Contig 012849:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M15Sequence277012849 (5)679002605 (3)ref|XP_010252987.1|2e-93PREDICTED: BTB/POZ domain-containing protein At1g55760-like [Nelumbo nucifera]
JMFF025E02Sequence544012849 (5)emb|CBI39826.3|3e-28unnamed protein product [Vitis vinifera]688002605 (3)ref|XP_009777616.1|3e-81PREDICTED: BTB/POZ domain-containing protein At1g55760 [Nicotiana sylvestris]
JMFF028J23Sequence507012849 (5)gb|KJB63095.1|4e-21hypothetical protein B456_009G453000 [Gossypium raimondii]679002605 (3)ref|XP_010252987.1|1e-91PREDICTED: BTB/POZ domain-containing protein At1g55760-like [Nelumbo nucifera]
JMSF043L15Sequence796012849 (5)emb|CDO96782.1|1e-64unnamed protein product [Coffea canephora]830018313ref|XP_002530617.1|1e-04DNA-damage inducible protein ddi1, putative [Ricinus communis] gb|EEF31760.1| DN
JMSF051O09Sequence662012849 (5)emb|CDO96782.1|2e-39unnamed protein product [Coffea canephora]725018360ref|XP_006367778.1|215PREDICTED: uncharacterized protein LOC102592908 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF043L15+                              ATTCGACCCATTTCGTAAACATCACACCCAACTAAATTTCC
                      ____________________________________________________________
consensus                                ATTCGACCCATTTCGTAAACATCACACCCAACTAAATTTCC
 
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JMSF043L15+           CACTTCCTCCATGGACAACGCTTTCAAATCCTTCCTCATGACAATGTAAGAGCATGCACC
                      ____________________________________________________________
consensus             CACTTCCTCCATGGACAACGCTTTCAAATCCTTCCTCATGACAATGTAAGAGCATGCACC
 
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JMSF043L15+           AACAAGCACAGAAAACCATCTCCCTTGACCATATTCACCTTCAGTGATTTTCTCAATCAT
JMSF051O09+                                            TTCACATTCAGTGATTTTCTCAATCAT
                      ____________________________________________________________
consensus             AACAAGCACAGAAAACCATCTCCCTTGACCATATTCACCTTCAGTGATTTTCTCAATCAT
 
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JMSF043L15+           ATGTTTAACCTCACTTGATTTTGTCGCTGAAAACCCTAACTTATACATCAAATCATCAAT
JMSF051O09+           ATGTTTAACCTCACTTGATTTTGTCGCTGAAAACCCTAACTTATACATCAAATCATCAAT
                      ____________________________________________________________
consensus             ATGTTTAACCTCACTTGATTTTGTCGCTGAAAACCCTAACTTATACATCAAATCATCAAT
 
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JMSF043L15+           CACCTTCTGTGCTTCATAAATCTTAGTCTCTTTATAACTATAAAGGCTTCCATTGCCCAC
JMSF051O09+           CACCTTCTGTGCTTCATAAATCTTAGTCTCTTTATAACTATAAAGGCTTCCATTGCCCAC
                      ____________________________________________________________
consensus             CACCTTCTGTGCTTCATAAATCTTAGTCTCTTTATAACTATAAAGGCTTCCATTGCCCAC
 
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JMSF043L15+           AGTTCCAACACGAACATATGTACCAACCGGACCATTAATGCCCCCAATATGAGCCTGGAA
JMSF051O09+           AGTTCCAACACGAACATATGTACCAACCGGACCATTAATGCCCCCAATATGAGCCTGGAA
                      ____________________________________________________________
consensus             AGTTCCAACACGAACATATGTACCAACCGGACCATTAATGCCCCCAATATGAGCCTGGAA
 
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JMSF043L15+           ATTGTCAAAATCCTGAACAACGCCGCAAGATGTGCAAACCGAATTGCCGGTGTCATGGTC
JMSF051O09+           ATTGTCAAAATCCTGAACAACGCCGCAAGATGTGCAAACCGAATTGCCGGTGTCATGGTC
                      ____________________________________________________________
consensus             ATTGTCAAAATCCTGAACAACGCCGCAAGATGTGCAAACCGAATTGCCGGTGTCATGGTC
 
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JMSF043L15+           CGTGACAATAGCTTTCCCTCTAGCACCACAACTCTTGCAGACACGAGAACCCTCCATATT
JMSF051O09+           CGTGACAATAGCTTTCCCTCTAGCACCACAACTCTTGCAGACACGAGAACCCTCCATATT
                      ____________________________________________________________
consensus             CGTGACAATAGCTTTCCCTCTAGCACCACAACTCTTGCAGACACGAGAACCCTCCATATT
 
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JMSF043L15+           CTGATCAGATATTCTGAAATTATGTAATAGAAGTTCTCTAATTCCTAGCAAAAATAATTT
JMSF051O09+           CTGATCAGATATTCTGAAATTATGTAATAGAAGTTCTCTAATTCCTAGCAAAAATAATTT
                      ____________________________________________________________
consensus             CTGATCAGATATTCTGAAATTATGTAATAGAAGTTCTCTAATTCCTAGCAAAAATAATTT
 
