Contig 012845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010P06Sequence594012845 (6)gb|ABB54381.2|1e-93FVE [Ipomoea nil]776005724 (6)gb|KCW53598.1|1e-112hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMFF041E02Sequence644012845 (6)ref|XP_010242216.1|4e-113PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]614005724 (6)ref|XP_009762754.1|3e-71PREDICTED: WD-40 repeat-containing protein MSI4-like, partial [Nicotiana sylves
JMFF046K13Sequence618012845 (6)ref|XP_008228297.1|6e-111PREDICTED: WD-40 repeat-containing protein MSI4-like [Prunus mume]535005724 (6)gb|KCW53598.1|4e-54hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMFF049E05Sequence529012845 (6)gb|ABB54381.2|4e-93FVE [Ipomoea nil]540005724 (6)gb|KCW53598.1|2e-43hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMSF030J04Sequence654012845 (6)ref|XP_010242216.1|7e-115PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]738005724 (6)gb|KCW53598.1|3e-80hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]
JMSF034K08Sequence676012845 (6)ref|XP_010242216.1|3e-124PREDICTED: WD-40 repeat-containing protein MSI4-like [Nelumbo nucifera]782005724 (6)gb|KCW53598.1|3e-115hypothetical protein EUGRSUZ_J02866 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF046K13+ CAAGTGCAAATTCAGCATA
JMSF034K08+ TCCCTCCAGATAGCACAAAGGGCTCCGTTGGGCACATGGCAAGTGCAAATTCAGCATT
JMFF041E02+ CAAGTGCAAATTCAGCATT
JMSF030J04+ CAAGTGCAAATTCAGCATT
                      ____________________________________________________________
consensus TCCCTCCAGATAGCACAAAGGGCTCCGTTGGGCACATGGCAAGTGCAAATTCAGCATT
 
. : . : . : . : . : . :
JMFF046K13+ TTCTGNATGACCTGTCAACACCAAGTCTGGCTAGAGTNCAGAGGCTCCCAAAACAGCATG
JMSF034K08+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
JMFF041E02+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
JMSF030J04+ ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
                      ____________________________________________________________
consensus ATCTTGATGACCTGTCAACACCAAGTCTGGCTTAGAGTCAGAGGCTCCCAAAACAGCATG
 
. : . : . : . : . : . :
JMFF046K13+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMSF034K08+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMFF049E05+ TAGGCTGAGACTCAACATCCCAGATGAGACCATCCGGACTGTCAGTGTGTGTGGC
JMFF041E02+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMSF030J04+ TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
JMFF010P06+ AGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
                      ____________________________________________________________
consensus TCGACTAGGCTGAGACTCAACATCCCAGATGAGAACATCCGGACTGTCAGTGTGTGTGGC
 
. : . : . : . : . : . :
JMFF046K13+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMSF034K08+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF049E05+ CACTATCTGGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF041E02+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMSF030J04+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
JMFF010P06+ CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
                      ____________________________________________________________
consensus CACTATCTTGCTATTCTGAGGCAATTCCCTGATTCGGTTAACCTCGCCAGGATGTATGAT
 
. : . : . : . : . : . :
JMFF046K13+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMSF034K08+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF049E05+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF041E02+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMSF030J04+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
JMFF010P06+ TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
                      ____________________________________________________________
consensus TGTTTTGTGCTTCTTTACAAAAGGAGATCGGGCCTCTTCATTGAACTGTGAGATGTGCTC
 
. : . : . : . : . : . :
JMFF046K13+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMSF034K08+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF049E05+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF041E02+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMSF030J04+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
JMFF010P06+ TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
                      ____________________________________________________________
consensus TGCAGCTGCAACCCTAGGTTTTACAACTTCACAATTTGCAATCACAAGTGTATTTGGAAC
 
. : . : . : . : . : . :
JMFF046K13+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMSF034K08+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF049E05+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF041E02+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMSF030J04+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
JMFF010P06+ ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
                      ____________________________________________________________
consensus ACTACCATCAGTCTGCTCAGAGAGGTAGAGCCGTTGGCGATTCTTGTAAGTTGCTTGCTC
 
. : . : . : . : . : . :
JMFF046K13+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMSF034K08+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF049E05+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF041E02+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMSF030J04+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
JMFF010P06+ CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
                      ____________________________________________________________
consensus CACTTGTGGCCCCCACCTGCAGGAAAGAGATGGCCATACAAGATTGTGGTTAGCAAGCCA
 
. : . : . : . : . : . :
JMFF046K13+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMSF034K08+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF049E05+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF041E02+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMSF030J04+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
JMFF010P06+ GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
                      ____________________________________________________________
consensus GTCATAGAGAACGGGAACTAGAGACTTCCACTGTGTGTAGCGCTCGTTAACCGACGGCTG
 
. : . : . : . : . : . :
JMFF046K13+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMSF034K08+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF049E05+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF041E02+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMSF030J04+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
JMFF010P06+ ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
                      ____________________________________________________________
consensus ACCCCCTTTTCCGGTTCTCTCCTTCATCTTCTCCCCCTGGCCCTCCCTGGATTGCAATCT
 
. : . : . : . : . : . :
JMFF046K13+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCT
JMSF034K08+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMFF049E05+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCT
JMFF041E02+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMSF030J04+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
JMFF010P06+ CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
                      ____________________________________________________________
consensus CTCTCTCTCCGGAACTTTCTCCCACAGTCTCGCTTTTGGATTTCCCGCGTTGCTCAAGCG
 
. : . : . : . : . : . :
JMSF034K08+ CAAACCACTGCTACGCT
JMFF041E02+ CAAACCACTGCTACGCT
JMSF030J04+ CAAACCACTGCTACGCTGCCCTTCC
JMFF010P06+ CAAACCACTGCTACGCTGCCCTTCCACTTAGGTACTTGTGGCCTTTTCCCCCGGTATATC
                      ____________________________________________________________
consensus CAAACCACTGCTACGCTGCCCTTCCACTTAGGTACTTGTGGCCTTTTCCCCCGGTATATC