Contig 012836:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P17Sequence438012836 (6)ref|XP_009797474.1|2e-51PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana sylvest740001035 (4)gb|AGQ56866.1|3e-96omega-3 fatty acid desaturase [Camellia sinensis]
JMFF008G24Sequence459012836 (6)gb|AIA22325.1|4e-16fatty acid desaturase 7 [Nicotiana tabacum]735001035 (4)emb|CDP14009.1|5e-97unnamed protein product [Coffea canephora]
JMFF028O15Sequence465012836 (6)ref|XP_009797474.1|6e-45PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana sylvest
JMFS144D04Sequence619012836 (6)ref|XP_009797474.1|8e-81PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana sylvest
JMSF002C09Sequence274012836 (6)758001035 (4)ref|XP_004506769.1|2e-108PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Cicer arietinum]
JMSF034I21Sequence667012836 (6)ref|XP_009797474.1|3e-90PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like [Nicotiana sylvest641001035 (4)gb|AGQ56866.1|3e-89omega-3 fatty acid desaturase [Camellia sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS144D04+ GCCAGCAACACTAT
JMSF034I21+ ATCCATGGTAAGGGACAAGAATTGAAGAATGGAGGAGATGGCCAGCAACACTAT
                      ____________________________________________________________
consensus ATCCATGGTAAGGGACAAGAATTGAAGAATGGAGGAGATGGCCAGCAACACTAT
 
. : . : . : . : . : . :
JMFS144D04+ TCAGCTTTGGGTCATTAGAAAAGCTTCCATGGCCACAGTCATGGCCAAGAACAAAGAGAG
JMSF034I21+ TCAGCTTTGGGTCATTAGAAAAGCTTCCATGGCCACAGTCATGGCCAAGAACAAAGAGAG
                      ____________________________________________________________
consensus TCAGCTTTGGGTCATTAGAAAAGCTTCCATGGCCACAGTCATGGCCAAGAACAAAGAGAG
 
. : . : . : . : . : . :
JMFS144D04+ CCCAGAACATGGTTCCTTGAGCCAACCAATACAGAGGCCAAACAATCCAGTTATTAAGAG
JMFF005P17+ TATTAAGAG
JMSF034I21+ CCCAGAACATGGTTCCTTGAGCCAACCAATACAGAGGCCAAACAATCCAGTTATTAAGAG
                      ____________________________________________________________
consensus CCCAGAACATGGTTCCTTGAGCCAACCAATACAGAGGCCAAACAATCCAGTTATTAAGAG
 
. : . : . : . : . : . :
JMFS144D04+ AAGCAGCCATAGCTGCCAATCCAAACACAATTGCAACATCCCTAACCACAAAGCTCATGG
JMFF028O15+ CAATTGCAACATCCCTAACCACAAAGCTCATGG
JMFF005P17+ AAGCAGCCATAGCTGCCAATCCAAACACAATTGCAACATCCCTAACCACAAAGCTCATGG
JMSF034I21+ AAGCAGCCATAGCTGCCAATCCAAACACAATTGCAACATCCCTAACCACAAAGCTCATGG
                      ____________________________________________________________
consensus AAGCAGCCATAGCTGCCAATCCAAACACAATTGCAACATCCCTAACCACAAAGCTCATGG
 
. : . : . : . : . : . :
JMFS144D04+ ACTTCCAAGGGTTCTTCACCCAGCAATGCTTAGGAATGGCTGCTTTGATATCAGACAGCT
JMFF028O15+ ACTTCCAAGGGTTCTTCACCCAGCAATGCTTAGGAATGGCTGCTTTGATATCAGACAGCT
JMFF005P17+ ACTTCCAAGGGTTCTTCACCCAGCAATGCTTAGGAATGGCTGCTTTGATATCAGACAGCT
JMSF034I21+ ACTTCCAAGGGTTCTTCACCCAGCAATGCTTAGGAATGGCTGCTTTGATATCAGACAGCT
                      ____________________________________________________________
consensus ACTTCCAAGGGTTCTTCACCCAGCAATGCTTAGGAATGGCTGCTTTGATATCAGACAGCT
 
. : . : . : . : . : . :
JMFS144D04+ TAAATGGCGGCGGTGCTCCAGGGTCAAAAAACTCAACCCCACCCCCATTGACGCTATTGA
JMFF028O15+ TAAATGGCGGCGGTGCTCCAGGGTCAAAAAACTCAACCCCACCCCCATTGACGCTATTGA
JMFF005P17+ TAAATGGCGGCGGTGCTCCAGGGTCAAAAAACTCAACCCCACCCCCATTGACGCTATTGA
JMSF034I21+ TAAATGGCGGCGGTGCTCCAGGGTCAAAAAACTCAACCCCACCCCCATTGACGCTATTGA
                      ____________________________________________________________
consensus TAAATGGCGGCGGTGCTCCAGGGTCAAAAAACTCAACCCCACCCCCATTGACGCTATTGA
 
