Contig 012812:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003P19Sequence518012812 (2)ref|XP_010033875.1|2e-25PREDICTED: mitochondrial arginine transporter BAC2-like [Eucalyptus grandis] gb742012812 (2)ref|XP_010033875.1|6e-12PREDICTED: mitochondrial arginine transporter BAC2-like [Eucalyptus grandis] gb

Alignment

This contig is upended


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rJMFF003P19-                                                  TCTTGACTTTATTATTAGAA
                      ____________________________________________________________
consensus                                                     TCTTGACTTTATTATTAGAA
 
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rJMFF003P19-          TACAATGGTTATTTTATATATATAGAAATTGTCACAATAAAAAGAAATGGGTGGTCCAGT
                      ____________________________________________________________
consensus             TACAATGGTTATTTTATATATATAGAAATTGTCACAATAAAAAGAAATGGGTGGTCCAGT
 
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rJMFF003P19-          GGGGTCCGCAATGAAAGAGGAAGTTGGGCGTTTCCTCATACTTCCCGCTCCCAACAAAAT
                      ____________________________________________________________
consensus             GGGGTCCGCAATGAAAGAGGAAGTTGGGCGTTTCCTCATACTTCCCGCTCCCAACAAAAT
 
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rJMFF003P19-          AGCAGCAGCGGTGGCCTCTGCTTCTGGGCTCTGGCAAATGGCAATCCCTTTTTTAGCAAA
                      ____________________________________________________________
consensus             AGCAGCAGCGGTGGCCTCTGCTTCTGGGCTCTGGCAAATGGCAATCCCTTTTTTAGCAAA
 
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rJMFF003P19-          CCGCAATAATCAGTTTTCAAGAACCAATCGCGCTCCCTTCCTCTGCACCAAAATTCATCT
                      ____________________________________________________________
consensus             CCGCAATAATCAGTTTTCAAGAACCAATCGCGCTCCCTTCCTCTGCACCAAAATTCATCT
 
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rJMFF003P19-          CCTCTAGCCTACCTAACAACCAACCAGTTCACATACACTCTAGATAAGCGATAAAATCTA
JMFF003P19+                               CAACCAGTTCACATACACTCTAGATAAGCGATAAAATCTA
                      ____________________________________________________________
consensus             CCTCTAGCCTACCTAACAACCAACCAGTTCACATACACTCTAGATAAGCGATAAAATCTA
 
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rJMFF003P19-          TTTTTACCCAACACAGTAATTTATTTATTTTTATACATTGGAAGATTGGATACGGAGAGT
JMFF003P19+           TTTTTACCCAACACAGTAATTTATTTATTTTTATACATTGGAAGATTGGATACGGAGAGT
                      ____________________________________________________________
consensus             TTTTTACCCAACACAGTAATTTATTTATTTTTATACATTGGAAGATTGGATACGGAGAGT
 
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rJMFF003P19-          GGCAGCAGATACCCATAAAGCCTAACAAGTGAGATCTTAGTGCTTACCTAGTTCTGTTGA
JMFF003P19+           GGCAGCAGATACCCATAAAGCCTAACAAGTGAGATCTTAGTGCTTACCTAGTTCTGTTGA
                      ____________________________________________________________
consensus             GGCAGCAGATACCCATAAAGCCTAACAAGTGAGATCTTAGTGCTTACCTAGTTCTGTTGA
 
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rJMFF003P19-          GCTTTGCTTGTTTTGGTTGGGGAATGGTAAGGAGGAAGGAGTGATGGATTTCTGGCCGGA
JMFF003P19+           GCTTTGCTTGTTTTGGTTGGGGAATGGTAAGGAGGAAGGAGTGATGGATTTCTGGCCGGA
                      ____________________________________________________________
consensus             GCTTTGCTTGTTTTGGTTGGGGAATGGTAAGGAGGAAGGAGTGATGGATTTCTGGCCGGA
 
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rJMFF003P19-          GTTTCTTGCAAGCAGTTGGGGGAAAGAGTTTGTGGCCGGAGGATTTGGGGGAACAGCCGG
JMFF003P19+           GTTTCTTGCAAGCAGTTGGGGGAAAGAGTTTGTGGCCGGAGGATTTGGGGGAACAGCCGG
                      ____________________________________________________________
consensus             GTTTCTTGCAAGCAGTTGGGGGAAAGAGTTTGTGGCCGGAGGATTTGGGGGAACAGCCGG
 
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rJMFF003P19-          TATCATAGCTGGTTATCCCCTCGACACAATCAGAATCCGGCAGCAGCAATCAGGAGCAGG
JMFF003P19+           TATCATAGCTGGTTATCCCCTCGACACAATCAGAATCCGGCAGCAGCAATCAGGAGCAGG
                      ____________________________________________________________
consensus             TATCATAGCTGGTTATCCCCTCGACACAATCAGAATCCGGCAGCAGCAATCAGGAGCAGG
 
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rJMFF003P19-          AGGTTCGGCTTACAGCATCCTAACGTGGGGTTGTTGGCTCTGAAGGTCCCCGGGCACTCT
JMFF003P19+           AGGTTCGGCTTACAGCATCCT-ACGTGGGGTTGTTGGCTCTGAAGGTCCCCGGGCACTCT
                      ____________________________________________________________
consensus             AGGTTCGGCTTACAGCATCCTAACGTGGGGTTGTTGGCTCTGAAGGTCCCCGGGCACTCT
 
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rJMFF003P19-          ACAGGGGGCATGGCTGCTCCCCTTGCCTCTGTCACCTTTCAGGTAAACTTCTTTACTTTT
JMFF003P19+           ACA-GGGGCATGGCTGCTCCCCTTGCCTCTGTCACCTTTCAGGTAAACTTCTTTACTTTT
                      ____________________________________________________________
consensus             ACAGGGGGCATGGCTGCTCCCCTTGCCTCTGTCACCTTTCAGGTAAACTTCTTTACTTTT
 
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rJMFF003P19-          CC                                                          
JMFF003P19+           CCCCCTTCACATTCTCTTTCACCAATTCAATCCCCCTGGTCTTTGACAGCATGCAGTAAT
                      ____________________________________________________________
consensus             CCCCCTTCACATTCTCTTTCACCAATTCAATCCCCCTGGTCTTTGACAGCATGCAGTAAT