Contig 012893:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026I09Sequence604012893 (2)ref|XP_006346360.1|1e-60PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum tuberosum]713020203ref|XP_006346360.1|2e-104PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum tuberosum]
JMFF041O02Sequence632012893 (2)ref|XP_006346360.1|1e-63PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF041O02+ TGAAGTTTATAAGCACCTGAACAGGCATCCCT
JMFF026I09+ CCCT
                      ____________________________________________________________
consensus TGAAGTTTATAAGCACCTGAACAGGCATCCCT
 
. : . : . : . : . : . :
JMFF041O02+ GGGGGTTTATTGACAACAAGAATTGTAGGATCCTTGTATAATTCAATACTATGGAGAAAC
JMFF026I09+ GGGGGTTTATTGACAACAAGAATTGTAGGATCCTTGTATAATTCAATACTATGGAGAAAC
                      ____________________________________________________________
consensus GGGGGTTTATTGACAACAAGAATTGTAGGATCCTTGTATAATTCAATACTATGGAGAAAC
 
. : . : . : . : . : . :
JMFF041O02+ TCTCTTTGTTCTTCGCTATAAAGGTGCTCAACTTCTTTTTCAGCAGGGAACTTTTCAACA
JMFF026I09+ TCTCTTTGTTCTTCGCTATAAAGGTGCTCAACTTCTTTTTCAGCAGGGAACTTTTCAACA
                      ____________________________________________________________
consensus TCTCTTTGTTCTTCGCTATAAAGGTGCTCAACTTCTTTTTCAGCAGGGAACTTTTCAACA
 
. : . : . : . : . : . :
JMFF041O02+ GTTACAGGAAGTAATATTTGATCCCCAGTATTGATTAACTCTTTAGCATTGACCCTCCTG
JMFF026I09+ GTTACAGGAAGTAATATTTGATCCCCAGTATTGATTAACTCTTTAGCATTGACCCTCCTG
                      ____________________________________________________________
consensus GTTACAGGAAGTAATATTTGATCCCCAGTATTGATTAACTCTTTAGCATTGACCCTCCTG
 
. : . : . : . : . : . :
JMFF041O02+ CGTTGCGGTTCTTGGTCAGGAGAGGATACCCTTCGAACCTGTCTTAATCGAAACAATTTC
JMFF026I09+ CGTTGCGGTTCTTGGTCAGGAGAGGATACCCTTCGAACCTGTCTTAATCGAAACAATTTC
                      ____________________________________________________________
consensus CGTTGCGGTTCTTGGTCAGGAGAGGATACCCTTCGAACCTGTCTTAATCGAAACAATTTC
 
. : . : . : . : . : . :
JMFF041O02+ TGTACGAGAGACCTTGGCAACTCAGGGCAGCAATGCAGAACCCATTTCAGCGCCGTCATG
JMFF026I09+ TGTACGAGAGACCTTGGCAACTCAGGGCAGCAATGCAGAACCCATTTCAGCGCCGTCATG
                      ____________________________________________________________
consensus TGTACGAGAGACCTTGGCAACTCAGGGCAGCAATGCAGAACCCATTTCAGCGCCGTCATG
 
. : . : . : . : . : . :
JMFF041O02+ GTGGTGACAGTTTTCCCCATAGTATCTGATCGCCTTCCTGCGAGCTCTTTCCCAAGAGCA
JMFF026I09+ GTGGTGACAGTTTTCCCCATAGTATCTGATCGCCTTCCTGCGAGCTCTTTCCCAAGAGCA
                      ____________________________________________________________
consensus GTGGTGACAGTTTTCCCCATAGTATCTGATCGCCTTCCTGCGAGCTCTTTCCCAAGAGCA
 
. : . : . : . : . : . :
JMFF041O02+ GAACCATCTATAGAGGGAGTGTATGGAGGTAGAGTGAACCACTTGTCTTTCCTCTTCGCG
JMFF026I09+ GAACCATCTATAGAGGGAGTGTATGGAGGTAGAGTGAACCACTTGTCTTTCCTCTTCGCG
                      ____________________________________________________________
consensus GAACCATCTATAGAGGGAGTGTATGGAGGTAGAGTGAACCACTTGTCTTTCCTCTTCGCG
 
. : . : . : . : . : . :
JMFF041O02+ CTCTCGCCTTCTCTCTCCGCCCCAGCCTGGGCCATGGTAGTGGCACAGTGACATCGCCGG
JMFF026I09+ CTCTCGCCTTCTCTCTCCGCCCCAGCCTGGGCCATGGTAGTGGCACAGTGACATCGCCGG
                      ____________________________________________________________
consensus CTCTCGCCTTCTCTCTCCGCCCCAGCCTGGGCCATGGTAGTGGCACAGTGACATCGCCGG
 
. : . : . : . : . : . :
JMFF041O02+ AGGAAGAACCCTGAGCTTAACGAGTTCTCATCGCCGAGAACGGCGATAAACCGCCGGCAG
JMFF026I09+ AGGAAGAACCCTGAGCTTAACGAGTTCTCATCGCCGAGAACGGCGATAAACCGCCGGCAG
                      ____________________________________________________________
consensus AGGAAGAACCCTGAGCTTAACGAGTTCTCATCGCCGAGAACGGCGATAAACCGCCGGCAG
 
. : . : . : . : . : . :
JMFF041O02+ TAAACGGAAGCTTGGCGGAGGACAGAACGCTCCGCCATAGTTAAGAGTTTTGGGCTTTTT
JMFF026I09+ TAAACGGAAGCTTGGCGGAGGACAGAACGCTCCGCCATAGTTAAGAGTTTTGGGCTTTTT
                      ____________________________________________________________
consensus TAAACGGAAGCTTGGCGGAGGACAGAACGCTCCGCCATAGTTAAGAGTTTTGGGCTTTTT