Contig 012982:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047B11Sequence619012982 (2)ref|XP_009605146.1|3e-56PREDICTED: membrin-11-like [Nicotiana tomentosiformis]638012982 (2)ref|XP_009605146.1|7e-81PREDICTED: membrin-11-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF047B11- ACCCTGGAGAGTTTTTTTTTTTTTTTTGGGCAAGTTTAAAAGGGCTGGAT
                      ____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTTGGGCAAGTTTAAAAGGGCTGGAT
 
. : . : . : . : . : . :
rJMFF047B11- CACATATAAATTTTCCTATGTCTATTTGTATGTCTGCTTCAGTTTACAATACTGTGAATC
                      ____________________________________________________________
consensus CACATATAAATTTTCCTATGTCTATTTGTATGTCTGCTTCAGTTTACAATACTGTGAATC
 
. : . : . : . : . : . :
rJMFF047B11- CGGGACCGAAAGATTCAACGGATTGCTAAGCACGGTTCATCGCGTCCACCTCCATATGAC
                      ____________________________________________________________
consensus CGGGACCGAAAGATTCAACGGATTGCTAAGCACGGTTCATCGCGTCCACCTCCATATGAC
 
. : . : . : . : . : . :
rJMFF047B11- AACAAGGATGATGATTGTTACAACCATGCCAGCATACTTGATCCACTTGTCAGTGCGGTT
                      ____________________________________________________________
consensus AACAAGGATGATGATTGTTACAACCATGCCAGCATACTTGATCCACTTGTCAGTGCGGTT
 
. : . : . : . : . : . :
rJMFF047B11- TCTCCTCTCAATCAGTCTTAATAAGGAATTAGATAGCCCCAACGTGTTGAGAACATCCAG
                      ____________________________________________________________
consensus TCTCCTCTCAATCAGTCTTAATAAGGAATTAGATAGCCCCAACGTGTTGAGAACATCCAG
 
. : . : . : . : . : . :
rJMFF047B11- AGCTTTCCTTTGAGCTTGCTTTAACCGGTCCCTCTGCTCACTATATTTAGAAAGAATAGC
JMFF047B11+ CTATATTTAGAAAGAATAGC
                      ____________________________________________________________
consensus AGCTTTCCTTTGAGCTTGCTTTAACCGGTCCCTCTGCTCACTATATTTAGAAAGAATAGC
 
. : . : . : . : . : . :
rJMFF047B11- AGCACCAGTTGCCAAGGTTTCTTCCATCATCTTTGAAGAGCTGCGGACAGACTGCATTGC
JMFF047B11+ AGCACCAGTTGCCAAGGTTTCTTCCATCATC-TTGAAGAGCTGCGGACAGACTGCATTGC
                      ____________________________________________________________
consensus AGCACCAGTTGCCAAGGTTTCTTCCATCATCTTTGAAGAGCTGCGGACAGACTGCATTGC
 
. : . : . : . : . : . :
rJMFF047B11- TTGTGCTTCCTCATCAAAAATCTTAAGAACATGTGATGAATTGCCATTAGCTCTTCCAAG
JMFF047B11+ TTGTGCTTCCTCATCAAAAATCTTAAGAACATGTGATGAATTGCCATTAGCTCTTCCAAG
                      ____________________________________________________________
consensus TTGTGCTTCCTCATCAAAAATCTTAAGAACATGTGATGAATTGCCATTAGCTCTTCCAAG
 
. : . : . : . : . : . :
rJMFF047B11- TAACTCAGCTCTCTCTCGAGCTTCTTGGATCCGTCTCTGATTACGAAGATNATATTTATC
JMFF047B11+ TAACTCAGCTCTCTCTCGAGCTTCTNGGATCCGTCTCTGATTACGAAGATAATATTTATC
                      ____________________________________________________________
consensus TAACTCAGCTCTCTCTCGAGCTTCTTGGATCCGTCTCTGATTACGAAGATAATATTTATC
 
. : . : . : . : . : . :
rJMFF047B11- CNAACTATCTTTCAAGGAGTCGGCCTCTTCAGCCACTTGCTCTACCTTTCTTTTCCAGAG
JMFF047B11+ CAAACTATCTTTCAAGGAGTCGGCCTCTTCAGCCACTTGCTCTACCTTTCTTTTCCAGAG
                      ____________________________________________________________
consensus CAAACTATCTTTCAAGGAGTCGGCCTCTTCAGCCACTTGCTCTACCTTTCTTTTCCAGAG
 
. : . : . : . : . : . :
rJMFF047B11- ATCACGTTGAGACTTGGCAGGAATGGAACGCCNAAGGCGATCCATCTC
JMFF047B11+ ATCACGTTGAGACTTGGCAGGAATGGAACGCCAAAGGCGATCCATCTCGGAACATAGCGA
                      ____________________________________________________________
consensus ATCACGTTGAGACTTGGCAGGAATGGAACGCCAAAGGCGATCCATCTCGGAACATAGCGA
 
. : . : . : . : . : . :
JMFF047B11+ CTGGATCTGAGTGATGTCCTTCCTAACGGCATCGAACAGATGATCGGAAGAGTCTAAGCC
                      ____________________________________________________________
consensus CTGGATCTGAGTGATGTCCTTCCTAACGGCATCGAACAGATGATCGGAAGAGTCTAAGCC
 
. : . : . : . : . : . :
JMFF047B11+ CAACGAGGCGGCGTTCGACGACGATGAGAATGCAACGGAGGAAGACGAGTACTCGAAGCG
                      ____________________________________________________________
consensus CAACGAGGCGGCGTTCGACGACGATGAGAATGCAACGGAGGAAGACGAGTACTCGAAGCG
 
. : . : . : . : . : . :
JMFF047B11+ CTCCAGCTTCTCCAATCCATCTCTGTTCTTCAGCAATAGCCGCCTCGAGCTCTGGTACAG
                      ____________________________________________________________
consensus CTCCAGCTTCTCCAATCCATCTCTGTTCTTCAGCAATAGCCGCCTCGAGCTCTGGTACAG
 
. : . : . : . : . : . :
JMFF047B11+ CTCTGACAGAGTCCCACCCCCACCTCTGACGCCAGCATCTCCGAAGTCGACGGGCATCGC
                      ____________________________________________________________
consensus CTCTGACAGAGTCCCACCCCCACCTCTGACGCCAGCATCTCCGAAGTCGACGGGCATCGC
 
. : . : . : . : . : . :
JMFF047B11+ CATGGTTGATTAAACGGTTGCGGTTTCGTCGATCTCTCCGCAACGATCTTCTCCGGTTGT
                      ____________________________________________________________
consensus CATGGTTGATTAAACGGTTGCGGTTTCGTCGATCTCTCCGCAACGATCTTCTCCGGTTGT