Contig 012976:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045O20Sequence600012976 (4)emb|CDP00111.1|6e-05unnamed protein product [Coffea canephora]620011184 (3)pdb|2JUH|A7e-44Chain A, Solution Structure Of Dna Binding Domain Of Ngtrf1
JMFS053C10Sequence489012976 (4)ref|NP_001233854.1|1e-15telomere binding protein [Solanum lycopersicum] dbj|BAF36749.1| telomere binding
JMSF038F24Sequence102012976 (4)835011184 (3)ref|XP_009785792.1|2e-41PREDICTED: telomere repeat-binding protein 3-like isoform X1 [Nicotiana sylvest
JMSF050E06Sequence675012976 (4)ref|XP_009783131.1|2e-33PREDICTED: telomere repeat-binding protein 4-like [Nicotiana sylvestris]728011184 (3)ref|XP_009785793.1|6e-53PREDICTED: telomere repeat-binding protein 3-like isoform X2 [Nicotiana sylvest

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF050E06+ TCCTATGCTTTGCAAAAGAAGCGCTAGGAACCGGGTCCCTGTACAAGGGCAGC
                      ____________________________________________________________
consensus TCCTATGCTTTGCAAAAGAAGCGCTAGGAACCGGGTCCCTGTACAAGGGCAGC
 
. : . : . : . : . : . :
JMSF050E06+ TGTACACTACAATCTGAGTTATTGAGGGTATTCTTATTAGTAGTAGTTAAAGAAATTTTT
                      ____________________________________________________________
consensus TGTACACTACAATCTGAGTTATTGAGGGTATTCTTATTAGTAGTAGTTAAAGAAATTTTT
 
. : . : . : . : . : . :
JMSF050E06+ ATCGGATCCTTTACACTGCAACCGCCAGCCATAGTTATGTCTCCCGTCTGCATCCCGTCA
                      ____________________________________________________________
consensus ATCGGATCCTTTACACTGCAACCGCCAGCCATAGTTATGTCTCCCGTCTGCATCCCGTCA
 
. : . : . : . : . : . :
JMSF050E06+ TCAGCTAACTGTTGTTTTTGAGTTGCGTTGTTAATGTTAACACTACGTAAATCCCCAAGG
                      ____________________________________________________________
consensus TCAGCTAACTGTTGTTTTTGAGTTGCGTTGTTAATGTTAACACTACGTAAATCCCCAAGG
 
. : . : . : . : . : . :
JMSF050E06+ TTAGACGGTCTTCCTTCCACTTCGCTATTGAAATTCCCTTCAGCATCGAGATTCTTAACG
                      ____________________________________________________________
consensus TTAGACGGTCTTCCTTCCACTTCGCTATTGAAATTCCCTTCAGCATCGAGATTCTTAACG
 
. : . : . : . : . : . :
JMSF050E06+ CTCTCCAACTTGACACCCGGATACACTTTTCCGGAGAACTCGGTAAAAGTGCTCTCTGAG
                      ____________________________________________________________
consensus CTCTCCAACTTGACACCCGGATACACTTTTCCGGAGAACTCGGTAAAAGTGCTCTCTGAG
 
. : . : . : . : . : . :
JMSF050E06+ ACACAACTATTTTCCGAATATGACGATCCACCATTGCCATGCTTGATTTTCTGCTCTTGA
JMFS053C10+ TTTCCGAATATGACGATCCACCATTGCCATGCTTGATTTTCTGCTCTTGA
                      ____________________________________________________________
consensus ACACAACTATTTTCCGAATATGACGATCCACCATTGCCATGCTTGATTTTCTGCTCTTGA
 
. : . : . : . : . : . :
JMSF050E06+ ATTGCGCCTTTGGGTAAAATTGCGCTTTCCACACAGCTTCCCCGATCAAGGCACTCCGGC
JMFS053C10+ ATTGCGCCCCTCCGTAAAATTGCGCTTTCCACACAGCTTCCCCGATCAAGGCACTCCGGC
                      ____________________________________________________________
consensus ATTGCGCCTTTGGGTAAAATTGCGCTTTCCACACAGCTTCCCCGATCAAGGCACTCCGGC
 
. : . : . : . : . : . :
JMSF050E06+ TTCAAAGCTTTGCCTTCTTGAAAATTTCCCAGTTCTTCGGTTACATCTCTCTGAATTGCA
JMFS053C10+ TTCAAAGCTTTGCCTTCTTGAAAATTTCCCAGTTCTTCGGTTACATCTCTNTGAATTGCA
JMFF045O20+ TTCAAAGCTTTGCCTTCTTGAAAATTTCCCAGTTCTTCGGTTACATCTCTCTGAATTGCA
                      ____________________________________________________________
consensus TTCAAAGCTTTGCCTTCTTGAAAATTTCCCAGTTCTTCGGTTACATCTCTCTGAATTGCA
 
