Contig 012992:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048N17Sequence467012992 (3)gb|EYU25255.1|1e-10hypothetical protein MIMGU_mgv1a015858mg [Erythranthe guttata]406012992 (3)
JMFN028L12Sequence533012992 (3)gb|EYU25255.1|2e-10hypothetical protein MIMGU_mgv1a015858mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF048N17- CCTTATGGCGGATC
                      ____________________________________________________________
consensus CCTTATGGCGGATC
 
. : . : . : . : . : . :
rJMFF048N17- ACCCTGGAGAGTTTTTTTTTTTTTTTTGCCAATCAAATCAACAAAAGAGTTTTCACAACA
JMFN028L12+ TGCCAATCAAATCAACAAAAGAGTTTTCACAACA
                      ____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTTGCCAATCAAATCAACAAAAGAGTTTTCACAACA
 
. : . : . : . : . : . :
rJMFF048N17- CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
JMFN028L12+ CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
                      ____________________________________________________________
consensus CCATTCACTTCACATTATCTATTATTGCTCTCAAACATAGTATAAAAATTCCAAAACTCC
 
. : . : . : . : . : . :
rJMFF048N17- AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
JMFN028L12+ AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
                      ____________________________________________________________
consensus AACAAAGCAACATTGATGGGACCGAGTAGCAATACACTCCACTCCAAAAGGATATAATAC
 
. : . : . : . : . : . :
rJMFF048N17- AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
JMFN028L12+ AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
JMFF048N17+ GAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
                      ____________________________________________________________
consensus AATAAAAATTTTCGAGCATAAAAGATAAAGATGTGACATTTACCAAAGATTTGATGGATC
 
. : . : . : . : . : . :
rJMFF048N17- TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
JMFN028L12+ TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
JMFF048N17+ TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
                      ____________________________________________________________
consensus TATCGACGGAAGAGGGATCATACGGGGAGCTTTTCAACGGAGGCCGCTAGGGTGTCAGGT
 
. : . : . : . : . : . :
rJMFF048N17- TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
JMFN028L12+ TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
JMFF048N17+ TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
                      ____________________________________________________________
consensus TTAGGGTTAGGGCTCAAGCTGTCAGGGTCGATGTGAGAAGGAGTGAGGGAATTGATCATG
 
. : . : . : . : . : . :
rJMFF048N17- AGGGGGACATTCTTGGCCTCTTCATCATCCTC
JMFN028L12+ AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
JMFF048N17+ AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
                      ____________________________________________________________
consensus AGGGGGACATTCTTGGCCTCTTCATCATCCTCGTCGTCGCTGTCGAAGGTGTTAAGGTGG
 
. : . : . : . : . : . :
JMFN028L12+ ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
JMFF048N17+ ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
                      ____________________________________________________________
consensus ACACAGGAGCAACGCTCCAAGGAGGCGAAGAACGCCGACGCGACGCTTGAGCCAAACCAC
 
. : . : . : . : . : . :
JMFN028L12+ CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
JMFF048N17+ CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
                      ____________________________________________________________
consensus CGAGCCAGACCGTCCAGCTTATCGATGTTGGTGTTCTCCATATCTATCCAGCGGAGATTC
 
. : . : . : . : . : . :
JMFN028L12+ AC
JMFF048N17+ ACAAAACCCTACAGAGAATTTCTGGAGTAAGGTTTCCCTTTGTCTCAATCCAACGCGATT
                      ____________________________________________________________
consensus ACAAAACCCTACAGAGAATTTCTGGAGTAAGGTTTCCCTTTGTCTCAATCCAACGCGATT
 
. : . : . : . : . : . :
JMFF048N17+ TAGAGCGACAAAGAAGTGGAAGAAGGAGAAGAATACAACAAGGCACTCTACAGACAGAAT
                      ____________________________________________________________
consensus TAGAGCGACAAAGAAGTGGAAGAAGGAGAAGAATACAACAAGGCACTCTACAGACAGAAT