Contig 012873:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019P02Sequence587012873 (2)ref|XP_009789370.1|4e-69PREDICTED: vesicle-associated membrane protein 714 isoform X2 [Nicotiana sylves664012873 (2)ref|XP_008449584.1|2e-53PREDICTED: vesicle-associated membrane protein 714 [Cucumis melo]

Alignment

This contig is upended


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rJMFF019P02-                                                  ATATGTACACACCTATAGAT
                      ____________________________________________________________
consensus                                                     ATATGTACACACCTATAGAT
 
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rJMFF019P02-          ACAAGTACTAATATTTTTTTTTTAAATAAATAAATAAATAAAAGCCCAACTTCAACACTT
                      ____________________________________________________________
consensus             ACAAGTACTAATATTTTTTTTTTAAATAAATAAATAAATAAAAGCCCAACTTCAACACTT
 
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rJMFF019P02-          GAGAGAGGCTACAAAGTACAAATTCAGAATTTACACAAGTTTCAAAANAAGCTTCAACCA
                      ____________________________________________________________
consensus             GAGAGAGGCTACAAAGTACAAATTCAGAATTTACACAAGTTTCAAAANAAGCTTCAACCA
 
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rJMFF019P02-          CAACACAGATCTTATCCACACTCAANAACAAAATTATTCTTCAACATCCTGTACCATCTC
                      ____________________________________________________________
consensus             CAACACAGATCTTATCCACACTCAANAACAAAATTATTCTTCAACATCCTGTACCATCTC
 
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rJMFF019P02-          CACACCCATGTCATCACAATCTAAACCAGCTGATATTCCCCGACTGTAAATATAGTCGAA
                      ____________________________________________________________
consensus             CACACCCATGTCATCACAATCTAAACCAGCTGATATTCCCCGACTGTAAATATAGTCGAA
 
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rJMFF019P02-          TCACAGGCAAGTGCCACCAACACAAATCTTTTTCGACAAATCATGATCTGCAGGATGATA
                      ____________________________________________________________
consensus             TCACAGGCAAGTGCCACCAACACAAATCTTTTTCGACAAATCATGATCTGCAGGATGATA
 
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rJMFF019P02-          NAGTAATGCCCCCACAGAATGCAGCGATTATCAAGTATAGGAGGAGTACAATTAAGCAAG
                      ____________________________________________________________
consensus             NAGTAATGCCCCCACAGAATGCAGCGATTATCAAGTATAGGAGGAGTACAATTAAGCAAG
 
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rJMFF019P02-          TCAGCAAGGCCATAAGCTTTGCATTTTTCATCCAAANAGCTCTTCTGAGGCGCTTTGACT
                      ____________________________________________________________
consensus             TCAGCAAGGCCATAAGCTTTGCATTTTTCATCCAAANAGCTCTTCTGAGGCGCTTTGACT
 
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rJMFF019P02-          GTTTCCTGAAGTGAAATGCACTGTCTTGCATGGTTGATGTTTTGTCAACAANAAGCTCAA
                      ____________________________________________________________
consensus             GTTTCCTGAAGTGAAATGCACTGTCTTGCATGGTTGATGTTTTGTCAACAANAAGCTCAA
 
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rJMFF019P02-          TCCGGTCACCTCTCTCAAGTATTTTCTCAATATTATCAACCATGATGGTATGTAGCTCAC
JMFF019P02+                        CTCAAGTATTTTCTCAATATTATCAACCATGATGGTATGTAGCTCAC
                      ____________________________________________________________
consensus             TCCGGTCACCTCTCTCAAGTATTTTCTCAATATTATCAACCATGATGGTATGTAGCTCAC
 
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rJMFF019P02-          CAACTTCCCCTCTAACACGACTAAATGTATCCGCGCTGGGGTTACTTGAATANAACTCCA
JMFF019P02+           CAACTTCCCCTNTAACACGACTAAATGTATCCGCGCTGGGGTTACTTGAATAGAACTCCA
                      ____________________________________________________________
consensus             CAACTTCCCCTCTAACACGACTAAATGTATCCGCGCTGGGGTTACTTGAATAGAACTCCA
 
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rJMFF019P02-          TTTGCTGATGTAAAACCCTTGANAATTCATCGTTCATGGCATAA                
JMFF019P02+           TTTGCTGATGTAAAACCCTTGAGAATTCATCGTTCATGGCATAAGCAGGTGCATGGGAAG
                      ____________________________________________________________
consensus             TTTGCTGATGTAAAACCCTTGAGAATTCATCGTTCATGGCATAAGCAGGTGCATGGGAAG
 
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JMFF019P02+           CAATCCTACCATAATTCTTCATGAACCGCATTTTGACATCCTCTAAATATGAGAATGGTA
                      ____________________________________________________________
consensus             CAATCCTACCATAATTCTTCATGAACCGCATTTTGACATCCTCTAAATATGAGAATGGTA
 
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JMFF019P02+           TCTGCCGAAGGTGTCGTTAGCCATACAGAGGAAGGTGAGGCCATCGGATCTGAGGATATG
                      ____________________________________________________________
consensus             TCTGCCGAAGGTGTCGTTAGCCATACAGAGGAAGGTGAGGCCATCGGATCTGAGGATATG
 
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JMFF019P02+           AAAGATGTATCGGTCCTGAGAGAAGCAGAGCCTCGACTCCGCTTCCTCCGGGAGCTTCTC
                      ____________________________________________________________
consensus             AAAGATGTATCGGTCCTGAGAGAAGCAGAGCCTCGACTCCGCTTCCTCCGGGAGCTTCTC
 
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JMFF019P02+           CAATATCCGCCGCGCAATCGCACCGGCGTTCCCCGTCACGGCGCTGAATTCCGCCAGCAC
                      ____________________________________________________________
consensus             CAATATCCGCCGCGCAATCGCACCGGCGTTCCCCGTCACGGCGCTGAATTCCGCCAGCAC
 
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JMFF019P02+           AGTCGTCCCCCTCGCCACCAGCGCATACAATATCGCCATCTCACCACTCCCACCACCGCA
                      ____________________________________________________________
consensus             AGTCGTCCCCCTCGCCACCAGCGCATACAATATCGCCATCTCACCACTCCCACCACCGCA
 
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JMFF019P02+           CCCCACCCCACCCCTCTCTCAATAACTGTATGTATCTGTGCGTGTAAACGTATATAACGG
                      ____________________________________________________________
consensus             CCCCACCCCACCCCTCTCTCAATAACTGTATGTATCTGTGCGTGTAAACGTATATAACGG
 
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JMFF019P02+           AGCTGTGTTCGGAGGATGGGTTTGGTGGGCAACGGCGAGCAGGCAGTGGCGGTGTCACCT
                      ____________________________________________________________
consensus             AGCTGTGTTCGGAGGATGGGTTTGGTGGGCAACGGCGAGCAGGCAGTGGCGGTGTCACCT