Contig 012897:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048K17-                                                       GAGAACGGGCAGGCCA
                      ____________________________________________________________
consensus                                                         GAGAACGGGCAGGCCA
 
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JMSF048K17-           GTAATAGCACCCCAAGCCCAGCCTTCAGGGTAAGACCAACCATTCCACCAACTTATTGCT
                      ____________________________________________________________
consensus             GTAATAGCACCCCAAGCCCAGCCTTCAGGGTAAGACCAACCATTCCACCAACTTATTGCT
 
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JMSF048K17-           CCCACTTGGGTTACAGGCTCACGCTACCAAGCCCAGCGAACAAAGCTTCTACCTACGGAC
                      ____________________________________________________________
consensus             CCCACTTGGGTTACAGGCTCACGCTACCAAGCCCAGCGAACAAAGCTTCTACCTACGGAC
 
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JMSF048K17-           TTATTAGAAGAAATGATCCTCATCTGATTCCGATGTGGGATTGTGCGAGGCTTTCGTGGG
rJMSF048K17+                                          ATGTGGGATTGTGCGAGGCTTTCGTGGG
                      ____________________________________________________________
consensus             TTATTAGAAGAAATGATCCTCATCTGATTCCGATGTGGGATTGTGCGAGGCTTTCGTGGG
 
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JMSF048K17-           GAAATATGAAGCAGAGAACTCTGATGTACTTGTGTTTATCTAGATCTCTCTCTCAATTCA
rJMSF048K17+          GAAATATGAAGCAGAGAACTCTGATGTACTTGTGTTTATCTAGATCTCTCTCTCAATTCA
                      ____________________________________________________________
consensus             GAAATATGAAGCAGAGAACTCTGATGTACTTGTGTTTATCTAGATCTCTCTCTCAATTCA
 
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JMSF048K17-           CTCTATGCTTTTCGCTCTCTTTCTTTTCTACTCGTTCAGCAATTTCCTCATTTCTGTGTT
rJMSF048K17+          CTCTATGCTTTTCGCTCTCTTTCTTTTCTACTCGTTCAGCAATTTCCTCATTTCTGTGTT
                      ____________________________________________________________
consensus             CTCTATGCTTTTCGCTCTCTTTCTTTTCTACTCGTTCAGCAATTTCCTCATTTCTGTGTT
 
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JMSF048K17-           CCCGTTTCCTTAATTTATGGAATTAGGGATATCCGCATAGGATATCTTGTTCACTTTCCA
rJMSF048K17+          CCCGTTTCCTTAATTTATGGAATTAGGGATATCCGCATAGGATATCTTGTTCACTTTCCA
                      ____________________________________________________________
consensus             CCCGTTTCCTTAATTTATGGAATTAGGGATATCCGCATAGGATATCTTGTTCACTTTCCA
 
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JMSF048K17-           CTGTGCTCTTTCCTGCAGCGCTTCGCATCGCAATGCAATTGGAGAGGTTGTAGACGGATA
rJMSF048K17+          CTGTGCTCTTTCCTGCAGCGCTTCGCATCGCAATGCAATTGGAGAGGTTGTAGACGGATA
                      ____________________________________________________________
consensus             CTGTGCTCTTTCCTGCAGCGCTTCGCATCGCAATGCAATTGGAGAGGTTGTAGACGGATA
 
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JMSF048K17-           TATATACATTTGTAAACGAGTATAAATATAGAAGCACTCTAACCGGAACGGAAGAATCGA
rJMSF048K17+          TATATACATTTGTAAACGAGTATAAATATAGAAGCACTCTAACCGGAACGGAAGAATCGA
rJMFF027I09+                                                           GGAAGAATCGA
JMFF027I09-                                                            GGAAGAATCGA
                      ____________________________________________________________
consensus             TATATACATTTGTAAACGAGTATAAATATAGAAGCACTCTAACCGGAACGGAAGAATCGA
 
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JMSF048K17-           GGAAGAAATTTGAGATTCAGCCATGAAAGACGACTACGAGAGTGAACAAAAGAAACAAGC
rJMSF048K17+          GGAAGAAATTTGAGATTCAGCCATGAAAGACGACTACGAGAGTGAACAAAAGAAACAAGC
rJMFF027I09+          GGAAGAAATTTGAGATTCAGCCATGAAAGACGACTACGAGAGTGAACAAAAGAAACAAGC
JMFF027I09-           GGAAGAAATTTGAGATTCAGCCATGAAAGACGACTACGAGAGTGAACAAAAGAAACAAGC
                      ____________________________________________________________
consensus             GGAAGAAATTTGAGATTCAGCCATGAAAGACGACTACGAGAGTGAACAAAAGAAACAAGC
 
