Contig 012968:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044H24Sequence641012968 (2)ref|XP_006479929.1|2e-87PREDICTED: thiamine pyrophosphokinase 1-like isoform X1 [Citrus sinensis]611012968 (2)ref|XP_008451594.1|2e-62PREDICTED: thiamine pyrophosphokinase 1 isoform X3 [Cucumis melo]

Alignment

This contig is upended


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rJMFF044H24-              GGTATTGTAAAATTTTTAGCAAATTACAAACTTACTTGGACAAGAGTACTGTGTAC
                      ____________________________________________________________
consensus                 GGTATTGTAAAATTTTTAGCAAATTACAAACTTACTTGGACAAGAGTACTGTGTAC
 
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rJMFF044H24-          ACGTAAATGGACTAATACAAAGACTATATTCCTTAACTAAAGAAATATTACAATAATTGT
                      ____________________________________________________________
consensus             ACGTAAATGGACTAATACAAAGACTATATTCCTTAACTAAAGAAATATTACAATAATTGT
 
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rJMFF044H24-          TCAAATGCTCCATCTTAAAGGGACAAAACAATGATACGGAGAATCCAAAAAGTGTTGATT
                      ____________________________________________________________
consensus             TCAAATGCTCCATCTTAAAGGGACAAAACAATGATACGGAGAATCCAAAAAGTGTTGATT
 
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rJMFF044H24-          AGTATTAAAGCCAAGGTGATTGTTAAAGCATCCTCAGCAAAGGTCTTACATGTTGTATAC
                      ____________________________________________________________
consensus             AGTATTAAAGCCAAGGTGATTGTTAAAGCATCCTCAGCAAAGGTCTTACATGTTGTATAC
 
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rJMFF044H24-          CTCATGGCTTTTTGATAGAGATTGTCCAAAGAAGATTAGATTCCGATTGCACAGTAACTA
                      ____________________________________________________________
consensus             CTCATGGCTTTTTGATAGAGATTGTCCAAAGAAGATTAGATTCCGATTGCACAGTAACTA
 
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rJMFF044H24-          CATCTTCTTGGACAATATTTGAGGTGCTGATTAGACTGCCAAACCTCATTTCAGTATTAG
                      ____________________________________________________________
consensus             CATCTTCTTGGACAATATTTGAGGTGCTGATTAGACTGCCAAACCTCATTTCAGTATTAG
 
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rJMFF044H24-          CTAGATTCCACTTGAGCCCAGTGGTTGTGGTTCTCCCAGAAGGCATTCCAATGGGAATGA
                      ____________________________________________________________
consensus             CTAGATTCCACTTGAGCCCAGTGGTTGTGGTTCTCCCAGAAGGCATTCCAATGGGAATGA
 
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rJMFF044H24-          GACCACAATGTGGGCCTTCAAGAGAGGGGTGGATATGAATCTTATGGTGATGGGTATTTG
                      ____________________________________________________________
consensus             GACCACAATGTGGGCCTTCAAGAGAGGGGTGGATATGAATCTTATGGTGATGGGTATTTG
 
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rJMFF044H24-          GAAGAAGTTGGATGAGGCAATCATCAGATAGGAAAACTATTCTTGTTGTTGCAAATCGAT
JMFF044H24+                              ATCATCAGATAGGAAAACTATTCTTGTTGTTGCAAATCGAT
                      ____________________________________________________________
consensus             GAAGAAGTTGGATGAGGCAATCATCAGATAGGAAAACTATTCTTGTTGTTGCAAATCGAT
 
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rJMFF044H24-          AGAGAAGATTGATGTTTCCCATCTCATGGTCAAATCTTCCACCAAGCGCTCCAACAACAA
JMFF044H24+           AGAGAAGATTGATGTTTCCCATCTCATGGTCAAATCTTCCACCAAGCGCTCCAACAACAA
                      ____________________________________________________________
consensus             AGAGAAGATTGATGTTTCCCATCTCATGGTCAAATCTTCCACCAAGCGCTCCAACAACAA
 
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rJMFF044H24-          GAATGCACAAATTCG                                             
JMFF044H24+           GAATGCACAAATTCGTGGTTTTCATGTGAGATAAGTCATGAATATAAGCAACACATTTAT
                      ____________________________________________________________
consensus             GAATGCACAAATTCGTGGTTTTCATGTGAGATAAGTCATGAATATAAGCAACACATTTAT
 
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JMFF044H24+           GCAAATCTGTGGTGTCTTGATCATGAGATTCATCTACAACTTNTGAGCCGAGGCCAGTAT
                      ____________________________________________________________
consensus             GCAAATCTGTGGTGTCTTGATCATGAGATTCATCTACAACTTNTGAGCCGAGGCCAGTAT
 
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JMFF044H24+           AAAAGTCTCGAACTTCACTTCGGATTGAATCCATGTCCCCTTTTATGACATCTGGTGTGT
                      ____________________________________________________________
consensus             AAAAGTCTCGAACTTCACTTCGGATTGAATCCATGTCCCCTTTTATGACATCTGGTGTGT
 
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JMFF044H24+           ACCTCTTGCGAACATCAGATGCGTCTTCATGAGGGAAGGCGTGAGGCAATTCATCATACA
                      ____________________________________________________________
consensus             ACCTCTTGCGAACATCAGATGCGTCTTCATGAGGGAAGGCGTGAGGCAATTCATCATACA
 
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JMFF044H24+           GTCTATTGGCTCCACCATCGGCGCAGACATGGAGCTGTGCTGCTTTCCAGAGCAGAGGAG
                      ____________________________________________________________
consensus             GTCTATTGGCTCCACCATCGGCGCAGACATGGAGCTGTGCTGCTTTCCAGAGCAGAGGAG
 
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JMFF044H24+           CGAATCGAGGGAGGCTTTGGTTGAGGACGACAAGTGCGTACGTTATAGCCGGGCCGTTGT
                      ____________________________________________________________
consensus             CGAATCGAGGGAGGCTTTGGTTGAGGACGACAAGTGCGTACGTTATAGCCGGGCCGTTGT
 
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JMFF044H24+           CGGCCGGAGGAGTCGGGAGGAGAAAGGAGGAGGAATGAGTCATTAGCTCCATACGCACTT
                      ____________________________________________________________
consensus             CGGCCGGAGGAGTCGGGAGGAGAAAGGAGGAGGAATGAGTCATTAGCTCCATACGCACTT
 
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JMFF044H24+           TTATCTTCTTCTTTTTTTCTTTTGCCGGTAAGGCGTTAGACTTATGTCGCCGGAATCCCC
                      ____________________________________________________________
consensus             TTATCTTCTTCTTTTTTTCTTTTGCCGGTAAGGCGTTAGACTTATGTCGCCGGAATCCCC
 
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JMFF044H24+           GCCGACGAATATTCACAGTTCACTATCAACGATTGAGATACGTGAAAGGTCACTGAGAAA
                      ____________________________________________________________
consensus             GCCGACGAATATTCACAGTTCACTATCAACGATTGAGATACGTGAAAGGTCACTGAGAAA