| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008F04 | Sequence | 631 | 012834 (8) | ref|XP_010315371.1| | 4e-51 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Solanum lycopersicum] | 756 | 012834 (8) | ref|XP_010315371.1| | 5e-97 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Solanum lycopersicum] |
| JMFF036G15 | Sequence | 588 | 012834 (8) | ref|XP_010315371.1| | 8e-51 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Solanum lycopersicum] | 743 | 012834 (8) | ref|XP_006359677.1| | 2e-112 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4-like [Solanum tuberosum] |
| JMFF045P24 | Sequence | 637 | 012834 (8) | ref|XP_010315371.1| | 3e-60 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Solanum lycopersicum] | 602 | 012834 (8) | ref|XP_010315371.1| | 9e-72 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Solanum lycopersicum] |
| JMSF025C10 | Sequence | 705 | 012834 (8) | ref|XP_006359677.1| | 2e-72 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4-like [Solanum tuberosum] | 776 | 012834 (8) | ref|XP_006359677.1| | 5e-113 | PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF008F04- GTGATTTATCATATTCTGCTGTTA
____________________________________________________________
consensus GTGATTTATCATATTCTGCTGTTA
. : . : . : . : . : . :
rJMFF045P24- GCTCTCAAACGAAAACATCAGTCATTCAAGTGGAATTTGAACA
rJMFF008F04- ATATCNAACTGTTCTCTGCTCTCAAACGAAAACATCAGTCATTCAAGTGGAATTTGAACA
rJMFF036G15- AGTGGAATTTGAACA
____________________________________________________________
consensus ATATCNAACTGTTCTCTGCTCTCAAACGAAAACATCAGTCATTCAAGTGGAATTTGAACA
. : . : . : . : . : . :
rJMFF045P24- TATCAATCCATTAAACAGAAATATACACACAATTAGTGAATAGAATTAAAAAACAATAAT
rJMFF008F04- TATCAATCCATTAAACAGAAATATACACACAATTAGTGAATAGAATTAAAAAACAATAAT
rJMFF036G15- TATCAATCCATTAAACAGAAATATACACACAATTAGTGAATAGAATTAAAAAACAATAAT
rJMSF025C10- TTAGTGAATAGAATTAAAAAACAATAAT
____________________________________________________________
consensus TATCAATCCATTAAACAGAAATATACACACAATTAGTGAATAGAATTAAAAAACAATAAT
. : . : . : . : . : . :
rJMFF045P24- GGCTTCCCAAATTGATGGTTAAAGAGTCCAATACTAGACTTCATAATTAGCTTACTACTA
rJMFF008F04- GGCTTCCCAAATTGATGGTTAAAGAGTCCAATACTAGACTTCATAATTAGCTTACTACTA
rJMFF036G15- GGCTTCCCAAATTGATGGTTAAAGAGTCCAATACTAGACTTCATAATTAGCTTACTACTA
rJMSF025C10- GGCTTCCCAAATTGATGGTTAAAGAGTCCAATACTAGACTTCATAATTAGCTTACTACTA
____________________________________________________________
consensus GGCTTCCCAAATTGATGGTTAAAGAGTCCAATACTAGACTTCATAATTAGCTTACTACTA
. : . : . : . : . : . :
rJMFF045P24- AAGAGATGGCATCACATTCCCAAAGTGAAGCCAATCTCCGCTGGTGTATAATACTTACGT
rJMFF008F04- AAGAGATGGCATCACATTCCCAAAGTGAAGCCAATCTCCGCTGGTGTATAATACTTACGT
rJMFF036G15- AAGAGATGGCATCACATTCCCAAAGTGAAGCCAATCTCCGCTGGTGTATAATACTTACGT
rJMSF025C10- AAGAGATGGCATCACATTCCCAAAGTGAAGCCAATCTCCGCTGGTGTATAATACTTACGT
____________________________________________________________
consensus AAGAGATGGCATCACATTCCCAAAGTGAAGCCAATCTCCGCTGGTGTATAATACTTACGT
. : . : . : . : . : . :
rJMFF045P24- CGTTGAACTCCGATTATCCTCATCCCATTGGCTCTTAGGTATCTCTCCAGAATCAGCGAT
rJMFF008F04- CGTTGAACTCCGATTATCCTCATCCCATTGGCTCTTAGGTATCTCTCCAGAATCAGCGAT
rJMFF036G15- CGTTGAACTCCGATTATCCTCATCCCATTGGCTCTTAGGTATCTCTCCAGAATCAGCGAT
rJMSF025C10- CGTTGAACTCCGATTATCCTCATCCCATTGGCTCTTAGGTATCTCTCCAGAATCAGCGAT
____________________________________________________________
consensus CGTTGAACTCCGATTATCCTCATCCCATTGGCTCTTAGGTATCTCTCCAGAATCAGCGAT
. : . : . : . : . : . :
rJMFF045P24- GATTACCTTCTTCCTAGGTTTTCCGCTGTAGGTTCCTGCCCCGCCCTCAACCGCATATAC
rJMFF008F04- GATTACCTTCTTCCTAGGTTTTCCGCTGTAGGTTCCTGCCCCGCCCTCAACCGCATATAC
rJMFF036G15- GATTACCTTCTTCCTAGGTTTTCCGCTGTAGGTTCCTGCCCCGCCCTCAACCGCATATAC
