Contig 012872:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E01Sequence515012872 (2)emb|CDP07415.1|8e-28unnamed protein product [Coffea canephora]768008244 (2)emb|CAN84072.1|3e-120hypothetical protein VITISV_003982 [Vitis vinifera]
JMFF027O24Sequence486012872 (2)emb|CDP07415.1|5e-21unnamed protein product [Coffea canephora]758008244 (2)emb|CAN84072.1|1e-116hypothetical protein VITISV_003982 [Vitis vinifera]

Alignment

This contig is upended


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JMFF027O24+                                                               TGGTGAGC
JMFF019E01+                                    TCACATGGACCCACTCAACATCAATCTTGGTGAGC
                      ____________________________________________________________
consensus                                      TCACATGGACCCACTCAACATCAATCTTGGTGAGC
 
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JMFF027O24+           CGTACTTTGGGTAAAGACTCGGCCGCCGAAATGCGGGCAGCCCTTTGGCTCTCGGGCACC
JMFF019E01+           CGTACTTTGGGTAAAGACTCGGCCGCCGAAATGCGGGCAGCCCTTTGGCTCTCGGGCACC
                      ____________________________________________________________
consensus             CGTACTTTGGGTAAAGACTCGGCCGCCGAAATGCGGGCAGCCCTTTGGCTCTCGGGCACC
 
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JMFF027O24+           ACAAGATCCACCAAGCTTCCCCCATCAGGCTCAATCAAGGAACTCTTCACTACATTCGCG
JMFF019E01+           ACAAGATCCACCAAGCTTCCCCCATCAGGCTCAATCAAGGAACTCTTCACTACATTCGCG
                      ____________________________________________________________
consensus             ACAAGATCCACCAAGCTTCCCCCATCAGGCTCAATCAAGGAACTCTTCACTACATTCGCG
 
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JMFF027O24+           GAAGAATAAGAAGAAGGTAAAGAAGTCATCTTTCGAGGGCGAGAGAAGAGCAATGGAGAT
JMFF019E01+           GAAGAATAAGAAGAAGGTAAAGAAGTCATCTTTCGAGGGCGAGAGAAGAGCAATGGAGAT
                      ____________________________________________________________
consensus             GAAGAATAAGAAGAAGGTAAAGAAGTCATCTTTCGAGGGCGAGAGAAGAGCAATGGAGAT
 
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JMFF027O24+           AACGGGTTGGAATGGTAAACGGGTTTGGGATTAAATTTGGAGGCGTAACTGGCTGTCTTG
JMFF019E01+           AACGGGTTGGAATGGTAAACGGGTTTGGGATTAAATTTGGAGGCGTAACTGGCTGTCTTG
                      ____________________________________________________________
consensus             AACGGGTTGGAATGGTAAACGGGTTTGGGATTAAATTTGGAGGCGTAACTGGCTGTCTTG
 
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JMFF027O24+           GGTTTACTGCTATAAAGGTGGGCAGTGATGGTACTTGTGGTAAGGTGTAGTCTAATTGTA
JMFF019E01+           GGTTTACTGCTATAAAGGTGGGCAGTGATGGTACTTGTGGTAAGGTGTAGTCTAATTGTA
                      ____________________________________________________________
consensus             GGTTTACTGCTATAAAGGTGGGCAGTGATGGTACTTGTGGTAAGGTGTAGTCTAATTGTA
 
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JMFF027O24+           ACAGACATTTTTAGGTGATGAAGAATTGCTGCTTTGGGGTGTTCTTGGTTTTGCAGTTAA
JMFF019E01+           ACAGACATTTTTAGGTGATGAAGAATTGCTGCTTTGGGGTGTTCTTGGTTTTGCAGTTAA
                      ____________________________________________________________
consensus             ACAGACATTTTTAGGTGATGAAGAATTGCTGCTTTGGGGTGTTCTTGGTTTTGCAGTTAA
 
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JMFF027O24+           GGTTGTTAGAATGGAAGGCAAAGATCCTTGAAATATTGGATGGAGGCAAGGTAGCCGTGG
JMFF019E01+           GGTTGTTAGAATGGAAGGCAAAGATCCTTGAAATATTGGATGGAGGCAAGGTAGCCGTGG
                      ____________________________________________________________
consensus             GGTTGTTAGAATGGAAGGCAAAGATCCTTGAAATATTGGATGGAGGCAAGGTAGCCGTGG
 
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JMFF027O24+           CTCTGGGAAGAACAAAAGTGGTGGCGCTTAGGGAGCATTTGGTGGTGGACATCATTTT  
JMFF019E01+           CTCTGGGAAGAACAAAAGTGGTGGCGCTTAGGGAGCATTTGGTGGTGGACATCATTTTAC
                      ____________________________________________________________
consensus             CTCTGGGAAGAACAAAAGTGGTGGCGCTTAGGGAGCATTTGGTGGTGGACATCATTTTAC