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JMSF048K17-           TGCTGCAGATGTATTGTTTCAATATTCAAGGTTTGTCATGGCCTGTATTGGGAATCAAGT
rJMSF048K17+          TGCTGCAGATGTATTGTTTCAATATTCAAGGTTTGTCATGGCCTGTATTGGGAATCAAGT
rJMFF027I09+          TGCTGCAGATGTATTGTTTCAATATTCAAGGTTTGTCATGGCCTGTATTGGGAATCAAGT
JMFF027I09-           TGCTGCAGATGTATTGTTTCAATATTCAAGGTTTGTCATGGCCTGTATTGGGAATCAAGT
                      ____________________________________________________________
consensus             TGCTGCAGATGTATTGTTTCAATATTCAAGGTTTGTCATGGCCTGTATTGGGAATCAAGT
 
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JMSF048K17-           CCGGCCTTGTGACTTAAGAATGCACTTGATG                             
rJMSF048K17+          CCGGCCTTGTGACTTAAGAATGCACTTGATGAAGGAGGTTTCAGGCTTGCCAACAACTTT
rJMFF027I09+          CCGGCCTTGTGACTTAAGGATGCACTTGATGAAGGAGGTTTCAGGCTTGCCAACAACTTT
JMFF027I09-           CCGGCCTTGTGACTTAAGGATGCACTTGATGAAGGAGGTTTCAGGCTTGCCAACAACTTT
                      ____________________________________________________________
consensus             CCGGCCTTGTGACTTAAGGATGCACTTGATGAAGGAGGTTTCAGGCTTGCCAACAACTTT
 
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rJMSF048K17+          GAAGAGGGAGACCCATGTAGCGTCTTCTCCCGACATAATGGGGGAATCTTCAAGCTCGGG
rJMFF027I09+          GAAGAGGGAGACCCGTGTAGCATCTTCTCCCGACATAATGGGGGAATCTTCAAGCTCGGG
JMFF027I09-           GAAGAGGGAGACCCGTGTAGCATCTTCTCCCGACATAATGGGGGAATCTTCAAGCTCGGG
                      ____________________________________________________________
consensus             GAAGAGGGAGACCCGTGTAGCATCTTCTCCCGACATAATGGGGGAATCTTCAAGCTCGGG
 
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rJMSF048K17+          GACTTCCAGACTTGATAAAACCGATAGTTTCCGGGGTGTCTAGACTGGACAATAGTATCC
rJMFF027I09+          GACTTCCAGACTTGATAAAACCGATAGTTTCCGGGGTGTCTAGACTGGACAACAATATCC
JMFF027I09-           GACTTCCAGACTTGATAAAACCGATAGTTTCCGGGGTGTCTAGACTGGACAACAATATCC
                      ____________________________________________________________
consensus             GACTTCCAGACTTGATAAAACCGATAGTTTCCGGGGTGTCTAGACTGGACAACAATATCC
 
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rJMSF048K17+          TCATCTTTGTTTCAAAGTACCAATCTGGTTTCTTTGATCCCCCCACTTTGTAGCAGGACA
rJMFF027I09+          TCATCTTTGTTTCAAAGTACCAATCTGGTTCCTTTGATCCCCACACTATCTAGCAGGACA
JMFF027I09-           TCATCTTTGTTTCAAAGTACCAATCTGGTTCCTTTGATCCCCACACTATCTAGCAGGACA
                      ____________________________________________________________
consensus             TCATCTTTGTTTCAAAGTACCAATCTGGTTCCTTTGATCCCCACACTATCTAGCAGGACA
 
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rJMSF048K17+          TAAAAGTTGTCAATGTAAAGGGATATATTAGTGTCATCATCTGTTGGTAAAAATGATCCG
rJMFF027I09+          TAAAAGTTGTCAATGTAAAGGGATATATTAGTGTCATCCTCTGCTGTTAAAAATGATCCG
JMFF027I09-           TAAAAGTTGTCAATGTAAAGGGATATATTAGTGTCATCCTCTGCTGTTAAAAATGATCCG
                      ____________________________________________________________
consensus             TAAAAGTTGTCAATGTAAAGGGATATATTAGTGTCATCCTCTGCTGTTAAAAATGATCCG
 
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rJMSF048K17+          GTGTAAT                                                     
rJMFF027I09+          GTGTAATTCGTACGGTGTAATTCGTACGATTTCATT                        
JMFF027I09-           GTGTAATTCGTACGGTGTAATTCGTACGATTTCATTTTATATGCATTCAGATTGAGATTG
                      ____________________________________________________________
consensus             GTGTAATTCGTACGGTGTAATTCGTACGATTTCATTTTATATGCATTCAGATTGAGATTG