Contig 012807:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002C15Sequence496012807 (2)ref|XP_009793120.1|9e-48PREDICTED: protein GRIP-like isoform X2 [Nicotiana sylvestris]838002499 (2)ref|XP_009763380.1|6e-59PREDICTED: myosin type-2 heavy chain 1-like [Nicotiana sylvestris] ref|XP_009763
JMFF041H01Sequence642012807 (2)ref|XP_004235934.1|2e-67PREDICTED: factor of DNA methylation 1 [Solanum lycopersicum] ref|XP_010318733.1618002499 (2)ref|XP_009763380.1|2e-61PREDICTED: myosin type-2 heavy chain 1-like [Nicotiana sylvestris] ref|XP_009763

Alignment

This contig is upended


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JMFF041H01+ GCACTCAGCTTCAAAGGCATTCTCAAAAAGTATAGCATTTTTA
                      ____________________________________________________________
consensus GCACTCAGCTTCAAAGGCATTCTCAAAAAGTATAGCATTTTTA
 
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JMFF041H01+ TAACCATTCCAATCACTTTTTAATTTGATCACAACTTGGGAAGTCCGCGACTTATCATCA
                      ____________________________________________________________
consensus TAACCATTCCAATCACTTTTTAATTTGATCACAACTTGGGAAGTCCGCGACTTATCATCA
 
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JMFF041H01+ CAGAATATTTTCACCTCCTGAGCTTCATATTTGGAAAACCTTTTTAACCAATAATCTTCT
JMFF002C15+ TAACCAATAATCTTCT
                      ____________________________________________________________
consensus CAGAATATTTTCACCTCCTGAGCTTCATATTTGGAAAACCTTTTTAACCAATAATCTTCT
 
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JMFF041H01+ TCTTCTACTGCAGTCCCGTTTGCATTGTCCTTCGATACATTCACAACAATACCTGTCCAA
JMFF002C15+ TCTTCTACTGCAGTCCCGTTTGCATTGTCCTTCGATACATTCACAACAATACCTGTCCAA
                      ____________________________________________________________
consensus TCTTCTACTGCAGTCCCGTTTGCATTGTCCTTCGATACATTCACAACAATACCTGTCCAA
 
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JMFF041H01+ GGCCAACAATACAGATTATTATCTTCTGGTGCAACAGCACGCTGTGGCAGTGGCTCAGCT
JMFF002C15+ GGCCAACAATACAGATTATTATCTTCTGGTGCAACAGCACGCTGTGGCAGTGGCTCAGCT
                      ____________________________________________________________
consensus GGCCAACAATACAGATTATTATCTTCTGGTGCAACAGCACGCTGTGGCAGTGGCTCAGCT
 
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JMFF041H01+ TGATCTCCTAGATCGATCTCCAAATACTTTGCCAATGCCACATGGTTTGCTTTCTGTTTC
JMFF002C15+ TGATCTCCTAGATCGATCTCCAAATACTTTGCCAATGCCACATGGTTTGCTTTCTGTTTC
                      ____________________________________________________________
consensus TGATCTCCTAGATCGATCTCCAAATACTTTGCCAATGCCACATGGTTTGCTTTCTGTTTC
 
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JMFF041H01+ ACACTTCTGTTTGCAGAACCTTTGCCTACTCCTGTAGCATGCTGAAGGAGGTCCTTGTAC
JMFF002C15+ ACACTTCTGTTTGCAGAACCTTTGCCTACTCCTGTAGCATGCTGAAGGAGGTCCTTGTAC
                      ____________________________________________________________
consensus ACACTTCTGTTTGCAGAACCTTTGCCTACTCCTGTAGCATGCTGAAGGAGGTCCTTGTAC
 
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JMFF041H01+ TTGTAGTCTTGTTTCTTCTTTCCAGCACAGAACGGACATCTAAGGCACCCATTTGGACCC
JMFF002C15+ TTGTAGTCTTGTTTCTTCTTTCCAGCACAGAACGGACATCTAAGGCACCCATTTGGACCC
                      ____________________________________________________________
consensus TTGTAGTCTTGTTTCTTCTTTCCAGCACAGAACGGACATCTAAGGCACCCATTTGGACCC
 
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JMFF041H01+ TTTACTTTGTATTTACCTGACCTCAATTCCTCATAAGGTTTTTCTTTATACTCATTGATC
JMFF002C15+ TTTACTTTGTATTTACCTGACCTCAATTCCTCATAAGGTTTTTCTTTATACTCATTGATC
                      ____________________________________________________________
consensus TTTACTTTGTATTTACCTGACCTCAATTCCTCATAAGGTTTTTCTTTATACTCATTGATC
 
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JMFF041H01+ TCAGACTCACTCAAGTCCGATTCTTCATCTGAGCTACTCATCTTCTGCGAGTTCTTAGCA
JMFF002C15+ TCAGACTCACTCAAGTCCGATTCTTCATCTGAGCTACTCATCTTCTGCGAGTTCTTAGCA
                      ____________________________________________________________
consensus TCAGACTCACTCAAGTCCGATTCTTCATCTGAGCTACTCATCTTCTGCGAGTTCTTAGCA
 
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JMFF041H01+ ATGAAAGTCCAGAAATAATTGAGAGACTGAGAAATCCGAGTGACT
JMFF002C15+ ATGAAAGTCCAGAAATAATTGAGAGACTGAGAAATCCGAGTGACTGAGAAGAGGGGAAAT
                      ____________________________________________________________
consensus ATGAAAGTCCAGAAATAATTGAGAGACTGAGAAATCCGAGTGACTGAGAAGAGGGGAAAT