. : . : . : . : . : . :
JMFS144D04+ TTCTCTCCCTCTCTTCTTCCTCTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
JMFF028O15+ TTCTCTCCCTCTCTTCTTCCTCTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
JMFF005P17+ TTCTCTCCCTCTCTTCTTCCTCTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
JMSF034I21+ TTCTCTCCCTCTCTTCTTCCTCTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
JMFF008G24+ CTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
                      ____________________________________________________________
consensus TTCTCTCCCTCTCTTCTTCCTCTTCCTCCCCAACTGAGGGGACCCTCACCGGGGCACTCA
 
. : . : . : . : . : . :
JMFS144D04+ CCCTCAATGCCCAGCTCCTCTCTCTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
JMFF028O15+ CCCTCAATGCCCAGCTCCTCTCTCTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
JMFF005P17+ CCCTCAATGCCCAGCTCCTCTCTCTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
JMSF034I21+ CCCTCAATGCCCAGCTCCTCTCTCTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
JMFF008G24+ CCCTCAATGCCCAGCTCCTCTCTNTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
                      ____________________________________________________________
consensus CCCTCAATGCCCAGCTCCTCTCTCTAATCCCAATCAACGAACAAGAACCCAGATCTGTTC
 
. : . : . : . : . : . :
JMFS144D04+ CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
JMFF028O15+ CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
JMFF005P17+ CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
JMSF034I21+ CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
JMFF008G24+ CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
                      ____________________________________________________________
consensus CTGAAACTGTCACCCTTGAGGGGCTGCCACAACTGAGAGAACCCATCCCAGTTCTTGGCT
 
. : . : . : . : . : . :
JMFS144D04+ TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
JMFF028O15+ TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
JMFF005P17+ TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
JMSF034I21+ TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
JMSF002C09+ CGGAGACCACATTCTGATAACACCCAACTCGCCATTA
JMFF008G24+ TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
                      ____________________________________________________________
consensus TAGGGTAGATTTTGGGGAATGGTCGGAGACCACATTCTGATAACACCCAACTCGCCATTA
 
. : . : . : . : . : . :
JMFS144D04+ GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
JMFF028O15+ GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
JMFF005P17+ GAGGACGTT
JMSF034I21+ GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
JMSF002C09+ GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
JMFF008G24+ GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
                      ____________________________________________________________
consensus GAGGACGTTAGGGACAGAAAGGTAGAACCTTTGAACTCTGGGCCTCTTCCAATTCAAGAG
 
. : . : . : . : . : . :
JMFS144D04+ AGAAA
JMFF028O15+ AGAAACAGAATT
JMSF034I21+ AGAAACAGAATT
JMSF002C09+ AGAAACAGAATTGTGGCCTCAAAGACCACACAACAGGATATGTAAGTATTGAAGCCGAAA
JMFF008G24+ AGAAACAGAATTGTGGCCTCAAAGACCACACAACAGGATATGTAAGTATTGAAGCCGAAA
                      ____________________________________________________________
consensus AGAAACAGAATTGTGGCCTCAAAGACCACACAACAGGATATGTAAGTATTGAAGCCGAAA
 
. : . : . : . : . : . :
JMSF002C09+ TCTTGACCAATCAAGAATGGGCTTGTGGTGGGGTTAAGAGGAAGGAGGATGAGGAGATAA
JMFF008G24+ TCTTGACCAATCAAGAATGGGCTTGTGGTGGGGTTAAGAGGAAGGAGGATGAGGAGATAA
                      ____________________________________________________________
consensus TCTTGACCAATCAAGAATGGGCTTGTGGTGGGGTTAAGAGGAAGGAGGATGAGGAGATAA
 
. : . : . : . : . : . :
JMSF002C09+ CACTAGGGAAAGGGATTCTCTCCTTCAATTGCAGCGTCAGAAACCCCAACTTGTG
JMFF008G24+ CACTAGGGAAAGGGATTCTCTCCTTCAATTGCAGCGTCAGAAACCCCAACTTGTGTGGTT
                      ____________________________________________________________
consensus CACTAGGGAAAGGGATTCTCTCCTTCAATTGCAGCGTCAGAAACCCCAACTTGTGTGGTT