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JMSF043L15+           AAGAAAAAAGGGTTGAATATCTAAGAAAGGATTAAGGCAATGAATCAACAAAAAAATGAT
JMSF051O09+           AAGAAAAAAGGGTTGAATATCTAAGAAAGGATTAAGGCAATGAATCAACAAAAAAATGAT
                      ____________________________________________________________
consensus             AAGAAAAAAGGGTTGAATATCTAAGAAAGGATTAAGGCAATGAATCAACAAAAAAATGAT
 
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JMSF043L15+           AAAGCGAAACTTCACGCTAGAAAGTTTATGAGTGATATATGAGCTGGGGTTTTCATGGAT
JMSF051O09+           AAAGCGAAACTTCACGCTAGAAAGTTTATGAGTGATATATGAGCTGGGGTTTTCATGGAT
JMFF028J23+                                                             TTTCATGGAT
JMFF025E02+                                                             TTTCATGGAT
                      ____________________________________________________________
consensus             AAAGCGAAACTTCACGCTAGAAAGTTTATGAGTGATATATGAGCTGGGGTTTTCATGGAT
 
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JMSF043L15+           GCAATCGAAAATCCCCTCCAACGTTACCTCTCCGTGCTTTCCCAGG              
JMSF051O09+           GCAATCGAAAATCCCCTCCAACGTTACCTCTCCGTGCTTTCCCAGG              
JMFF028J23+           GCAATCGAAGATCCCCTCCAACGTTAGCTCTCCGTGCTTTCCCAGGATTGCGAGTTTCTG
JMFF025E02+           GCAATCGAAGATCCCCTCCAACGTTAGCTCTCCGTGCTTTCCCAGGATTGCGAGTTTCTG
                      ____________________________________________________________
consensus             GCAATCGAAGATCCCCTCCAACGTTAGCTCTCCGTGCTTTCCCAGGATTGCGAGTTTCTG
 
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JMFF028J23+           GTACACGAACCCTTCTCGCCTGAAAACACCTCATATATCTTCACACAAACGCAGGCACAG
JMFF025E02+           GTACACGAACCCTTCTCGCCTGAAAACACCTCANATATCTTCACACAAACGCAGGCACAG
JMFF011M15+                                  AAACACCTCATATATCTTCACACAAACGCAGGCACAG
                      ____________________________________________________________
consensus             GTACACGAACCCTTCTCGCCTGAAAACACCTCATATATCTTCACACAAACGCAGGCACAG
 
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JMFF028J23+           ACACACTCCACTCCGGGTATTAAAAAAGGGGGAAAAAACACTCAGAGAGAAACCTTAAAA
JMFF025E02+           ACACACTCCACTCCGGGTATTAAAAAAGGGGGAAAAAACACTCAGAGAGAAACCTTAAAA
JMFF011M15+           ACACACTCCACTCCGGGTATTAAAAAAGGGGGAAAAAACACTCAGAGAGAAACCTTAAAA
                      ____________________________________________________________
consensus             ACACACTCCACTCCGGGTATTAAAAAAGGGGGAAAAAACACTCAGAGAGAAACCTTAAAA
 
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JMFF028J23+           TAAGCAAATCGTGGGGATTCTGTTGAGCGGATGAGCCAAATGGGTTTCGGGCACGCAAAG
JMFF025E02+           TAAGCAAATCGTGGGGATTCTGTTGAGCGGATGAGCCAAATGGGTTTCGGGCACGCAAAG
JMFF011M15+           TAAGCAAATCGTGGGGATTCTGTTGAGCGGATGAGCCAAATGGGTTTCGGGCACGCAAAG
                      ____________________________________________________________
consensus             TAAGCAAATCGTGGGGATTCTGTTGAGCGGATGAGCCAAATGGGTTTCGGGCACGCAAAG
 
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JMFF028J23+           GGTATTTGTTGTTGTGAATGCTTTACGCCATTGATGGTGAAATTTTGGAGGTTTTGTTTT
JMFF025E02+           GGTATTTGTTGTTGTGAATGCTTTACGCCATTGATGGTGAAATTTTGGAGGTTTTGTTTT
JMFF011M15+           GGTATTTGTTGTTGTGAATGCTTTACGCCATTGATGGTGAAATTTTGGAGGTTTTGTTTT
                      ____________________________________________________________
consensus             GGTATTTGTTGTTGTGAATGCTTTACGCCATTGATGGTGAAATTTTGGAGGTTTTGTTTT
 
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JMFF028J23+           TGTTTATCTTCTCTGCTCATTTGTTGGCTTACACT                         
JMFF025E02+           TGTTTATCTTCTCTGCTCATTTGTTGGCTTACACT                         
JMFF011M15+           TGTTTATCTTCTCTGCTCATTTGTTGGCTTACACTGCACTTCAGAGGCTGATGGCAATAC
                      ____________________________________________________________
consensus             TGTTTATCTTCTCTGCTCATTTGTTGGCTTACACTGCACTTCAGAGGCTGATGGCAATAC