| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D23 | Sequence | 441 | 012988 (8) | emb|CDO97931.1| | 8e-70 | unnamed protein product [Coffea canephora] | 554 | 012988 (8) | gb|AIE54289.1| | 6e-42 | psi14B protein [Nicotiana tabacum] |
| JMFF008E16 | Sequence | 565 | 012988 (8) | emb|CDO97931.1| | 2e-97 | unnamed protein product [Coffea canephora] | 552 | 012988 (8) | ref|XP_009765962.1| | 2e-40 | PREDICTED: inorganic pyrophosphatase 1-like [Nicotiana sylvestris] |
| JMFF048B15 | Sequence | 433 | 012988 (8) | emb|CDO97931.1| | 6e-66 | unnamed protein product [Coffea canephora] | 245 | 012988 (8) | |||
| JMSF047F08 | Sequence | 633 | 012988 (8) | emb|CDO97931.1| | 5e-114 | unnamed protein product [Coffea canephora] | 721 | 012988 (8) | gb|AIE54289.1| | 8e-85 | psi14B protein [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMFF008E16- AACTTGTGGCAGAACATTGCCCTTTTGGGTCTTGAGGCAGAC
rJMFF005D23- AACTTGTGGCAGAACATTGCCCTTTTGGGTCTTGAGGCAGAC
rJMSF047F08- ATTGCCCTTTTGGGTCTTGAGGCAGAC
____________________________________________________________
consensus AACTTGTGGCAGAACATTGCCCTTTTGGGTCTTGAGGCAGAC
. : . : . : . : . : . :
rJMFF008E16- AGAATTTCATCCACAAACTGGAACTACTGAAGTTACTTAGGTTGCTGAATACAACATTAA
rJMFF005D23- AGAATTTCATCCACAAACTGGAACTACTGAAGTTACTTAGGTTGCTGAATACAACATTAA
rJMFF048B15- TCCACAAACTGGAACTACTGAAGTTACTTAGGTTGCTGAATACAACATTAA
rJMSF047F08- AGAATTTCATCCACAAACTGGAACTACTGAAGTTACTTAGGTTGCTGAATACAACATTAA
____________________________________________________________
consensus AGAATTTCATCCACAAACTGGAACTACTGAAGTTACTTAGGTTGCTGAATACAACATTAA
. : . : . : . : . : . :
rJMFF008E16- AAGATAATTAGATGCTGTTTGCAAGCAATTAAGCTGCAGAATGACTGTTTTTTTTTTTGT
rJMFF005D23- AAGATAATTAGATGCTGTTTGCAAGCAATTAAGCTGCAGAATGACTGTTTTTTTTTTTGT
rJMFF048B15- AAGATAATTAGATGCTGTTTGCAAGCAATTAAGCTGCAGAATGACTG-TTTTTTTTTTGT
rJMSF047F08- AAGATAATTAGATGCTGTTTGCAAGCAATTAAGCTGCAGAATGACTG-TTTTTTTTTTGT
____________________________________________________________
consensus AAGATAATTAGATGCTGTTTGCAAGCAATTAAGCTGCAGAATGACTGTTTTTTTTTTTGT
. : . : . : . : . : . :
rJMFF008E16- TTTCTTGAAAAACAAAACTAAAAAGGCNCTCGGATANCTTTGGGCAAANCTTCNCAAGGC
rJMFF005D23- TTTCTTGAAAAACAAAACTAAAAAGGCNCTCGGATANNTTTGGGCAAANCTTCNCAAGGN
rJMFF048B15- TTTCTTGAAGAACAGAACTAGAAAGGCACTCGGATAGCTTTGGGCAAAGCTTCACAAGGC
rJMSF047F08- TTTCTTGAANAACANAACTAGAAAGGCACTCGGATAGCTTTGGGCANAGCTTCACAAGGC
____________________________________________________________
consensus TTTCTTGAAAAACAAAACTAGAAAGGCACTCGGATAGCTTTGGGCAAAGCTTCACAAGGC
. : . : . : . : . : . :
rJMFF008E16- TGCNTGGAAATGGCCTGGAACTTGGATTCACCCNCCAAAAATTGACTGNCTTCAATGCAA
rJMFF005D23- TGCATGGAAATGGCCTGGAACTTGNATTCACCCNCCAAAAATTGACTGTCTTCAATGCAA
rJMFF048B15- TGCATGGAAATGGCCTGGAACTTGGATTCAGCCGCCAGAAATTGACTGTCTTCAATGCAA
rJMSF047F08- TGCATGGAAATGGCCNGGAACTTGGATTCAGCCGCCANAAATTGACNGTCTTCAANGCAA
____________________________________________________________
consensus TGCATGGAAATGGCCTGGAACTTGGATTCAGCCGCCAAAAATTGACTGTCTTCAATGCAA
