGCCATGCGATACATGTGATCAGCGATGGATTCGGGGCCTCTGATCCCAT
                      ____________________________________________________________
consensus GGGCCATCAGGGCCATGCGATACATGTGATCAGCGATGGATTCGGGGCCTCTGATCCCAT
 
. : . : . : . : . : . :
JMFS093B02+ GATTTATCCATCCCTTCCGTTTTGTAGTCTTTAGACTATGGCAAAGCGTGAGAAAATCAA
JMFF049F17+ GATTTATCCATCCCTTCCGTTTTGTAGTCTTTAGACTATGGCAAAGCGTGAGAAAATCAA
                      ____________________________________________________________
consensus GATTTATCCATCCCTTCCGTTTTGTAGTCTTTAGACTATGGCAAAGCGTGAGAAAATCAA
 
. : . : . : . : . : . :
JMFS093B02+ TGGCATTAGAAGGGGAAGACGAAGCTCCGGCGGCGCTGCAATCCTGACTCAACGAGGCGG
JMFF049F17+ TGGCATTAGAAGGGGAAGACGAAGCTCCGGCGGCGCTGCAATCCTGACTCAACGAGGCGG
                      ____________________________________________________________
consensus TGGCATTAGAAGGGGAAGACGAAGCTCCGGCGGCGCTGCAATCCTGACTCAACGAGGCGG
 
. : . : . : . : . : . :
JMFS093B02+ GGCTTCCGGACCCAGATCCGAATCCGGCCCCATTCGGGTCGGCCTTGACGGAATCGGAAT
JMFF049F17+ GGCTTCCGGACCCAGATCCGAATCCGGCCCCATTCGGGTCGGCCTTGACGGAATCGGAAT
                      ____________________________________________________________
consensus GGCTTCCGGACCCAGATCCGAATCCGGCCCCATTCGGGTCGGCCTTGACGGAATCGGAAT
 
. : . : . : . : . : . :
JMFS093B02+ CGGGCATTTGGGAACGAAGCGAAACGGGCCTGGGCCCGCGCCTGGCGTTTCGAGAGCGGG
JMFF049F17+ CGGGCATTTGGGAACGAAGCGAAACGGGCCTGGGCCCGCGCCTGGCGTTTCGAGAGCGGG
                      ____________________________________________________________
consensus CGGGCATTTGGGAACGAAGCGAAACGGGCCTGGGCCCGCGCCTGGCGTTTCGAGAGCGGG
 
. : . : . : . : . : . :
JMFS093B02+ AGTTGAAAAAGAAAGAAACTTGTTTCCGGGAAATCGGGTTGGAACAATGTGTGAGCGCGT
JMFF049F17+ AGTTGAAAAAGAAAGAAACTTGTTTCCGGGAAATCGGGTTGGAACAATGTGTGAGCGCGT
                      ____________________________________________________________
consensus AGTTGAAAAAGAAAGAAACTTGTTTCCGGGAAATCGGGTTGGAACAATGTGTGAGCGCGT
 
. : . : . : . : . : . :
JMFS093B02+ AGGGAGAGTGCGACGGCGGCGATAGGGAAAGCGAAGCAAAGCTGT
JMFF049F17+ AGGGAGAGTGCGACGGCGGCGATAGGGAAAGCGAAGCAAAGCTGTGGTTAGCAGCCATGG
                      ____________________________________________________________
consensus AGGGAGAGTGCGACGGCGGCGATAGGGAAAGCGAAGCAAAGCTGTGGTTAGCAGCCATGG
 
. : . : . : . : . : . :
JMFF049F17+ TTGCAGAGCGGTTTTGATTTGTTGTGATTTATTGATTTGTTTGTCGGATTGCAGGACTCC
                      ____________________________________________________________
consensus TTGCAGAGCGGTTTTGATTTGTTGTGATTTATTGATTTGTTTGTCGGATTGCAGGACTCC