Contig 012964:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF044A08Sequence634012964 (2)ref|XP_009597044.1|176PREDICTED: uncharacterized protein LOC104093039 [Nicotiana tomentosiformis] ref|615012964 (2)ref|XP_009800022.1|6e-34PREDICTED: uncharacterized protein LOC104245999 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF044A08- ATTTTTTTTTTTAACACAACTTCTACATGGATTGCAACATAAC
                      ____________________________________________________________
consensus ATTTTTTTTTTTAACACAACTTCTACATGGATTGCAACATAAC
 
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rJMFF044A08- TTAATCTAACAGAACCAAAGCAATCTTGATTGGCGAAATGTTGAACTGAAAATATAAGGT
                      ____________________________________________________________
consensus TTAATCTAACAGAACCAAAGCAATCTTGATTGGCGAAATGTTGAACTGAAAATATAAGGT
 
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rJMFF044A08- TGTAACTAGTAGTGGAGGAGAAAAACATCCATTTTCACATGATGTTTGCATCCACTAATC
                      ____________________________________________________________
consensus TGTAACTAGTAGTGGAGGAGAAAAACATCCATTTTCACATGATGTTTGCATCCACTAATC
 
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rJMFF044A08- AAACGTAATTCTAACTAAAACTCTTCATTCCAAGTAAGCAGCTTTTCTATTTAGTCGCCT
                      ____________________________________________________________
consensus AAACGTAATTCTAACTAAAACTCTTCATTCCAAGTAAGCAGCTTTTCTATTTAGTCGCCT
 
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rJMFF044A08- CCATCTGGAGCTGCTTGCTCTTGAACAGCTTGCGCATCAGTCTCCATTTGCGTTGGAGAA
                      ____________________________________________________________
consensus CCATCTGGAGCTGCTTGCTCTTGAACAGCTTGCGCATCAGTCTCCATTTGCGTTGGAGAA
 
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rJMFF044A08- TCAGTTCCAGCATCCTTAGCAGCTTCTGTATCCGTATTCATTTCAGTTGGAGGAGGAGGC
JMFF044A08+ TTCAGTTGGAGGAGGAGGC
                      ____________________________________________________________
consensus TCAGTTCCAGCATCCTTAGCAGCTTCTGTATCCGTATTCATTTCAGTTGGAGGAGGAGGC
 
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rJMFF044A08- AAGACCTGGGTGATTGTTTCAATCAGCTCGTTAATAGTTTCTTCATTTTCCCCAAAGCGC
JMFF044A08+ AAGACCTGGGTGATTGTTTCAATCAGCTCGTTAATAGTTTCTTCATTTTCCCCAAAGCGC
                      ____________________________________________________________
consensus AAGACCTGGGTGATTGTTTCAATCAGCTCGTTAATAGTTTCTTCATTTTCCCCAAAGCGC
 
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rJMFF044A08- GTATCACATTCCTCAATAATCGTGTCAATTTCAACCAAAGAGGATGGCCTAATGTTGGTT
JMFF044A08+ GTATCACATTCCTCAATAATCGTGTCAATTTCAACCAAAGAGGATGGCCTAATGTTGGTT
                      ____________________________________________________________
consensus GTATCACATTCCTCAATAATCGTGTCAATTTCAACCAAAGAGGATGGCCTAATGTTGGTT
 
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rJMFF044A08- ATGTTCAATATCTCAGCTTTTGCAAGATTGAATTGTTTACATTTAGCTAAAAATTCTTCT
JMFF044A08+ ATGTTCAATATCTCAGCTTTTGCAAGATTGAATTGTTTACATTTAGCTAAAAATTCTTCT
                      ____________________________________________________________
consensus ATGTTCAATATCTCAGCTTTTGCAAGATTGAATTGTTTACATTTAGCTAAAAATTCTTCT
 
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rJMFF044A08- ATAATCTTTCTTGTCTGATTGCAAGCAGCAGTTCGCTCTAAGTAATCATAAACCTTGAAC
JMFF044A08+ ATAATCTTTCTTGTCTGATTGCAAGCAGCAGTTCGCTCTAAGTAATCATAAACCTTGAAC
                      ____________________________________________________________
consensus ATAATCTTTCTTGTCTGATTGCAAGCAGCAGTTCGCTCTAAGTAATCATAAACCTTGAAC
 
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rJMFF044A08- TCAGATGGTAAAACAGGAACCATGACCCTTGT
JMFF044A08+ TCAGATGGTAAAACAGGAACCATGACCCTTGTAGCATCATTTCCTGCACCTCTTGATCGT
                      ____________________________________________________________
consensus TCAGATGGTAAAACAGGAACCATGACCCTTGTAGCATCATTTCCTGCACCTCTTGATCGT
 
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JMFF044A08+ AGAAAGTCAAGCACCTCAAAGTTAGTAAGTGCACCGGCATTTGCTTCAAGAATCTTCATC
                      ____________________________________________________________
consensus AGAAAGTCAAGCACCTCAAAGTTAGTAAGTGCACCGGCATTTGCTTCAAGAATCTTCATC
 
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JMFF044A08+ CTCAGAAGCACAACGGTGAGCACACGGAGCTGTTATAACTTTAATCTTCAAATCAACATG
                      ____________________________________________________________
consensus CTCAGAAGCACAACGGTGAGCACACGGAGCTGTTATAACTTTAATCTTCAAATCAACATG
 
. : . : . : . : . : . :
JMFF044A08+ ACCGGCTACACCAGTGATCAAAGAAAACCAGAACTAGAACTTTAGATTTTTGTAACCCAA
                      ____________________________________________________________
consensus ACCGGCTACACCAGTGATCAAAGAAAACCAGAACTAGAACTTTAGATTTTTGTAACCCAA
 
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JMFF044A08+ TCAATACAAGGGAACTATTGAACCCCTGATGCCGCCGTCAGTGCTGCGGGAGTCGCAGGT
                      ____________________________________________________________
consensus TCAATACAAGGGAACTATTGAACCCCTGATGCCGCCGTCAGTGCTGCGGGAGTCGCAGGT
 
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JMFF044A08+ GGTCGAAAGTCGAAACCCGTCAGACCTCACTGTGTCTTCGGCTTTGAGGAATTAGAAATT
                      ____________________________________________________________
consensus GGTCGAAAGTCGAAACCCGTCAGACCTCACTGTGTCTTCGGCTTTGAGGAATTAGAAATT