Contig 012824:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005J10Sequence509012824 (2)479012824 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF005J10+ GAATTAGACGGGTCTGTACGCGTAGGGTT
JMFF005J10- GAATTAGACGGGTCTGTACGCGTAGGGTT
                      ____________________________________________________________
consensus GAATTAGACGGGTCTGTACGCGTAGGGTT
 
. : . : . : . : . : . :
rJMFF005J10+ AAAGCGATGAAACTATAGGGAAGCTGTCGCATTGCACAATCACATTGAGAGAGAAACGAA
JMFF005J10- AAAGCGATGAAACTATAGGGAAGCTGTCGCATTGCACAATCACATTGAGAGAGAAACGAA
                      ____________________________________________________________
consensus AAAGCGATGAAACTATAGGGAAGCTGTCGCATTGCACAATCACATTGAGAGAGAAACGAA
 
. : . : . : . : . : . :
rJMFF005J10+ AACACAGAAGCCGAGTAGGTGAAGAGGTGGGTGCGACTACACAAACGGCAGCTATGGCGG
JMFF005J10- AACACAGAAGCCGAGTAGGTGAAGAGGTGGGTGCGACTACACAAACGGCAGCTATGGCGG
                      ____________________________________________________________
consensus AACACAGAAGCCGAGTAGGTGAAGAGGTGGGTGCGACTACACAAACGGCAGCTATGGCGG
 
. : . : . : . : . : . :
rJMFF005J10+ ACGGAACATATAGAAGAAGTAACCGGCGAGCATCCATTGAAGCAACGAGTAGACTCCTTG
JMFF005J10- ACGGAACATATAGAAGAAGTAACCGGCGAGCATCCATTGAAGCAACGAGTAGACTCCTTG
                      ____________________________________________________________
consensus ACGGAACATATAGAAGAAGTAACCGGCGAGCATCCATTGAAGCAACGAGTAGACTCCTTG
 
. : . : . : . : . : . :
rJMFF005J10+ CAGCAAAAAAAACAAAAAATCAAAGAAGTAACCACGAGAGGGTACAGTTTGGCATAACAC
JMFF005J10- CAGCAAAAAAAACAAAAAATCAAAGAAGTAACCACGAGAGGGTACAGTTTGGCATAACAC
                      ____________________________________________________________
consensus CAGCAAAAAAAACAAAAAATCAAAGAAGTAACCACGAGAGGGTACAGTTTGGCATAACAC
 
. : . : . : . : . : . :
rJMFF005J10+ CGATGACGATTTTGTTGATCCACCAGGGCAAGAATCAAGACAGGATAATTGATATGGAGC
JMFF005J10- CGATGACGATTTTGTTGATCCACCAGGGCAAGAATCAAGACAGGATAATTGATATGGAGC
                      ____________________________________________________________
consensus CGATGACGATTTTGTTGATCCACCAGGGCAAGAATCAAGACAGGATAATTGATATGGAGC
 
. : . : . : . : . : . :
rJMFF005J10+ TGGACACAATATGAATTTACAGCCGAAGAAGTTGGAGGGGATATGAATTTCTTTGCCATA
JMFF005J10- TGGACACAATATGAATTTACAGCCGAAGAAGTTGGAGGGGATATGAATTTCTTTGCCATA
                      ____________________________________________________________
consensus TGGACACAATATGAATTTACAGCCGAAGAAGTTGGAGGGGATATGAATTTCTTTGCCATA
 
. : . : . : . : . : . :
rJMFF005J10+ TGGGGTTTGTTAAACATATTAATTAAAACTGTGGAAACGTATTGCTTGGGATATGAATTT
JMFF005J10- TGGGGTTTGTTAAACATATTAATTAAAACTGTGGAAACGTATTGCTTGGGATATGAATTT
                      ____________________________________________________________
consensus TGGGGTTTGTTAAACATATTAATTAAAACTGTGGAAACGTATTGCTTGGGATATGAATTT
 
. : . : . : . : . : . :
rJMFF005J10+ ATTTTTTGTTGCACGGTCGGTTGTTTAACA
JMFF005J10- ATTTTTTGTTGCACGGTCGGTTGTTTAACAATGGTCTACATATTTTGGCGAAAAAAAAAA
                      ____________________________________________________________
consensus ATTTTTTGTTGCACGGTCGGTTGTTTAACAATGGTCTACATATTTTGGCGAAAAAAAAAA