Contig 012851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013C13Sequence472012851 (2)ref|XP_009619441.1|1e-40PREDICTED: protein REVERSION-TO-ETHYLENE SENSITIVITY1-like [Nicotiana tomentosi699012851 (2)ref|XP_007012271.1|2e-87Uncharacterized protein isoform 1 [Theobroma cacao] ref|XP_007012272.1| Uncharac

Alignment

This contig is upended


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rJMFF013C13-                             ATTTTCCTAAGTGCTGATGATGATAAGAGATTTCTGAGTTC
                      ____________________________________________________________
consensus                                ATTTTCCTAAGTGCTGATGATGATAAGAGATTTCTGAGTTC
 
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rJMFF013C13-          AGCATTTGTATGGTACCACTTGAGAGTAATTTTTGTTGTTTCAGCAAGGGGATTACAAGT
                      ____________________________________________________________
consensus             AGCATTTGTATGGTACCACTTGAGAGTAATTTTTGTTGTTTCAGCAAGGGGATTACAAGT
 
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rJMFF013C13-          TGGGGTTTTCCTCAGTATAATCTTGACATAATTGTTAGAAGACACAAGATTTTAGCATTC
                      ____________________________________________________________
consensus             TGGGGTTTTCCTCAGTATAATCTTGACATAATTGTTAGAAGACACAAGATTTTAGCATTC
 
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rJMFF013C13-          CAAAAGGTTTTTGACAAAGTATGTACCCACAAGAAACCATCCAAGAATGAGCAGCGAAAA
                      ____________________________________________________________
consensus             CAAAAGGTTTTTGACAAAGTATGTACCCACAAGAAACCATCCAAGAATGAGCAGCGAAAA
 
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rJMFF013C13-          TGAAAACAGGGCGATGAAAAAGGGCCATCCCACCATTAAAATACCCAGGGATAGTACAAA
                      ____________________________________________________________
consensus             TGAAAACAGGGCGATGAAAAAGGGCCATCCCACCATTAAAATACCCAGGGATAGTACAAA
 
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rJMFF013C13-          CACGAAAGGGAAAAATGACCTCAAGATGGAAAGGCCGTCGACCCAGTGCCCCTTGAGCAA
                      ____________________________________________________________
consensus             CACGAAAGGGAAAAATGACCTCAAGATGGAAAGGCCGTCGACCCAGTGCCCCTTGAGCAA
 
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rJMFF013C13-          TATAAGAGCTGCAATGTTAATCATGTTCCAATCCATTGACCCACCGTAGCTCATCCTGTT
                      ____________________________________________________________
consensus             TATAAGAGCTGCAATGTTAATCATGTTCCAATCCATTGACCCACCGTAGCTCATCCTGTT
 
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rJMFF013C13-          CAAGCAGTTTGCAGCAAACGAGTGGCTGTTGCACGTGAATAGATTGAACGATCTATGCTC
                      ____________________________________________________________
consensus             CAAGCAGTTTGCAGCAAACGAGTGGCTGTTGCACGTGAATAGATTGAACGATCTATGCTC
 
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rJMFF013C13-          AAAGTGGCGGATACTGGAGTGGATGGCATCATCCCAACTAATCGCAGTTCCAAACTCGGC
                      ____________________________________________________________
consensus             AAAGTGGCGGATACTGGAGTGGATGGCATCATCCCAACTAATCGCAGTTCCAAACTCGGC
 
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rJMFF013C13-          ATGTTTATAGCGTTGTGTGCACGAATGCCCAGCGAGGTTTGGAGGAAAACAGCACTGCTC
                      ____________________________________________________________
consensus             ATGTTTATAGCGTTGTGTGCACGAATGCCCAGCGAGGTTTGGAGGAAAACAGCACTGCTC
 
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rJMFF013C13-          TCTGTCTAGTTGAAGGTATTTAGCCACAGCACCATATGGAAAATCATTAACATTGACAAA
JMFF013C13+                   GTTGAAGGTATTTAGCCACAGCACCATATGGAAAATCATTAACATTGACAAA
                      ____________________________________________________________
consensus             TCTGTCTAGTTGAAGGTATTTAGCCACAGCACCATATGGAAAATCATTAACATTGACAAA
 
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rJMFF013C13-          GCTGGATCCCGAAAAGTTTATTACAGCGCCATCCTCCCTGCACAATCCAACATGACCA  
JMFF013C13+           GCTGGATCCCGAAAAGTTTATTACAGCGCCATCCTCCCTGCACAATCCAACATGACCAAT
                      ____________________________________________________________
consensus             GCTGGATCCCGAAAAGTTTATTACAGCGCCATCCTCCCTGCACAATCCAACATGACCAAT
 
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JMFF013C13+           GAAAGGAGCCAACCACGAGACCACCGGGAGGGGTGTCCAAACCAAACAACACGGGAACTT
                      ____________________________________________________________
consensus             GAAAGGAGCCAACCACGAGACCACCGGGAGGGGTGTCCAAACCAAACAACACGGGAACTT
 
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JMFF013C13+           TGCGTTCTTTGGATCTATTTCATCAAGCGGCCACAGCTCATCCTTGATCCCTTGCTCGAT
                      ____________________________________________________________
consensus             TGCGTTCTTTGGATCTATTTCATCAAGCGGCCACAGCTCATCCTTGATCCCTTGCTCGAT
 
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JMFF013C13+           ACCTTTATTCTCCACACTATTGGCAGGTTTTAGATCCATCAGAGAGTCTTCCCTAGAGGA
                      ____________________________________________________________
consensus             ACCTTTATTCTCCACACTATTGGCAGGTTTTAGATCCATCAGAGAGTCTTCCCTAGAGGA
 
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JMFF013C13+           GTAGAGGTATATGGCAGGCGGGCAGGCCTTAGAACTTGCATTCACTCAAAGTTCCCAATC
                      ____________________________________________________________
consensus             GTAGAGGTATATGGCAGGCGGGCAGGCCTTAGAACTTGCATTCACTCAAAGTTCCCAATC
 
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JMFF013C13+           TGGAGTGTGCCAGTGTGGAGAGAAATGGTGATCGGTTTGGTCTAAGGAGATGAAGCAAAA
                      ____________________________________________________________
consensus             TGGAGTGTGCCAGTGTGGAGAGAAATGGTGATCGGTTTGGTCTAAGGAGATGAAGCAAAA
 
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JMFF013C13+           GAAGCTGGAACAGCTGAGAAAGAAACAGCTCCAAACAACGTTTTCGAGGATGTTAATGTC
                      ____________________________________________________________
consensus             GAAGCTGGAACAGCTGAGAAAGAAACAGCTCCAAACAACGTTTTCGAGGATGTTAATGTC