Contig 012830:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K13Sequence538012830 (2)emb|CDP19312.1|7e-69unnamed protein product [Coffea canephora]597012830 (2)ref|XP_009623453.1|2e-54PREDICTED: NAD(P)H:quinone oxidoreductase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF007K13-                                                                    TA
                      ____________________________________________________________
consensus                                                                       TA
 
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rJMFF007K13-          TGGAAACAAATCAGTCTAGTTTGTTCAAAAAAAACAAATGATGCACATTTCCTCCCTCAA
                      ____________________________________________________________
consensus             TGGAAACAAATCAGTCTAGTTTGTTCAAAAAAAACAAATGATGCACATTTCCTCCCTCAA
 
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rJMFF007K13-          GAAGATCATCAAAGTTAACAGGTACACTTTTAGGGGGCAATAAAAAAAAGGCACACTCTT
                      ____________________________________________________________
consensus             GAAGATCATCAAAGTTAACAGGTACACTTTTAGGGGGCAATAAAAAAAAGGCACACTCTT
 
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rJMFF007K13-          AGCCAAGAATTCATTCCAGCATTATTGAATATATTGATTCTCAACAAAGACATAGAAACT
                      ____________________________________________________________
consensus             AGCCAAGAATTCATTCCAGCATTATTGAATATATTGATTCTCAACAAAGACATAGAAACT
 
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rJMFF007K13-          AGATTTCATACAGACCAAGACCCACATCATTCGCACTTACCTTGGAGTCTCAGTGTAAAT
                      ____________________________________________________________
consensus             AGATTTCATACAGACCAAGACCCACATCATTCGCACTTACCTTGGAGTCTCAGTGTAAAT
 
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rJMFF007K13-          GCCTGCAAGGCTAAAAGAATAGCCTTTATTTTCTCCCTGGTATCAGCATCAACCAAGTCC
                      ____________________________________________________________
consensus             GCCTGCAAGGCTAAAAGAATAGCCTTTATTTTCTCCCTGGTATCAGCATCAACCAAGTCC
 
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rJMFF007K13-          CCATCACTGTTAAACTTGGAAGGAGGCTGGAAAGCATTAAGGAAAAATTCAGGCTTGTTA
                      ____________________________________________________________
consensus             CCATCACTGTTAAACTTGGAAGGAGGCTGGAAAGCATTAAGGAAAAATTCAGGCTTGTTA
 
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rJMFF007K13-          ATGAAATGAAGGTCGAGGTAGACGCCTATCTGCCGGAGGTGGTATTGTGATCGTCCCCCG
                      ____________________________________________________________
consensus             ATGAAATGAAGGTCGAGGTAGACGCCTATCTGCCGGAGGTGGTATTGTGATCGTCCCCCG
 
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rJMFF007K13-          CCAAAGCCGCCTCCAGCACTGATGATTGCAGCGGCTTTATCAGCCCAAACATTTGGGGGT
JMFF007K13+            CAAAGCCGCCTCCAGCACTGATGATTGCAGCGGCTTTATCAGCCCAAACATTTGGGGGT
                      ____________________________________________________________
consensus             CCAAAGCCGCCTCCAGCACTGATGATTGCAGCGGCTTTATCAGCCCAAACATTTGGGGGT
 
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rJMFF007K13-          CGAGATGCCCAATCAATTGCATTTTTTAACGGCCCAGTAACAGAATAATTGTACTCGGGG
JMFF007K13+           CGAGATGCCCAATCAATTGCATTTTTTAACGGCCCAGTAACAGAATAATTGTACTC-GGG
                      ____________________________________________________________
consensus             CGAGATGCCCAATCAATTGCATTTTTTAACGGCCCAGTAACAGAATAATTGTACTCGGGG
 
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rJMFF007K13-          GGAGGCAAATAGGACGCTGTCAGCTTGAAGAATCTTTT                      
JMFF007K13+           GGAGGCAAATAGGACGCTGTCAGCTTGAAGAATCTTTTGGCGAAACTCCTCAACAACCGG
                      ____________________________________________________________
consensus             GGAGGCAAATAGGACGCTGTCAGCTTGAAGAATCTTTTGGCGAAACTCCTCAACAACCGG
 
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JMFF007K13+           AGGGAAGGTTCCATCAACCTCAAGATCAGTGTTTAGAAATGGTAACGGCGATATATCCAC
                      ____________________________________________________________
consensus             AGGGAAGGTTCCATCAACCTCAAGATCAGTGTTTAGAAATGGTAACGGCGATATATCCAC
 
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JMFF007K13+           GTACTCTATATTCAACCCCTCGATTGATTCCTTGCTTATCTCCATAGCGGCGCGGAGGAG
                      ____________________________________________________________
consensus             GTACTCTATATTCAACCCCTCGATTGATTCCTTGCTTATCTCCATAGCGGCGCGGAGGAG
 
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JMFF007K13+           GCCGCGATTGTAGGAGCCTTTACGCAGAGAGCCGCAGAGGCCGACGACATTGACGATTGG
                      ____________________________________________________________
consensus             GCCGCGATTGTAGGAGCCTTTACGCAGAGAGCCGCAGAGGCCGACGACATTGACGATTGG
 
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JMFF007K13+           TTTGGTAGCCATAGCTGCAGCTTGCTTGCGAGCTTCCGTTCGTCGGTTAGCGTGTGAGGC
                      ____________________________________________________________
consensus             TTTGGTAGCCATAGCTGCAGCTTGCTTGCGAGCTTCCGTTCGTCGGTTAGCGTGTGAGGC
 
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JMFF007K13+           GGCGGAGCAGGCAGCCGGCGACGAGCTTGGAGGCAGTGAACAGTGGTCTTCGCCGGCGAC
                      ____________________________________________________________
consensus             GGCGGAGCAGGCAGCCGGCGACGAGCTTGGAGGCAGTGAACAGTGGTCTTCGCCGGCGAC
 
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JMFF007K13+           GTCGCGAGGAGCTTCAGCTTAGGAATTTGACGGAATTTCTCAATTTCTGTTGGATTTTTT
                      ____________________________________________________________
consensus             GTCGCGAGGAGCTTCAGCTTAGGAATTTGACGGAATTTCTCAATTTCTGTTGGATTTTTT