Contig 012871:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018L05Sequence629012871 (2)gb|KDO66938.1|3e-20hypothetical protein CISIN_1g0427461mg, partial [Citrus sinensis]497012871 (2)ref|XP_009608853.1|1e-08PREDICTED: serine/threonine-protein kinase At3g07070-like isoform X1 [Nicotiana

Alignment

This contig is upended


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rJMFF018L05- GAGCAGGNGTATTAAGTACTCANTTAGTTAATAT
                      ____________________________________________________________
consensus GAGCAGGNGTATTAAGTACTCANTTAGTTAATAT
 
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rJMFF018L05- ATAGGTAGNGAAANAAAAAAATAGTACTCNTTACCGAGCAAANGTTCTGTAAAANAACCC
                      ____________________________________________________________
consensus ATAGGTAGNGAAANAAAAAAATAGTACTCNTTACCGAGCAAANGTTCTGTAAAANAACCC
 
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rJMFF018L05- ATAGGCAAGTATTCNTACNCCAAAAGTCTCTGTTCTCCNTTGACGCAATACCCGATTAAA
                      ____________________________________________________________
consensus ATAGGCAAGTATTCNTACNCCAAAAGTCTCTGTTCTCCNTTGACGCAATACCCGATTAAA
 
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rJMFF018L05- TTTACCAAATNGGGGNGGTTAAGGANAGTTANCGTTANAACTTCNACANANAACTCCTTG
JMFF018L05+ AACTCCTTG
                      ____________________________________________________________
consensus TTTACCAAATNGGGGNGGTTAAGGANAGTTANCGTTANAACTTCNACANANAACTCCTTG
 
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rJMFF018L05- CTCANCTTCCTTGNGNACCCGNCCTATCTAGTTGTTTCATANCCAGGACCGNGGGAGGAC
JMFF018L05+ CTCAGCTTCCTTGTGTACCCGTCCTATCTAGTTGTTTCATAGCCAGGACCGTGGGAGGAC
                      ____________________________________________________________
consensus CTCAGCTTCCTTGTGTACCCGTCCTATCTAGTTGTTTCATAGCCAGGACCGTGGGAGGAC
 
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rJMFF018L05- TGCGCCGCCGCCGCCGCCNATACANTCTGCCNAATCCGTTACTCCAACNAGTTGCTTTAN
JMFF018L05+ TGCGCCGCCGCCGCCGCCGATACACTCTGCCGAATCCGTTACTCCAACGAGTTGCTTTAA
                      ____________________________________________________________
consensus TGCGCCGCCGCCGCCGCCGATACACTCTGCCGAATCCGTTACTCCAACGAGTTGCTTTAA
 
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rJMFF018L05- TTCCCAACTCAGTCNTCGGAATTATGCCGCGATTTCCTATCCAAGNGCCTGCAACNANAT
JMFF018L05+ TTCCCAACTCAGTCATCGGAATTATGCCGCGATTTCCTATCCAAGTGCCTGCAACGAGAT
                      ____________________________________________________________
consensus TTCCCAACTCAGTCATCGGAATTATGCCGCGATTTCCTATCCAAGTGCCTGCAACGAGAT
 
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rJMFF018L05- TTGAAAAAGCGATGAANCTCCNATCAGTTGCTACCCCACCCATTCGTTTCACTGTTCCCT
JMFF018L05+ TTGAAGAAGCGATGAAGCTCCGATCAGTTGCTACCCCACCCATTCGTTTCACTGTTCCCT
                      ____________________________________________________________
consensus TTGAAGAAGCGATGAAGCTCCGATCAGTTGCTACCCCACCCATTCGTTTCACTGTTCCCT
 
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rJMFF018L05- CCGCCANATTCCCTCNCCGTTGTCGCCTTCCCCTCTCCCTGCT
JMFF018L05+ CCGCCAGATTCCCTCGCCGTTGTCGCCTTCCCCTCTCCCTGCTGAGTGCTGGACTGGTTC
                      ____________________________________________________________
consensus CCGCCAGATTCCCTCGCCGTTGTCGCCTTCCCCTCTCCCTGCTGAGTGCTGGACTGGTTC
 
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JMFF018L05+ AACTCGGACTCCGATTCCGATACCGAGGATTACGGAGAAACCGTTAGCTTCTCGGCAAAG
                      ____________________________________________________________
consensus AACTCGGACTCCGATTCCGATACCGAGGATTACGGAGAAACCGTTAGCTTCTCGGCAAAG
 
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JMFF018L05+ GAGAGCATCGGGAAATTAGCTTTGGGAATAAGTTCAGATTGGGAGGGATCAGATGGCGGC
                      ____________________________________________________________
consensus GAGAGCATCGGGAAATTAGCTTTGGGAATAAGTTCAGATTGGGAGGGATCAGATGGCGGC
 
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JMFF018L05+ TGGGTGAGTGGGTGGTGGTTCGTGAATGATCATTGACTCGTCGGAATATCCAAATTTTAC
                      ____________________________________________________________
consensus TGGGTGAGTGGGTGGTGGTTCGTGAATGATCATTGACTCGTCGGAATATCCAAATTTTAC
 
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JMFF018L05+ GAGGACAGAAGGGGAAATCAGCAGTTCGAAAAACTGAAACGAGAATGAAGATGAAATATT
                      ____________________________________________________________
consensus GAGGACAGAAGGGGAAATCAGCAGTTCGAAAAACTGAAACGAGAATGAAGATGAAATATT