Contig 012827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006K21Sequence103012827 (3)772011224 (3)ref|XP_006363772.1|2e-98PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]
JMFF008A08Sequence549012827 (3)ref|XP_009618767.1|2e-53PREDICTED: metal tolerance protein C2 isoform X1 [Nicotiana tomentosiformis]716011224 (3)ref|XP_006363772.1|5e-88PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]
JMFF051E15Sequence615012827 (3)ref|XP_009618767.1|2e-59PREDICTED: metal tolerance protein C2 isoform X1 [Nicotiana tomentosiformis]540011224 (3)ref|XP_006363772.1|5e-33PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF051E15+                                          GCTTCCACAGCCAAAGAGAATGATAAAAC
                      ____________________________________________________________
consensus                                            GCTTCCACAGCCAAAGAGAATGATAAAAC
 
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JMFF051E15+           CAATAGAAATAGAGCATGGTGAAAGCAGATAAAACTTCTAGTCTCTTGTACCCATATGTG
JMFF008A08+                                                         TGTACCCATATGTG
                      ____________________________________________________________
consensus             CAATAGAAATAGAGCATGGTGAAAGCAGATAAAACTTCTAGTCTCTTGTACCCATATGTG
 
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JMFF051E15+           TAGGTGCGATCAGGCTTGTTTCTGGAAACAGCTATTGCAAACAATGAAAATGTTAAAAGG
JMFF008A08+           TAGGTGCGATCAGGCTTTGTTCTGGAAACAGCTATTGCAAACAATGAAAATGTTAAAAGG
                      ____________________________________________________________
consensus             TAGGTGCGATCAGGCTTTTTTCTGGAAACAGCTATTGCAAACAATGAAAATGTTAAAAGG
 
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JMFF051E15+           CCACAGCCAAATGTCAAGTGAAATGCATCAGAAACAAGACCTACTCGGCCAGAGAAAAGG
JMFF008A08+           CCACAGCCAAATGTCAAGTGAAATGCATCAGAAACAAGACCTACTCGGCCAGAGAAAAGG
                      ____________________________________________________________
consensus             CCACAGCCAAATGTCAAGTGAAATGCATCAGAAACAAGACCTACTCGGCCAGAGAAAAGG
 
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JMFF051E15+           CCAACGAAGAACTCGACGGTAGAATAAGCTACATTGAGTGAAATCAACGCGAATAACCTC
JMFF008A08+           CCAACGAAGAACTCGACGGTAGAATAAGCTACATTGAGTGAAATCAACGCGAATAACCTC
                      ____________________________________________________________
consensus             CCAACGAAGAACTCGACGGTAGAATAAGCTACATTGAGTGAAATCAACGCGAATAACCTC
 
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JMFF051E15+           CTCATCGGCTTGTTCCCTGACATGACGCCTCGATAAATGGCCGAGAGAAACGAAGAAGCA
JMFF008A08+           CTCATCGGCTTGTTCCCTGACATGACGCCTCGATAAATGGCCGAGAGAAACGAAGAAGCA
                      ____________________________________________________________
consensus             CTCATCGGCTTGTTCCCTGACATGACGCCTCGATAAATGGCCGAGAGAAACGAAGAAGCA
 
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JMFF051E15+           GAAAATTTCTCGTCAGAGATCTTCGAATCCTCCGAAATTTTGTCGAATGAATCTCGAGTA
JMFF008A08+           GAAAATTTCTCGTCAGAGATCTTCGAATCCTCCGAAATTTTGTCGAATGAATCTCGAGTA
                      ____________________________________________________________
consensus             GAAAATTTCTCGTCAGAGATCTTCGAATCCTCCGAAATTTTGTCGAATGAATCTCGAGTA
 
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JMFF051E15+           TAGATATCCGGTATATCGATGCTCGAAACGTTCCGCGTAAGAAGAGGCTTTGAGAAACTG
JMFF008A08+           TAGATATCCGGTATATCGATGCTCGAAACGTTCCGCGTAAGAAGAGGCTTTGAGAAACTG
                      ____________________________________________________________
consensus             TAGATATCCGGTATATCGATGCTCGAAACGTTCCGCGTAAGAAGAGGCTTTGAGAAACTG
 
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JMFF051E15+           CTCGATTGCTGAAACGATGCTTGCCGCGAAAATGCGAATCTTCGGTCGCTGCCGCCGAAA
JMFF008A08+           CTCGATTGCTGAAACGATGCTTGCCGCGAAAATGCGAATCTTCGGTCGCTGCCGCCGAAA
                      ____________________________________________________________
consensus             CTCGATTGCTGAAACGATGCTTGCCGCGAAAATGCGAATCTTCGGTCGCTGCCGCCGAAA
 
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JMFF051E15+           CCAATATCGCCGCCATTAGGCGGCGGCCTCGGCGACTCGGCCTCCACCTTCCGGTAATTA
JMFF008A08+           CCAATATCGCCGCCATTAGGCGGCGGCCTCGGCGACTCGGCCTCCACCTTCCGGTAATTA
JMFF006K21+                            AGGCGGCGGCCTCGGNGNCTCGGCCTCCNCCTTCCGGTAANTA
                      ____________________________________________________________
consensus             CCAATATCGCCGCCATTAGGCGGCGGCCTCGGCGACTCGGCCTCCACCTTCCGGTAATTA
 
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JMFF051E15+           AACCTCGAATCGTACTGTTCTGGAACTGTCTGACTTTCCATTTTAT              
JMFF008A08+           AACCTCGAATCGTACTGTTCTGGAACTGTCTGACTTTCCATTTTATTGTAAAATC     
JMFF006K21+           AACCTCGAATNGTACTGTTTTGGAACTGTTTGACTTTCCATTTTATTGTAAAATCCGGTT
                      ____________________________________________________________
consensus             AACCTCGAATCGTACTGTTCTGGAACTGTCTGACTTTCCATTTTATTGTAAAATCCGGTT