. : . : . : . : . : . :
JMSF050E06+ GGTCCATCTTTTCCCTCGGCTGCATTACTAGAAGCCGAGCTTTCACTCTCCAGTAAAAGT
JMFS053C10+ GGTCCATCTTTTCCCTCGGCTGCATTACTAGAAGCCGAGCTTTCACTCTCCAGTAAAAGT
JMFF045O20+ GGTCCATCTTTTCCCTCGGCTGCATTACTAGAAGCCGAGCTTTCACTCTCCAGTAAAAGT
                      ____________________________________________________________
consensus GGTCCATCTTTTCCCTCGGCTGCATTACTAGAAGCCGAGCTTTCACTCTCCAGTAAAAGT
 
. : . : . : . : . : . :
JMSF050E06+ TTCCCGGCTACAGCTGCCAACAACTCAAACGCACAAATTTGCTTATCATCCACATTTCCG
JMFS053C10+ TTCCCGGCTACAGCTGACAACAACTCAAACGCACAAATTTGCTTATCATCCACATTTCCG
JMFF045O20+ TTCCCGGCTACAGCTGCCAACAACTCAAACGCACAAATTTGCTTATCATCCACATTTCCG
                      ____________________________________________________________
consensus TTCCCGGCTACAGCTGCCAACAACTCAAACGCACAAATTTGCTTATCATCCACATTTCCG
 
. : . : . : . : . : . :
JMSF050E06+ GTATGCCTCCTTCTAGACGATC
JMFS053C10+ GTATGCCTCCTTCTAGACGATCTAGGAGCCCGAGGCACAGCAGGAAACCGGTAGCCATCG
JMFF045O20+ GTATGCCTCCTTCTAGACGATCTAGGAGCCCGAGGCACAGCAGGAAACCGGTAGCCATCG
                      ____________________________________________________________
consensus GTATGCCTCCTTCTAGACGATCTAGGAGCCCGAGGCACAGCAGGAAACCGGTAGCCATCG
 
. : . : . : . : . : . :
JMFS053C10+ AAACCATACTCCAGCCTCTTTTTCATCACCATATCTTAAGCACCATGCCACTATCAACAC
JMFF045O20+ AAACCATACTCCAGCCTCTTTTTCATCACCATATCTTAAGCACCATGCCACTATCAACAC
                      ____________________________________________________________
consensus AAACCATACTCCAGCCTCTTTTTCATCACCATATCTTAAGCACCATGCCACTATCAACAC
 
. : . : . : . : . : . :
JMFS053C10+ AATCCACTGATATGAAGAAATCTATACTACTGTACAAATTGTTGGAACGCTGCGTACAAT
JMFF045O20+ AATCCACTGATATGAAGAAATCTATACTACTGTACAAATTGTTGGAACGCTGCGTACAAT
                      ____________________________________________________________
consensus AATCCACTGATATGAAGAAATCTATACTACTGTACAAATTGTTGGAACGCTGCGTACAAT
 
. : . : . : . : . : . :
JMFS053C10+ CCAACCAACAAACACCCCC
JMFF045O20+ CCAACCAACAAACCCCCCCXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTTCTTTTTTTTT
                      ____________________________________________________________
consensus CCAACCAACAAACCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTCTTTTTTTTT
 
. : . : . : . : . : . :
JMFF045O20+ TTACCCTTTTGTGAGAATGACGAAAAGAAGGCAAAGAAAAAGAATGGGTTACACTATTTC
                      ____________________________________________________________
consensus TTACCCTTTTGTGAGAATGACGAAAAGAAGGCAAAGAAAAAGAATGGGTTACACTATTTC
 
. : . : . : . : . : . :
JMSF038F24+ TGAGGATAGGAACGAAAAACCTCTGGGTTTGGAAAAAGAAAAAC
JMFF045O20+ CTACGTGAAATGAAGTTGAGGATAGGAACGAAAAACCTCTGGGTTTGGAAAAAGAAAAAC
                      ____________________________________________________________
consensus CTACGTGAAATGAAGTTGAGGATAGGAACGAAAAACCTCTGGGTTTGGAAAAAGAAAAAC
 
. : . : . : . : . : . :
JMSF038F24+ ACTGCTAAAACCCCTTCTTCTCTCTCTCTCTCTCTCCTCTNTTGCCCACACT
JMFF045O20+ ACTGCTAAAACCCCTTCTTCTCTCTCTCTCTCTCTCCTCTCTTGCCCACACTGTACGATC
                      ____________________________________________________________
consensus ACTGCTAAAACCCCTTCTTCTCTCTCTCTCTCTCTCCTCTCTTGCCCACACTGTACGATC