Contig 012815:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H01Sequence516012815 (2)750012815 (2)ref|XP_009610244.1|5e-79PREDICTED: CASP-like protein 4A3 isoform X1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF004H01-                        ATAACCCCAATTTTGTTCAAGTTAGAAGCTAAGGATTTTACATATA
                      ____________________________________________________________
consensus                           ATAACCCCAATTTTGTTCAAGTTAGAAGCTAAGGATTTTACATATA
 
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rJMFF004H01-          TATTTCTTGAGAGCACACAAGTAGATTCCAAGTAATCAAGACTTCAAGAGTGTATGGATT
                      ____________________________________________________________
consensus             TATTTCTTGAGAGCACACAAGTAGATTCCAAGTAATCAAGACTTCAAGAGTGTATGGATT
 
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rJMFF004H01-          TGGAAGTGCAAAGAGCATAGCCCGAAATGAGAGAACTGAAAGCCATGGCAATAAATGCAA
                      ____________________________________________________________
consensus             TGGAAGTGCAAAGAGCATAGCCCGAAATGAGAGAACTGAAAGCCATGGCAATAAATGCAA
 
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rJMFF004H01-          GGAAGGACATTGTCACAGCTGCACTCGCCATATCCGGGAACTTATCCTTTCCCCAGTTCA
                      ____________________________________________________________
consensus             GGAAGGACATTGTCACAGCTGCACTCGCCATATCCGGGAACTTATCCTTTCCCCAGTTCA
 
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rJMFF004H01-          ACCGCCAATCATCAACTCGGGTAGCAGCTGAAGATGATGCTGATATCAGAAGGTACGTTA
                      ____________________________________________________________
consensus             ACCGCCAATCATCAACTCGGGTAGCAGCTGAAGATGATGCTGATATCAGAAGGTACGTTA
 
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rJMFF004H01-          TCGCCTGATCAATTGCAAAATCTGAGTAATGGCGCAATGGGTGCCGGAAAAAGTTGTTTC
                      ____________________________________________________________
consensus             TCGCCTGATCAATTGCAAAATCTGAGTAATGGCGCAATGGGTGCCGGAAAAAGTTGTTTC
 
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rJMFF004H01-          CAGTGGCAGAGTGGTAGATTAGATCAATTGCCTGTGCTCCTGAATACATAAATCCTATTG
                      ____________________________________________________________
consensus             CAGTGGCAGAGTGGTAGATTAGATCAATTGCCTGTGCTCCTGAATACATAAATCCTATTG
 
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rJMFF004H01-          CATTCACTGACAGAGAGTACCTGAACTCCTTGTAACGCTGGAAAGAATCAATAGCCCAGC
                      ____________________________________________________________
consensus             CATTCACTGACAGAGAGTACCTGAACTCCTTGTAACGCTGGAAAGAATCAATAGCCCAGC
 
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rJMFF004H01-          CCTGTTTCCGATCAGCCACCATGACGGAGAAGGAAACTAAACAGAACAGAAAACCAAAAA
                      ____________________________________________________________
consensus             CCTGTTTCCGATCAGCCACCATGACGGAGAAGGAAACTAAACAGAACAGAAAACCAAAAA
 
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rJMFF004H01-          TCCTAAAACCTAAGGCAGCTTTCTTCACCGTATTCTCTCTCCGGGAAATCTTCAAACTCG
                      ____________________________________________________________
consensus             TCCTAAAACCTAAGGCAGCTTTCTTCACCGTATTCTCTCTCCGGGAAATCTTCAAACTCG
 
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rJMFF004H01-          ACAACCTTTGCCGCAACCTCCGCCGTGTCTCGCCGCCGCCGCCGCCGACTCTGCCTCGGC
JMFF004H01+                                   GTGTCTCGCCGCCGCCGCCGCCGACTCTGCCTCGGC
                      ____________________________________________________________
consensus             ACAACCTTTGCCGCAACCTCCGCCGTGTCTCGCCGCCGCCGCCGCCGACTCTGCCTCGGC
 
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rJMFF004H01-          CAACATCTGTGGCAGCATGATCCACCTTGACCAAGGCCAAAGATTCATTCTTACGGACTT
JMFF004H01+           CAACATCTGTGGCAGCATGATCCACCTTGACCAAGGCCAAAGATTCATTCTTACGGACTT
                      ____________________________________________________________
consensus             CAACATCTGTGGCAGCATGATCCACCTTGACCAAGGCCAAAGATTCATTCTTACGGACTT
 
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rJMFF004H01-          CTTCACCTCCACCTCCGGCTTCGGATCCTTGCCCACTGGCGCAG                
JMFF004H01+           CTTCACCTCCACCTCCGGCTTCGGATCCTTGCCCACTGGCGCAGGGGGAGAAATAGATGC
                      ____________________________________________________________
consensus             CTTCACCTCCACCTCCGGCTTCGGATCCTTGCCCACTGGCGCAGGGGGAGAAATAGATGC
 
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JMFF004H01+           CTTTTCTTCCCTCGGAGACGATCCGTGTGTTAAATTACTTACACCGGATGAAATTGACGA
                      ____________________________________________________________
consensus             CTTTTCTTCCCTCGGAGACGATCCGTGTGTTAAATTACTTACACCGGATGAAATTGACGA
 
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JMFF004H01+           CCTCGGAGGTGATCCTCCCGGCGGAGAAGCTGGTTTATCAGCAACCGCATCTCCGCTAGC
                      ____________________________________________________________
consensus             CCTCGGAGGTGATCCTCCCGGCGGAGAAGCTGGTTTATCAGCAACCGCATCTCCGCTAGC
 
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JMFF004H01+           AGCATCCTTGCGATTACTAGCATTTTCCCTGGGGCTAGATTGTGAAGAATCTGAAGCAGT
                      ____________________________________________________________
consensus             AGCATCCTTGCGATTACTAGCATTTTCCCTGGGGCTAGATTGTGAAGAATCTGAAGCAGT
 
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JMFF004H01+           ATCTTCGCCGGATTCTTCCAACTCCAGGTGAGAACCCGTTTCTGTATGCTTAGGTACCGG
                      ____________________________________________________________
consensus             ATCTTCGCCGGATTCTTCCAACTCCAGGTGAGAACCCGTTTCTGTATGCTTAGGTACCGG
 
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JMFF004H01+           ATGAGAAACGGATTCTGGTTTTCCGGGTAGCGAAGGAGAAATGGATTCTGGTTTTCCGGG
                      ____________________________________________________________
consensus             ATGAGAAACGGATTCTGGTTTTCCGGGTAGCGAAGGAGAAATGGATTCTGGTTTTCCGGG
 
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JMFF004H01+           CACCGGGTGAGAAACGGGTTCTGGCTTGTCGGGCTCCATTTGGCTTCTACGAGAACATAC
                      ____________________________________________________________
consensus             CACCGGGTGAGAAACGGGTTCTGGCTTGTCGGGCTCCATTTGGCTTCTACGAGAACATAC