. : . : . : . : . : . :
rJMFF008E16- ATCCTGTTAATGAAATGAAACAGGATCCTCTCAAAGNCTTCNCCATTGCTCCATTCATGA
rJMFF005D23- ATCCTGTTAATGAAATNAAACAGGATCCTCTCAAAGNCTTCNCCATTGCTCCATTCATGA
rJMFF048B15- ATCCTGTTAATGA
rJMSF047F08- ATCCNGTTAATGANATGAAACAGGATCCTCTCAAAGTCTTCACCATTGCTCCATTCATGA
____________________________________________________________
consensus ATCCTGTTAATGAAATGAAACAGGATCCTCTCAAAGTCTTCACCATTGCTCCATTCATGA
. : . : . : . : . : . :
rJMFF008E16- ATCNCTGCTTCTAAAAGGGATCTGTTTTCTTTGATCAACTCCCAAACNGGNAAGTCTTTC
rJMFF005D23- ATCTCTGCTTCNAAAAGGGATCTGTTTTCTTTGATCAACTCCCAAACNGGNAAGTCTTTC
rJMSF047F08- ATCTCTGCTTCTANAAGGGATCTGTTTTCTTTGATCAACTCCCANACNGGGAAGTCTTTC
____________________________________________________________
consensus ATCTCTGCTTCTAAAAGGGATCTGTTTTCTTTGATCAACTCCCAAACNGGGAAGTCTTTC
. : . : . : . : . : . :
rJMFF008E16- CNGGGCATCATAAAGTCNCCNGCTTTCANCTTCAAGCTTGGGCAAAAATCNCCAATCCCN
rJMFF005D23- CNGGGCATCANAAAGTCNCCNGCTTTCANCTTCAAGCTTGGGCAAAAATCCCCAATCCCA
rJMSF047F08- CNGGGCATCATAAAGTCTCCNGCTTTCAGCTTCAAGCTNGGGCANAAATCGCCAATCCCA
JMSF047F08+ CTTCAAGCTTGGGCAGAAATCGCCAATCCCA
____________________________________________________________
consensus CNGGGCATCATAAAGTCTCCNGCTTTCAGCTTCAAGCTTGGGCAAAAATCGCCAATCCCA
. : . : . : . : . : . :
rJMFF008E16- TCTCCCAGGNAAATCACCCTCTTCTTCCCTTCCTTACCCATAAATGCTTGAATCCTTTCA
rJMFF005D23- TCTCCCAGGNAAATCACCCTCTTCTTCCCTTCCTTACCCANAAANGCTTGAATCCTTTCA
rJMSF047F08- TCTCCCAGGTANATCACCCTCTTCTTCCCTTCCTTACCCATANATGCTTGAATCCTTTCA
JMFF008E16+ CTTACCCATAGATGCTTGAATCCTTTCA
JMSF047F08+ TCTCCCAGGTAGATCACCCTCTTCTTCCCTTCCTTACCCATAGATGCTTGAATCCTTTCA
____________________________________________________________
consensus TCTCCCAGGTAAATCACCCTCTTCTTCCCTTCCTTACCCATAGATGCTTGAATCCTTTCA
. : . : . : . : . : . :
rJMFF008E16- ANAATCTTACNCTTGCACATGTTGGGAGGG
rJMFF005D23- ANAATCTTACTCTTGCACATGTTGGGAGGG
rJMSF047F08- ATAATCTTACTCTTGCACATGTTGGGAGGGCAGCGAGCACAGCCATGGGGAGAANAATGG
JMFF008E16+ ATAATCTTACTCTTGCACATGTTGGGAGGGCAGCGAGCACAGCCATGGGGAGAAGAATGG
JMSF047F08+ ATAATCTTACTCTTGCACATGTTGGGAGGGCAGCGAGCACAGCCATGGGGAGAAGAATGG
____________________________________________________________
consensus ATAATCTTACTCTTGCACATGTTGGGAGGGCAGCGAGCACAGCCATGGGGAGAAGAATGG
. : . : . : . : . : . :
rJMSF047F08- AAGTCATGGAAAGGGAGGATTCTAAGGCGGCCTTCCTCGTCGACATAGCCAGGATTAGTG
JMFF008E16+ AAGTCATGGAAAGGGAGGATTCTAAGGCGGCCTTCCTCGTCGACATAGCCAGGATTAGTG
JMFF005D23+ TCGTCGACATAGCCAGGATTAGTG
JMSF047F08+ AAGTCATGGAAAGGGAGGATTCTAAGGCGGCCTTCCTCGTCGACATAGCCAGGATTAGTG
JMFF048B15+ GCCAGGATTAGTG
____________________________________________________________
consensus AAGTCATGGAAAGGGAGGATTCTAAGGCGGCCTTCCTCGTCGACATAGCCAGGATTAGTG
. : . : . : . : . : . :
rJMSF047F08- TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAANAAA
JMFF008E16+ TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAAGAAA
JMFF005D23+ TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAAGAAA
JMSF047F08+ TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAAGAAA
JMFF048B15+ TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAAGAAA
____________________________________________________________
consensus TTGATCTCCGAGAAACATTCTCGGATTCCCAGATGTTTCAAGATTGTTTCGATGAAGAAA
. : . : . : . : . : . :
rJMSF047F08- AGGTTTGCATCGCTCACTATCCTCAAATCACACCC
JMFF008E16+ AGGTTTGCATCGCTCACTATCCTCAAATCACACCCTAAACCGTGAACTGCTTTTATAGCC
JMFF005D23+ AGGTTTGCATCGCTCACTATCCTCAAATCACACCCTAAACCGTGAACTGCTTTTATAGCC
JMSF047F08+ AGGTTTGCATCGCTCACTATCCTCAAATCACACCCTAAACCGTGAACTGCTTTTATAGCC
JMFF048B15+ AGGTTTGCATCGCTCACTATCCTCAAATCACACCNTAAACCGTGAACTGCTTTTATAGCC
____________________________________________________________
consensus AGGTTTGCATCGCTCACTATCCTCAAATCACACCCTAAACCGTGAACTGCTTTTATAGCC
. : . : . : . : . : . :
JMFF008E16+ GGAACAATCCGGGGATGAATCGGGACGCCCTGGAGAACTCGTTCGATGTCCCCGATTGTC
JMFF005D23+ GGAACAATCCGGGGATGAATCGGGACGCCCTGGAGAACTCGTTCGATGTCCCCGATTGTC
JMSF047F08+ GGAACAATCCGGGGATGAATCGGGACGCCCTGGAGAACTCGTTCGATGTCCCCGATTGTC
JMFF048B15+ GGAACAATCCGGGGATGAATCGGGACGCCCTGGAGAACTCGTTCGATGTCCCCGATTGTC
____________________________________________________________
consensus GGAACAATCCGGGGATGAATCGGGACGCCCTGGAGAACTCGTTCGATGTCCCCGATTGTC
. : . : . : . : . : . :
JMFF008E16+ TTCCCGTTCGCATGAATCTCCTTCATCATCCTATCCATGAGAGAATTCCAAGGCATGGTG
JMFF005D23+ TTCCCGTTCGCATGAATCTCCTTCATCATCCTATCCATGAGAGAATTCCAAGGCATGGTG
JMSF047F08+ TTCCCGTTCGCATGAATCTCCTTCATCATCCTATCCATGAGAGAATTCCAAGGCATGGTG
JMFF048B15+ TTCCCGTTCGCATGAATCTCCTTCATCATCCTATCCATGAGAGAATTCCAAGGCATGGTG
____________________________________________________________
consensus TTCCCGTTCGCATGAATCTCCTTCATCATCCTATCCATGAGAGAATTCCAAGGCATGGTG
. : . : . : . : . : . :
JMFF008E16+ TGAAGAAGCTGGTCGAACAATCCGGTGAAGCCCAACTCGTCGACGACCCAGTTATCGCTG
JMFF005D23+ TGAAGAAGCTGGTCGAACAATCCGGTGAAGCCCAACTCGTCGACGACCCAGTTATCGCTG
JMSF047F08+ TGAAGAAGCTGGTCGAACAATCCGGTGAAGCCCAACTCGTCGACGACCCAGTTATCGCTG
JMFF048B15+ TGAAGAAGCTGGTCGAACAATCCGGTGAAGCCCAACTCGTCGACGACCCAGTTATCGCTG
____________________________________________________________
consensus TGAAGAAGCTGGTCGAACAATCCGGTGAAGCCCAACTCGTCGACGACCCAGTTATCGCTG
. : . : . : . : . : . :
JMFF008E16+ TCGACGTCGATGATCGTCTTGTCAAAGTCGAAAACCACGACAGTTCCGGCCGCCATGGGA
JMFF005D23+ TCGACGTCGATGATCGTCTTGTCAAAGTCGAAAACCACGACAGTTCCGGCCGCCATGGGA
JMSF047F08+ TCGACGTCGATGATCGTCTTGTCAAAGTCGAAAACCACGACAGTTCCGGCCGCCATGGGA
JMFF048B15+ TCGACGTCGATGATCGTCTTGTCAAAGTCGAAAACCACGACAGTTCCGGCCGCCATGGGA
____________________________________________________________
consensus TCGACGTCGATGATCGTCTTGTCAAAGTCGAAAACCACGACAGTTCCGGCCGCCATGGGA
. : . : . : . : . : . :
JMFF008E16+ GAACAGACAGGAGAACTCGAAGATTTAAGAAGACTAGAAGAATGTGTTTTTGTGTAC
JMFF005D23+ GAACAGACAGGAGAACTCGAAGATTTAAGAAGACTAGAAGAATGTGTTTTTGTGTAC
JMSF047F08+ GAACAGACAGGAGAACTCGAAGATTTAAGAAGACTAGAAGAATGTGTTTTTGTGTAC
JMFF048B15+ GAACAGACAGGAGAACTCGAAGATTTAAGAAGACTAGAAGAATGTGTTTTTGTGTACGAC
____________________________________________________________
consensus GAACAGACAGGAGAACTCGAAGATTTAAGAAGACTAGAAGAATGTGTTTTTGTGTACGAC