Contig 012810:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C20Sequence593012810 (5)gb|KDO85584.1|2e-52hypothetical protein CISIN_1g014800mg [Citrus sinensis]715012316 (5)ref|XP_002275918.1|3e-54PREDICTED: dnaJ protein homolog 2 [Vitis vinifera]
JMFF025P20Sequence444012810 (5)gb|KDO85584.1|2e-53hypothetical protein CISIN_1g014800mg [Citrus sinensis]818012316 (5)emb|CDP09461.1|2e-83unnamed protein product [Coffea canephora]
JMFF047O06Sequence435012810 (5)gb|KDO85584.1|2e-53hypothetical protein CISIN_1g014800mg [Citrus sinensis]284012316 (5)
JMFS155A07Sequence615012810 (5)gb|KDO85584.1|3e-79hypothetical protein CISIN_1g014800mg [Citrus sinensis]
JMSF048J17Sequence700012810 (5)gb|KDO85584.1|3e-79hypothetical protein CISIN_1g014800mg [Citrus sinensis]759012316 (5)emb|CDP09461.1|1e-101unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF048J17+                TCATTCCAGTACCACGACACCCGTTGCATCTTCCAGTCGCTCCACTCTTTGAACC
JMFS155A07+                 CATTCCAGTACCACGACACCCGTTGCATCTTCCAGTCGCTCCACTCTTTGAACC
                      ____________________________________________________________
consensus                  TCATTCCAGTACCACGACACCCGTTGCATCTTCCAGTCGCTCCACTCTTTGAACC
 
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JMSF048J17+           TTTCCCTTTGCACTTGTGGCACAATTTGTTCCTGGAAAGCGAGAGCTTTTTAGTTGTGCC
JMFS155A07+           TTTCCCTTTGCACTTGTGGCACAATTTGTTCCTGGAAAGCGAGAGCTTTTTAGTTGTGCC
                      ____________________________________________________________
consensus             TTTCCCTTTGCACTTGTGGCACAATTTGTTCCTGGAAAGCGAGAGCTTTTTAGTTGTGCC
 
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JMSF048J17+           GTTATACAAATCTTCTAGAGAAACTCTAAGAGTATGTATTACATCTTCCCCTTGTCTCTT
JMFS155A07+           GTTATACAAATCTTCTAGAGAAACTCTAAGAGTATGTATTACATCTTCCCCTTGTCTCTT
                      ____________________________________________________________
consensus             GTTATACAAATCTTCTAGAGAAACTCTAAGAGTATGTATTACATCTTCCCCTTGTCTCTT
 
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JMSF048J17+           CCTGCTCCTCGAGCTGCTACCACCTCCAAATGGTCCGCCAAAGTGGGGACCACCCCCAAA
JMFS155A07+           CCTGCTCCTCGAGCTGCTACCACCTCCAAATGGTCCGCCAAAGTGGGGACCACCCCCAAA
                      ____________________________________________________________
consensus             CCTGCTCCTCGAGCTGCTACCACCTCCAAATGGTCCGCCAAAGTGGGGACCACCCCCAAA
 
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JMFF047O06+                     AAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
JMSF048J17+           TGATCCACCAAAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
JMFF025P20+                  CCAAAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
JMFS155A07+           TGATCCACCAAAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
JMFF003C20+                  CCAAAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
                      ____________________________________________________________
consensus             TGATCCACCAAAGAATGACTCAAAAATGTCAAAAGGACTATGGGCACCGGCACCCCCTCC
 
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JMFF047O06+           CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
JMSF048J17+           CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
JMFF025P20+           CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
JMFS155A07+           CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
JMFF003C20+           CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
                      ____________________________________________________________
consensus             CATTCCTTCTTTAAGGGCATCTTCGCCATACTGATCATAAACTTCTCTCTTTTCTGGATC
 
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JMFF047O06+           GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
JMSF048J17+           GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
JMFF025P20+           GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
JMFS155A07+           GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
JMFF003C20+           GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
                      ____________________________________________________________
consensus             GCTTAGAACTTCATAAGCTTGAGACAACTCCTTGAACTTCTCGGGATCTCCTCCCTTATC
 
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JMFF047O06+           AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
JMSF048J17+           AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
JMFF025P20+           AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
JMFS155A07+           AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
JMFF003C20+           AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
                      ____________________________________________________________
consensus             AGGATGATTCTTCATAGCCGCTTTTCTGTAGGCCTTCTTAAGCTCATCTTCGCTAGCACT
 
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JMFF047O06+           TTTCGAAACACCAAGAACCTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
JMSF048J17+           TTTCGAAACACCAAGAACCTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
JMFF025P20+           TTTCGAAACACCAAGAACCTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
JMFS155A07+           TTTCGAAACACCAAGAAACTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
JMFF003C20+           TTTCGAAACACCAAGAACCTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
                      ____________________________________________________________
consensus             TTTCGAAACACCAAGAACCTCATAGTATTTGGAGTTATCACCCCTTCGTGGACCCCTTCC
 
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JMFF047O06+           AAACATATTGGACGCCCTTTACTC                                    
JMSF048J17+           AAACATATTGGACGCCCTTTACTC                                    
JMFF025P20+           AAACATATTGGACGCCCTTTACTC                                    
JMFS155A07+           AAACATATTGGACGCCCTTTACTC-TGGAAAAAGGAGGAGTTGTAGAGAGAGAGAGAGAG
JMFF003C20+           AAACATATTGGACGCCCTTTACTCACGGAGTTTAGAAAAATCTTCACGCAATCGATTTAT
                      ____________________________________________________________
consensus             AAACATATTGGACGCCCTTTACTCATGGAGTTTGGAGGAGTTTTCGCGCGATCGATTTAT
 
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JMFS155A07+           GGAAAGGAGAGCGCTTTGG                                         
JMFF003C20+           GGGGGAAAGAGTTTCAATCTTTGCCAAACAGAACCATAAAGAGTAAAGACACCAGCTTTA
                      ____________________________________________________________
consensus             GGGGGGGAGAGTTTTTTTGTTTGCCAAACAGAACCATAAAGAGTAAAGACACCAGCTTTA
 
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JMFF003C20+           CACCCGAATTTCAATCTTAACCAAACACTCTTGAAGAAATCAATCGCTGAATCGACTGAC
                      ____________________________________________________________
consensus             CACCCGAATTTCAATCTTAACCAAACACTCTTGAAGAAATCAATCGCTGAATCGACTGAC
 
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JMFF003C20+           CCGAGAGAAGAACTAACAGAAAAGATGCTAAATTTCTTCAGGTCATCGAGTCGAAAAGCA
                      ____________________________________________________________
consensus             CCGAGAGAAGAACTAACAGAAAAGATGCTAAATTTCTTCAGGTCATCGAGTCGAAAAGCA
 
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JMFF003C20+           AATCGAGGAATCCAAATAGAGACAACGAAGAAGATGATGAATAAAGAAAGGCAAAGGGTT
                      ____________________________________________________________
consensus             AATCGAGGAATCCAAATAGAGACAACGAAGAAGATGATGAATAAAGAAAGGCAAAGGGTT