rJMSF025C10- GATTACCTTCTTCCTAGGTTTTCCGCTGTAGGTTCCTGCCCCGCCCTCAACCGCATATAC
____________________________________________________________
consensus GATTACCTTCTTCCTAGGTTTTCCGCTGTAGGTTCCTGCCCCGCCCTCAACCGCATATAC
. : . : . : . : . : . :
rJMFF045P24- AGTGTCCATGCCTTCGATAACTTTCCCAAAGACAACATGCTCCCCATCCAACCAGCTTGC
rJMFF008F04- AGTGTCCATGCCTTCGATAACTTTCCCAAAGACAACATGCTCCCCATCCAACCAGCTTGC
rJMFF036G15- AGTGTCCATGCCTTCGATAACTTTCCCAAAGACAACATGCTCCCCATCCAACCAGCTTGC
rJMSF025C10- AGTGTCCATGCCTTCGATAACTTTCCCAAAGACAACATGCTCCCCATCCAACCAGCTTGC
JMSF025C10+ CCCATCCAACCAGCTTGN
____________________________________________________________
consensus AGTGTCCATGCCTTCGATAACTTTCCCAAAGACAACATGCTCCCCATCCAACCAGCTTGC
. : . : . : . : . : . :
rJMFF045P24- CTTGACAGTTGTTATGAAAAACTGGCAGCCATTGGAATCACGTCCAAAGTTCACCATGGA
rJMFF008F04- CTTGACAGTTGTTATGAAAAACTGGCAGCCATTGGAATCACGTCCAAAGTTCACCATGGA
rJMFF036G15- CTTGACAGTTGTTATGAAAAACTGGCAGCCATTGGAATCACGTCCAAAGTTCACCATGGA
rJMSF025C10- CTTGACAGTTGTTATGAAAAACTGGCAGCCATTGGAATCACGTCCAAAGTTCACCATGGA
JMFF045P24+ CAAAGTTCACCATGGA
JMSF025C10+ CTTGACAGTTGTTATGAAAAACTGGCAGCCATNGGAATCACGTCCAAAGTTCACCATGGA
____________________________________________________________
consensus CTTGACAGTTGTTATGAAAAACTGGCAGCCATTGGAATCACGTCCAAAGTTCACCATGGA
. : . : . : . : . : . :
rJMFF045P24- AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
rJMFF008F04- AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
rJMFF036G15- AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
rJMSF025C10- AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
JMFF045P24+ AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
JMFF036G15+ ATTTTCATCAGGAAAGCTACCACCATA
JMSF025C10+ AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
JMFF008F04+ TGAGATTTTCATCAGGAAAGCTACCACCATA
____________________________________________________________
consensus AACGACACCTGGGTGGGAATGCCTAATCTTGAGATTTTCATCAGGAAAGCTACCACCATA
. : . : . : . : . : . :
rJMFF045P24- TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
rJMFF008F04- TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
rJMFF036G15- TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
rJMSF025C10- TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
JMFF045P24+ TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
JMFF036G15+ TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
JMSF025C10+ TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
JMFF008F04+ TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
____________________________________________________________
consensus TATGGAATCATTTCCCCTTCCATCACGATATGCAATATCTCCACCTTGAATCATGAACCC
. : . : . : . : . : . :
rJMFF045P24- AGGTATTATGCGATGAAAT
rJMFF008F04- AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
rJMFF036G15- AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
rJMSF025C10- AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
JMFF045P24+ AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
JMFF036G15+ AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
JMSF025C10+ AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
JMFF008F04+ AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
____________________________________________________________
consensus AGGTATTATGCGATGAAATGGTGTTCCTTTGTAATGAAGTGTAATACCATTAGCAGTCTT
. : . : . : . : . : . :
rJMFF008F04- CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGGTTTTGGCACAACTTTGCC
rJMFF036G15- CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
rJMSF025C10- CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
JMFF045P24+ CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
JMFF036G15+ CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
