Contig 012902:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028C13Sequence517012902 (2)emb|CDP01262.1|5e-56unnamed protein product [Coffea canephora]682004176 (2)ref|XP_008220386.1|1e-45PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Prunus mume]
JMFF051M06Sequence615012902 (2)emb|CDP01262.1|1e-77unnamed protein product [Coffea canephora]565004176 (2)ref|XP_008220386.1|5e-30PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Prunus mume]

Alignment

This contig is upended


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JMFF051M06+                                                        AGGAATTTGGATCCT
                      ____________________________________________________________
consensus                                                          AGGAATTTGGATCCT
 
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JMFF051M06+           ACCTGACTTGGATGCCCTTTTGCAGCCAAACCATACCGGAAATCATAGGGTGCTCCGAAC
                      ____________________________________________________________
consensus             ACCTGACTTGGATGCCCTTTTGCAGCCAAACCATACCGGAAATCATAGGGTGCTCCGAAC
 
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JMFF051M06+           ATGTTCTTGCCATCCTCGTACCNTAATTGCTCCAATGACTCCACTAATGGTGCCATGTAT
JMFF028C13+                                  TAATTGCTCCAATGACTCCACTAATGGTGCCATGTAT
                      ____________________________________________________________
consensus             ATGTTCTTGCCATCCTCGTACCNTAATTGCTCCAATGACTCCACTAATGGTGCCATGTAT
 
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JMFF051M06+           GCTGAAATGTGCTTGAGATTAGGATCAAGATAGAGAAGTGATTGGGTGGAGCCAAAGTTG
JMFF028C13+           GCTGAAATGTGCTTGAGATTAGGATCAAGATAGAGAAGTGATTGGGTGGAGCCAAAGTTG
                      ____________________________________________________________
consensus             GCTGAAATGTGCTTGAGATTAGGATCAAGATAGAGAAGTGATTGGGTGGAGCCAAAGTTG
 
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JMFF051M06+           GGCACTCGAGTTTCAACCCCAGGGGCATTATAGTAATCATCAAGATCAGAGTCATAGTAA
JMFF028C13+           GGCACTCGAGTTTCAACCCCAGGGGCATTATAGTAATCATCAAGATCAGAGTCATAGTAA
                      ____________________________________________________________
consensus             GGCACTCGAGTTTCAACCCCAGGGGCATTATAGTAATCATCAAGATCAGAGTCATAGTAA
 
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JMFF051M06+           AGCATCATCCTCTCACTGAAACACTTGGTGAGGGGAGACAAGAGGACACTGGAATCAAAC
JMFF028C13+           AGCATCATCCTCTCACTGAAACACTTGGTGAGGGGAGACAAGAGGACACTGGAATCAAAC
                      ____________________________________________________________
consensus             AGCATCATCCTCTCACTGAAACACTTGGTGAGGGGAGACAAGAGGACACTGGAATCAAAC
 
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JMFF051M06+           CACAGCCTGAACCAACCATCGCCATCTTTCTTGACTGGATACCACTTGCACCACAAGCTT
JMFF028C13+           CACAGCCTGAACCAACCATCGCCATCTTTCTTGACTGGATACCACTTGCACCACAAGCTT
                      ____________________________________________________________
consensus             CACAGCCTGAACCAACCATCGCCATCTTTCTTGACTGGATACCACTTGCACCACAAGCTT
 
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JMFF051M06+           GTAGGCTTGTACTTTGCAGTCAACCTTGCTTCTAGCTGGTTCCCGCCGTTCCCTGGGATC
JMFF028C13+           GTAGGCTTGTACTTTGCAGTCAACCTTGCTTCTAGCTGGTTCCCGCCGTTCCCTGGGATC
                      ____________________________________________________________
consensus             GTAGGCTTGTACTTTGCAGTCAACCTTGCTTCTAGCTGGTTCCCGCCGTTCCCTGGGATC
 
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JMFF051M06+           AGGATCAGAGGGTGGAGGTTGGTGGTGGCTTGACACGTGCACAGCATCACAGCCATTGAG
JMFF028C13+           AGGATCAGAGGGTGGAGGTTGGTGGTGGCTTGACACGTGCACAGCATCACAGCCATTGAG
                      ____________________________________________________________
consensus             AGGATCAGAGGGTGGAGGTTGGTGGTGGCTTGACACGTGCACAGCATCACAGCCATTGAG
 
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JMFF051M06+           ACCATGACGGCAACGACGGTGATGTCCAGGTAGTTCATGGGCCGGAAAGTGATGATCGGA
JMFF028C13+           ACCATGACGGCAACGACGGTGATGTCCAGGTAGTTCATGGGCCGGAAAGTGATGATCGGA
                      ____________________________________________________________
consensus             ACCATGACGGCAACGACGGTGATGTCCAGGTAGTTCATGGGCCGGAAAGTGATGATCGGA
 
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JMFF051M06+           GTTTGTTGGTGAGAGAAGAGGGGAAGAGAGCGGTGGCGTTTGGGGGCATGTTGGCTAGTC
JMFF028C13+           GTTTGTTGGTGAGAGAAGAGGGGAAGAGAGCGGTGGCGTTTGGGGGCATGTTGGCTAGTC
                      ____________________________________________________________
consensus             GTTTGTTGGTGAGAGAAGAGGGGAAGAGAGCGGTGGCGTTTGGGGGCATGTTGGCTAGTC