JMSF025C10+ CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
JMFF008F04+ CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
____________________________________________________________
consensus CCCCATCTCCCCTGTGCACAAAGCTCTGAAATTCTCCGTTGTTTTTGGCACAACTTTGCC
. : . : . : . : . : . :
rJMFF008F04- ATATAATCC
rJMFF036G15- ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
rJMSF025C10- ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
JMFF045P24+ ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
JMFF036G15+ ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
JMSF025C10+ ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
JMFF008F04+ ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
____________________________________________________________
consensus ATATAATCCAATAACAATTCTTCCTACACGCTGCTTATCTATATCAACATCCAAAAATAC
. : . : . : . : . : . :
rJMFF036G15- TCTATGGG
rJMSF025C10- TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTG-AATGAGGAGGA
JMFF045P24+ TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTGAAATGAGGAGGA
JMFF036G15+ TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTGAAATGAGGAGGA
JMSF025C10+ TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTGAAATGAGGAGGA
JMFF008F04+ TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTGAAATGAGGAGGA
____________________________________________________________
consensus TCTATGGGTGACTTCAAACACCTCCTCCACCTTTTCTTCCTCCTGGTGAAATGAGGAGGA
. : . : . : . : . : . :
rJMSF025C10- AGCGAAATATATGAGAACCAAAGCGAGGA
JMFF045P24+ AGCGAAATATATGAGAACCAAAGCGAGGAGGAAGATGAGAAGGTAGCGTGGGCGCAGTAG
JMFF036G15+ AGCGAAATATATGAGAACCAAAGCGAGGAGGAAGATGAGAAGGTAGCGTGGGCGCAGTAG
JMSF025C10+ AGCGAAATATATGAGAACCAAAGCGAGGAGGAAGATGAGAAGGTAGCGTGGGCGCAGTAG
JMFF008F04+ AGCGAAATATATGAGAACCAAAGCGAGGAGGAAGATGAGAAGGTAGCGTGGGCGCAGTAG
____________________________________________________________
consensus AGCGAAATATATGAGAACCAAAGCGAGGAGGAAGATGAGAAGGTAGCGTGGGCGCAGTAG
. : . : . : . : . : . :
JMFF045P24+ AGCTGAGATCCCTCGACCCATCTCTTGGTTTCTTCTCTCAACCAGCATACATCAATTTCT
JMFF036G15+ AGCTGAGATCCCTCGACCCATCTCTTGGTTTCTTCTCTCAACCAGCATACATCAATTTCT
JMSF025C10+ AGCTGAGATCCCTCGACCCATCTCTTGGTTTCTTCTCTCAACCAGCATACATCAATTTCT
JMFF008F04+ AGCTGAGATCCCTCGACCCATCTCTTGGTTTCTTCTCTCAACCAGCATACATCAATTTCT
____________________________________________________________
consensus AGCTGAGATCCCTCGACCCATCTCTTGGTTTCTTCTCTCAACCAGCATACATCAATTTCT
. : . : . : . : . : . :
JMFF045P24+ CCCACTCAGTTGGGTCATCAATTAGCTCAAAGAATAAAAATGACAATGAAAATGAAAACA
JMFF036G15+ CCCACTCAGTTGGGTCATCAATTAGCTCAAAGAATAAAAATGACAATGAAAATGAAAACA
JMSF025C10+ CCCACTCAGTTGGGTCATCAATTAGCTCAAAGAATAAAAATGACAATGAAAATGAAAACA
JMFF008F04+ CCCACTCAGTTGGGTCATCAATTAGCTCAAAGAATAAAAATGACAATGAAAATGAAAACA
____________________________________________________________
consensus CCCACTCAGTTGGGTCATCAATTAGCTCAAAGAATAAAAATGACAATGAAAATGAAAACA
. : . : . : . : . : . :
JMFF045P24+ CATAATATAATGAGAACAGCGGAGAAGTGTCAGAGCAGTATCAGAGCATGAACATTTTCT
JMFF036G15+ CATAATATAATGAGAACAGCGGAGAAGTGTCAGAGCAGTATCAGAGCATGAACATTTTCT
JMSF025C10+ CATAATATAATGAGAACAGCGGAGAAGTGTCAGAGCAGTATCAGAGCATGAACATTTTCT
JMFF008F04+ CATAATATAATGAGAACAGCGGAGAAGTGTCAGAGCAGTATCAGAGCATGAACATTTTCT
____________________________________________________________
consensus CATAATATAATGAGAACAGCGGAGAAGTGTCAGAGCAGTATCAGAGCATGAACATTTTCT
. : . : . : . : . : . :
JMFF045P24+ TCTCCCCATCCATGGAATACT
JMFF036G15+ TCTCCCCATCCATGGAATACT
JMSF025C10+ TCTCCCCATCCATGGAATACT
JMFF008F04+ TCTCCCCATCCATGGAATACTGTTCCAATCTGTCGCTTCGATTGGGTTGCTACTTGCTAC
____________________________________________________________
consensus TCTCCCCATCCATGGAATACTGTTCCAATCTGTCGCTTCGATTGGGTTGCTACTTGCTAC